RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 SCO1O75880 301 aa9.52□□□□□ -0.89
VMA21-202ENST00000370361 LEPROTL1O95214 131 aa9.52□□□□□ -0.89
VMA21-202ENST00000370361 ZNF625Q96I27 306 aaPredicted RBP9.52□□□□□ -0.89
VMA21-202ENST00000370361 SND1-IT1Q9HBX3 110 aa9.52□□□□□ -0.89
VMA21-202ENST00000370361 VPREB1P12018 145 aa9.51□□□□□ -0.89
VMA21-202ENST00000370361 IGKV2-28A0A075B6P5 120 aa9.5□□□□□ -0.89
VMA21-202ENST00000370361 IGKV2D-28P01615 120 aa9.5□□□□□ -0.89
VMA21-202ENST00000370361 LPAP08519 4548 aa9.5□□□□□ -0.89
VMA21-202ENST00000370361 LCE2DQ5TA82 110 aaPredicted RBP9.49□□□□□ -0.89
VMA21-202ENST00000370361 A0A0U1RQV1 116 aa9.48□□□□□ -0.89
VMA21-202ENST00000370361 H0Y8G0 127 aa9.48□□□□□ -0.89
VMA21-202ENST00000370361 TMEM126AQ9H061 195 aa9.48□□□□□ -0.89
VMA21-202ENST00000370361 HSPB8Q9UJY1 196 aa9.48□□□□□ -0.89
VMA21-202ENST00000370361 IGKV2D-26A0A0A0MRZ7 120 aa9.47□□□□□ -0.89
VMA21-202ENST00000370361 TSPAN13O95857 204 aa9.47□□□□□ -0.89
VMA21-202ENST00000370361 FABP4P15090 132 aa9.47□□□□□ -0.89
VMA21-202ENST00000370361 HIST1H2BKO60814 126 aa9.46□□□□□ -0.9
VMA21-202ENST00000370361 HIST1H2BJP06899 126 aa9.46□□□□□ -0.9
VMA21-202ENST00000370361 HIST1H2BOP23527 126 aa9.46□□□□□ -0.9
VMA21-202ENST00000370361 HIST1H2BBP33778 126 aa9.46□□□□□ -0.9
VMA21-202ENST00000370361 HIST1H2BDP58876 126 aa9.46□□□□□ -0.9
VMA21-202ENST00000370361 HIST1H2BCP62807 126 aa9.46□□□□□ -0.9
VMA21-202ENST00000370361 HIST2H2BEQ16778 126 aa9.46□□□□□ -0.9
VMA21-202ENST00000370361 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.46□□□□□ -0.9
VMA21-202ENST00000370361 FAM19A1Q7Z5A9 133 aa9.46□□□□□ -0.9
VMA21-202ENST00000370361 LINC00304Q8N9R0 145 aa9.46□□□□□ -0.9
VMA21-202ENST00000370361 HIST1H2BHQ93079 126 aa9.46□□□□□ -0.9
VMA21-202ENST00000370361 HIST1H2BNQ99877 126 aa9.46□□□□□ -0.9
VMA21-202ENST00000370361 HIST1H2BMQ99879 126 aa9.46□□□□□ -0.9
VMA21-202ENST00000370361 LINC00587B1AMM8 73 aa9.44□□□□□ -0.9
VMA21-202ENST00000370361 M0R378 163 aa9.44□□□□□ -0.9
VMA21-202ENST00000370361 PLNP26678 52 aa9.44□□□□□ -0.9
VMA21-202ENST00000370361 KRTAP13-2Q52LG2 175 aa9.44□□□□□ -0.9
VMA21-202ENST00000370361 LINC00158P58513 81 aa9.43□□□□□ -0.9
VMA21-202ENST00000370361 PRLHP81277 87 aa9.43□□□□□ -0.9
VMA21-202ENST00000370361 DPM2O94777 84 aa9.42□□□□□ -0.9
VMA21-202ENST00000370361 HERV-K104P63124 156 aa9.42□□□□□ -0.9
VMA21-202ENST00000370361 Q8NDZ9 215 aa9.42□□□□□ -0.9
VMA21-202ENST00000370361 PMCHL2Q9BQD1 86 aa9.42□□□□□ -0.9
VMA21-202ENST00000370361 ZNF706Q9Y5V0 76 aaPredicted RBP9.42□□□□□ -0.9
VMA21-202ENST00000370361 TMEM238C9JI98 176 aa9.41□□□□□ -0.9
VMA21-202ENST00000370361 ATP6V1G1O75348 118 aa9.41□□□□□ -0.9
VMA21-202ENST00000370361 MAP1LC3CQ9BXW4 147 aa9.41□□□□□ -0.9
VMA21-202ENST00000370361 ANAPC11Q9NYG5 84 aa9.41□□□□□ -0.9
VMA21-202ENST00000370361 NDUFA12Q9UI09 145 aa9.41□□□□□ -0.9
VMA21-202ENST00000370361 A0A0U1RRA0 63 aa9.4□□□□□ -0.9
VMA21-202ENST00000370361 LEPROTO15243 131 aa9.4□□□□□ -0.9
VMA21-202ENST00000370361 IGKCP01834 107 aa9.4□□□□□ -0.9
VMA21-202ENST00000370361 SMIM13P0DJ93 91 aa9.4□□□□□ -0.9
VMA21-202ENST00000370361 TSPEAR-AS2P59090 65 aa9.4□□□□□ -0.9
