RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 Q6JHZ5 121 aa8.22□□□□□ -1.09
USF1-203ENST00000368021 IGHV1-58A0A0C4DH39 117 aa8.21□□□□□ -1.1
USF1-203ENST00000368021 TIMM17BO60830 172 aa8.21□□□□□ -1.1
USF1-203ENST00000368021 ANGP03950 147 aaKnown RBP8.21□□□□□ -1.1
USF1-203ENST00000368021 ATP5EP2Q5VTU8 51 aa8.21□□□□□ -1.1
USF1-203ENST00000368021 HRCT1Q6UXD1 115 aa8.21□□□□□ -1.1
USF1-203ENST00000368021 LINC00269Q8N2A0 174 aa8.21□□□□□ -1.1
USF1-203ENST00000368021 hADV29S1A0JD25 119 aa8.2□□□□□ -1.1
USF1-203ENST00000368021 NUPR2A6NF83 97 aa8.2□□□□□ -1.1
USF1-203ENST00000368021 PFN2P35080 140 aa8.2□□□□□ -1.1
USF1-203ENST00000368021 SS18Q15532 418 aa8.2□□□□□ -1.1
USF1-203ENST00000368021 Q8N3U1 123 aa8.2□□□□□ -1.1
USF1-203ENST00000368021 PRR34Q9NV39 138 aa8.2□□□□□ -1.1
USF1-203ENST00000368021 IGHV3OR16-9A0A0B4J2B5 98 aa8.19□□□□□ -1.1
USF1-203ENST00000368021 IGKV3OR2-268A0A0C4DH90 116 aa8.19□□□□□ -1.1
USF1-203ENST00000368021 EPM2AB3EWF7 344 aa8.19□□□□□ -1.1
USF1-203ENST00000368021 REG3AQ06141 175 aa8.19□□□□□ -1.1
USF1-203ENST00000368021 WFDC10BQ8IUB3 73 aa8.19□□□□□ -1.1
USF1-203ENST00000368021 C1orf43Q9BWL3 253 aa8.19□□□□□ -1.1
USF1-203ENST00000368021 IGHV3-30-3P0DP02 117 aa8.19□□□□□ -1.1
USF1-203ENST00000368021 RYR2Q92736 4967 aa8.19□□□□□ -1.1
USF1-203ENST00000368021 SMIM26A0A096LP01 95 aa8.18□□□□□ -1.1
USF1-203ENST00000368021 IGLV5-39A0A0G2JS06 123 aa8.18□□□□□ -1.1
USF1-203ENST00000368021 CCL18P55774 89 aa8.18□□□□□ -1.1
USF1-203ENST00000368021 TSPEAR-AS2P59090 65 aa8.18□□□□□ -1.1
USF1-203ENST00000368021 LINC01556Q5JQF7 62 aa8.18□□□□□ -1.1
USF1-203ENST00000368021 MUSTN1Q8IVN3 82 aa8.18□□□□□ -1.1
USF1-203ENST00000368021 UPK3BQ9BT76 320 aa8.18□□□□□ -1.1
USF1-203ENST00000368021 KLK5Q9Y337 293 aaPredicted RBP8.18□□□□□ -1.1
USF1-203ENST00000368021 A0A087WZ39 114 aa8.17□□□□□ -1.1
USF1-203ENST00000368021 TRAV8-3A0A0A6YYJ7 113 aa8.17□□□□□ -1.1
USF1-203ENST00000368021 SMIM1B2RUZ4 78 aa8.17□□□□□ -1.1
USF1-203ENST00000368021 CLPSL2Q6UWE3 100 aa8.17□□□□□ -1.1
USF1-203ENST00000368021 IGHV3-64A0A075B6Q5 118 aa8.17□□□□□ -1.1
USF1-203ENST00000368021 C4orf26Q17RF5 130 aa8.17□□□□□ -1.1
USF1-203ENST00000368021 KLK12Q9UKR0 248 aa8.17□□□□□ -1.1
USF1-203ENST00000368021 LINC00588Q9Y4M8 146 aa8.17□□□□□ -1.1
USF1-203ENST00000368021 DNAH10OSP0CZ25 163 aa8.16□□□□□ -1.1
USF1-203ENST00000368021 CD164L2Q6UWJ8 174 aa8.16□□□□□ -1.1
USF1-203ENST00000368021 LINC01561Q8N1V8 128 aa8.16□□□□□ -1.1
USF1-203ENST00000368021 XCL1P47992 114 aa8.15□□□□□ -1.1
USF1-203ENST00000368021 CHCHD10Q8WYQ3 142 aaPredicted RBP8.15□□□□□ -1.1
USF1-203ENST00000368021 KMT2AQ03164 3969 aa8.15□□□□□ -1.1
USF1-203ENST00000368021 FAM236DA0A1B0GTK5 79 aa8.15□□□□□ -1.11
USF1-203ENST00000368021 CRPP02741 224 aa8.15□□□□□ -1.11
USF1-203ENST00000368021 FAM236CP0DP71 79 aa8.15□□□□□ -1.11
USF1-203ENST00000368021 ENHOQ6UWT2 76 aa8.15□□□□□ -1.11
USF1-203ENST00000368021 APLNQ9ULZ1 77 aa8.15□□□□□ -1.11
USF1-203ENST00000368021 COX7A2LO14548 114 aa8.14□□□□□ -1.11
USF1-203ENST00000368021 NDUFC1O43677 76 aa8.14□□□□□ -1.11
USF1-203ENST00000368021 MIAQ16674 131 aa8.14□□□□□ -1.11
USF1-203ENST00000368021 C1orf195Q5TG92 126 aa8.14□□□□□ -1.11
USF1-203ENST00000368021 H7C2G1 150 aa8.13□□□□□ -1.11
USF1-203ENST00000368021 LY6G6CO95867 125 aa8.13□□□□□ -1.11
USF1-203ENST00000368021 NDUFA12Q9UI09 145 aa8.13□□□□□ -1.11
USF1-203ENST00000368021 DNAH1Q9P2D7 4330 aa8.13□□□□□ -1.11
USF1-203ENST00000368021 TRBV10-3A0A0K0K1G6 114 aa8.13□□□□□ -1.11
USF1-203ENST00000368021 C6orf226Q5I0X4 101 aa8.13□□□□□ -1.11
USF1-203ENST00000368021 IGLV10-54A0A075B6I4 117 aa8.12□□□□□ -1.11
USF1-203ENST00000368021 LCE6AA0A183 80 aa8.12□□□□□ -1.11
USF1-203ENST00000368021 NDUFA1O15239 70 aa8.12□□□□□ -1.11
USF1-203ENST00000368021 DNAL4O96015 105 aa8.11□□□□□ -1.11
USF1-203ENST00000368021 CIRBPQ14011 172 aaKnown RBP8.11□□□□□ -1.11
USF1-203ENST00000368021 COX7B2Q8TF08 81 aa8.1□□□□□ -1.11
USF1-203ENST00000368021 DSCR8Q96T75 97 aa8.1□□□□□ -1.11
USF1-203ENST00000368021 VPS13DQ5THJ4 4388 aa8.1□□□□□ -1.11
USF1-203ENST00000368021 LINC00476Q8WZB0 136 aa8.1□□□□□ -1.11
USF1-203ENST00000368021 ZNF625Q96I27 306 aaPredicted RBP8.1□□□□□ -1.11
USF1-203ENST00000368021 ALMS1Q8TCU4 4167 aa8.09□□□□□ -1.11
USF1-203ENST00000368021 USP17L23D6RBM5 183 aa8.09□□□□□ -1.11
USF1-203ENST00000368021 SMCR5Q8TEV8 140 aa8.09□□□□□ -1.11
USF1-203ENST00000368021 Q9H8V8 135 aa8.09□□□□□ -1.11
USF1-203ENST00000368021 IBA57-AS1B1ANH7 110 aa8.08□□□□□ -1.12
USF1-203ENST00000368021 Q8IZM0 81 aa8.08□□□□□ -1.12
USF1-203ENST00000368021 EIF4EBP3O60516 100 aaPredicted RBP8.08□□□□□ -1.12
USF1-203ENST00000368021 KRTAP26-1Q6PEX3 210 aa8.08□□□□□ -1.12
USF1-203ENST00000368021 TOMM7Q9P0U1 55 aa8.07□□□□□ -1.12
USF1-203ENST00000368021 PRSS2P07478 247 aa8.06□□□□□ -1.12
USF1-203ENST00000368021 LINC00336Q6ZUF6 198 aa8.06□□□□□ -1.12
USF1-203ENST00000368021 UBE2DNLQ8IWF7 75 aa8.06□□□□□ -1.12
USF1-203ENST00000368021 LITAFQ99732 161 aa8.06□□□□□ -1.12
USF1-203ENST00000368021 BAALC-AS2P0C853 105 aa8.06□□□□□ -1.12
USF1-203ENST00000368021 OXTP01178 125 aa8.05□□□□□ -1.12
USF1-203ENST00000368021 KIAA0087Q14695 138 aa8.05□□□□□ -1.12
USF1-203ENST00000368021 CLEC2BQ92478 149 aa8.04□□□□□ -1.12
USF1-203ENST00000368021 IGKV2D-24A0A075B6R9 120 aa8.03□□□□□ -1.12
USF1-203ENST00000368021 RMI2Q96E14 147 aa8.03□□□□□ -1.12
USF1-203ENST00000368021 TRAV7A0A075B6U4 112 aa8.02□□□□□ -1.13
USF1-203ENST00000368021 KLKP1Q107X0 134 aa8.02□□□□□ -1.13
USF1-203ENST00000368021 ADAMTSL4-AS1Q5T5F5 129 aa8.02□□□□□ -1.13
USF1-203ENST00000368021 Q9HAA7 133 aa8.02□□□□□ -1.13
USF1-203ENST00000368021 FRAS1Q86XX4 4008 aa8.02□□□□□ -1.13
USF1-203ENST00000368021 H0YGX0 51 aa8.01□□□□□ -1.13
USF1-203ENST00000368021 SPAG11BQ08648 103 aa8.01□□□□□ -1.13
USF1-203ENST00000368021 OBSCN-AS1Q96MR7 158 aa8.01□□□□□ -1.13
USF1-203ENST00000368021 PKIGQ9Y2B9 76 aa8□□□□□ -1.13
USF1-203ENST00000368021 TRAV13-2A0A0B4J235 113 aa7.99□□□□□ -1.13
USF1-203ENST00000368021 C15orf56Q8N910 161 aa7.99□□□□□ -1.13
USF1-203ENST00000368021 KRTAP1-5Q9BYS1 174 aa7.99□□□□□ -1.13
USF1-203ENST00000368021 DNAH2Q9P225 4427 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 348.2 ms