VMA21-202ENST00000370361 SPAG11AQ6PDA7 123 aa9.4□□□□□ -0.9
VMA21-202ENST00000370361 PLEKHB2Q96CS7 222 aa9.4□□□□□ -0.9
VMA21-202ENST00000370361 MYMXA0A1B0GTQ4 84 aa9.39□□□□□ -0.91
VMA21-202ENST00000370361 PRYO14603 147 aa9.38□□□□□ -0.91
VMA21-202ENST00000370361 S100A12P80511 92 aa9.38□□□□□ -0.91
VMA21-202ENST00000370361 MEIG1Q5JSS6 88 aa9.38□□□□□ -0.91
VMA21-202ENST00000370361 J3QQQ9 107 aa9.37□□□□□ -0.91
VMA21-202ENST00000370361 HERVK_113P61574 105 aa9.37□□□□□ -0.91
VMA21-202ENST00000370361 TPRXLQ17RH7 258 aa9.37□□□□□ -0.91
VMA21-202ENST00000370361 HIGD2AQ9BW72 106 aa9.37□□□□□ -0.91
VMA21-202ENST00000370361 SYS1-DBNDD2H3BUS1 97 aa9.36□□□□□ -0.91
VMA21-202ENST00000370361 COA6Q5JTJ3 125 aaKnown RBP9.36□□□□□ -0.91
VMA21-202ENST00000370361 MIR7-3HGQ8N6C7 128 aa9.36□□□□□ -0.91
VMA21-202ENST00000370361 LINC00337Q8N6G1 96 aa9.35□□□□□ -0.91
VMA21-202ENST00000370361 NMUP48645 174 aa9.34□□□□□ -0.91
VMA21-202ENST00000370361 BOD1L2Q8IYS8 172 aa9.34□□□□□ -0.91
VMA21-202ENST00000370361 SPRR4Q96PI1 79 aa9.34□□□□□ -0.91
VMA21-202ENST00000370361 KCNQ1DNQ9H478 68 aa9.34□□□□□ -0.91
VMA21-202ENST00000370361 SPRR1AP35321 89 aa9.33□□□□□ -0.92
VMA21-202ENST00000370361 LINC01545Q5VT33 79 aa9.33□□□□□ -0.92
VMA21-202ENST00000370361 IGLV7-46A0A075B6I9 117 aa9.32□□□□□ -0.92
VMA21-202ENST00000370361 E9PLD3 99 aa9.32□□□□□ -0.92
VMA21-202ENST00000370361 LGALS3P17931 250 aaKnown RBP9.32□□□□□ -0.92
VMA21-202ENST00000370361 C4orf48Q5BLP8 95 aa9.32□□□□□ -0.92
VMA21-202ENST00000370361 PET117Q6UWS5 81 aa9.32□□□□□ -0.92
VMA21-202ENST00000370361 CDIP1Q9H305 208 aa9.32□□□□□ -0.92
VMA21-202ENST00000370361 LOC107984156A0A0G2JMH3 177 aa9.31□□□□□ -0.92
VMA21-202ENST00000370361 FP248Q71RG6 208 aaPredicted RBP9.31□□□□□ -0.92
VMA21-202ENST00000370361 ARL17AQ8IVW1 177 aa9.31□□□□□ -0.92
VMA21-202ENST00000370361 ETDCA0A1B0GVM5 59 aa9.3□□□□□ -0.92
VMA21-202ENST00000370361 C3orf79P0CE67 100 aa9.3□□□□□ -0.92
VMA21-202ENST00000370361 RETNLBQ9BQ08 111 aa9.3□□□□□ -0.92
VMA21-202ENST00000370361 C3orf22Q8N5N4 141 aa9.29□□□□□ -0.92
VMA21-202ENST00000370361 DAND5Q8N907 189 aa9.29□□□□□ -0.92
VMA21-202ENST00000370361 TRBV10-2A0A0K0K1G8 114 aa9.28□□□□□ -0.92
VMA21-202ENST00000370361 NCR3O14931 201 aa9.28□□□□□ -0.92
VMA21-202ENST00000370361 S100A1P23297 94 aa9.28□□□□□ -0.92
VMA21-202ENST00000370361 MUC2Q02817 5179 aa9.27□□□□□ -0.92
VMA21-202ENST00000370361 KRTAP4-16G5E9R7 235 aaPredicted RBP9.27□□□□□ -0.93
VMA21-202ENST00000370361 A0A0J9YXY3 114 aa9.26□□□□□ -0.93
VMA21-202ENST00000370361 SPINK1P00995 79 aa9.26□□□□□ -0.93
VMA21-202ENST00000370361 LINC00483Q53H64 154 aa9.26□□□□□ -0.93
VMA21-202ENST00000370361 MIEN1Q9BRT3 115 aa9.26□□□□□ -0.93
VMA21-202ENST00000370361 TRBV10-3A0A0K0K1G6 114 aa9.25□□□□□ -0.93
VMA21-202ENST00000370361 KRTDAPP60985 99 aa9.25□□□□□ -0.93
VMA21-202ENST00000370361 PPDPFQ9H3Y8 114 aa9.25□□□□□ -0.93
VMA21-202ENST00000370361 ADAMTSL4-AS1Q5T5F5 129 aa9.24□□□□□ -0.93
VMA21-202ENST00000370361 SMCR5Q8TEV8 140 aa9.24□□□□□ -0.93
VMA21-202ENST00000370361 SPANXB1Q9NS25 103 aaPredicted RBP9.24□□□□□ -0.93
VMA21-202ENST00000370361 NDUFC2O95298 119 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms