RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 Q6ZSN1 163 aa2.64□□□□□ -1.99
SYNE1-207ENST00000367255 DEFB112Q30KQ8 113 aa2.64□□□□□ -1.99
SYNE1-207ENST00000367255 C10orf99Q6UWK7 81 aa2.64□□□□□ -1.99
SYNE1-207ENST00000367255 ADAMTS20P59510 1910 aa2.64□□□□□ -1.99
SYNE1-207ENST00000367255 CAMK2N1Q7Z7J9 78 aa2.64□□□□□ -1.99
SYNE1-207ENST00000367255 SPAG11AQ6PDA7 123 aa2.64□□□□□ -1.99
SYNE1-207ENST00000367255 ATRQ13535 2644 aa2.64□□□□□ -1.99
SYNE1-207ENST00000367255 IGLV8-61A0A075B6I0 122 aa2.64□□□□□ -1.99
SYNE1-207ENST00000367255 DSCAMO60469 2012 aa2.64□□□□□ -1.99
SYNE1-207ENST00000367255 IGKV4-1P06312 121 aa2.63□□□□□ -1.99
SYNE1-207ENST00000367255 Q8NA96 180 aa2.63□□□□□ -1.99
SYNE1-207ENST00000367255 SPRR4Q96PI1 79 aa2.63□□□□□ -1.99
SYNE1-207ENST00000367255 URB1-AS1Q96HZ7 61 aa2.63□□□□□ -1.99
SYNE1-207ENST00000367255 Q6ZTC4 211 aa2.63□□□□□ -1.99
SYNE1-207ENST00000367255 C6orf48Q9UBA6 75 aa2.63□□□□□ -1.99
SYNE1-207ENST00000367255 LINC00588Q9Y4M8 146 aa2.63□□□□□ -1.99
SYNE1-207ENST00000367255 LITAFQ99732 161 aa2.63□□□□□ -1.99
SYNE1-207ENST00000367255 Q6YL49 198 aa2.63□□□□□ -1.99
SYNE1-207ENST00000367255 C18orf65Q6ZTR6 163 aa2.63□□□□□ -1.99
SYNE1-207ENST00000367255 REG3GQ6UW15 175 aa2.63□□□□□ -1.99
SYNE1-207ENST00000367255 EXPH5Q8NEV8 1989 aa2.62□□□□□ -1.99
SYNE1-207ENST00000367255 ATG2AQ2TAZ0 1938 aa2.62□□□□□ -1.99
SYNE1-207ENST00000367255 K7EQZ3 153 aa2.62□□□□□ -1.99
SYNE1-207ENST00000367255 NUPR2A6NF83 97 aa2.62□□□□□ -1.99
SYNE1-207ENST00000367255 OCR1Q9BZK8 76 aa2.62□□□□□ -1.99
SYNE1-207ENST00000367255 NCOA6Q14686 2063 aaPredicted RBP2.62□□□□□ -1.99
SYNE1-207ENST00000367255 A0A0G2JQZ4 141 aa2.62□□□□□ -1.99
SYNE1-207ENST00000367255 A0A1W2PNN7 141 aa2.62□□□□□ -1.99
SYNE1-207ENST00000367255 FLNBO75369 2602 aaKnown RBP2.62□□□□□ -1.99
SYNE1-207ENST00000367255 Q6ZPA2 131 aa2.62□□□□□ -1.99
SYNE1-207ENST00000367255 LMO4P61968 165 aa2.61□□□□□ -1.99
SYNE1-207ENST00000367255 AGRNO00468 2067 aa2.61□□□□□ -1.99
SYNE1-207ENST00000367255 LINC00612Q8N6U2 182 aa2.61□□□□□ -1.99
SYNE1-207ENST00000367255 ZNF575Q86XF7 245 aa2.61□□□□□ -1.99
SYNE1-207ENST00000367255 PRR34Q9NV39 138 aa2.61□□□□□ -1.99
SYNE1-207ENST00000367255 MAP6D1Q9H9H5 199 aa2.61□□□□□ -1.99
SYNE1-207ENST00000367255 IGF2RP11717 2491 aa2.61□□□□□ -1.99
SYNE1-207ENST00000367255 CYSRT1A8MQ03 144 aa2.61□□□□□ -1.99
SYNE1-207ENST00000367255 SMIM29Q86T20 159 aa2.61□□□□□ -1.99
SYNE1-207ENST00000367255 IGLV4-60A0A075B6I1 120 aa2.61□□□□□ -1.99
SYNE1-207ENST00000367255 CPAMD8Q8IZJ3 1885 aa2.61□□□□□ -1.99
SYNE1-207ENST00000367255 LINC00315P59091 139 aa2.61□□□□□ -1.99
SYNE1-207ENST00000367255 C11orf21Q9P2W6 132 aa2.61□□□□□ -1.99
SYNE1-207ENST00000367255 NBEAL1Q6ZS30 2694 aa2.61□□□□□ -1.99
SYNE1-207ENST00000367255 RBM12B-AS1Q9P1G2 102 aa2.61□□□□□ -1.99
SYNE1-207ENST00000367255 IGLV1-51P01701 117 aa2.6□□□□□ -1.99
SYNE1-207ENST00000367255 C15orf56Q8N910 161 aa2.6□□□□□ -1.99
SYNE1-207ENST00000367255 A0A1B0GU69 56 aa2.6□□□□□ -1.99
SYNE1-207ENST00000367255 PRRC2AP48634 2157 aaKnown RBP2.6□□□□□ -1.99
SYNE1-207ENST00000367255 RNF223E7ERA6 249 aa2.6□□□□□ -1.99
SYNE1-207ENST00000367255 NOTCH4Q99466 2003 aa2.6□□□□□ -1.99
SYNE1-207ENST00000367255 SLURP1P55000 103 aa2.6□□□□□ -1.99
SYNE1-207ENST00000367255 FAM19A1Q7Z5A9 133 aa2.6□□□□□ -1.99
SYNE1-207ENST00000367255 IGLV7-46A0A075B6I9 117 aa2.6□□□□□ -1.99
SYNE1-207ENST00000367255 LCE6AA0A183 80 aa2.6□□□□□ -1.99
SYNE1-207ENST00000367255 SMCPP49901 116 aaPredicted RBP2.6□□□□□ -1.99
SYNE1-207ENST00000367255 WFDC13Q8IUB5 93 aa2.6□□□□□ -1.99
SYNE1-207ENST00000367255 CNBPP62633 177 aaKnown RBP2.6□□□□□ -1.99
SYNE1-207ENST00000367255 LUZP6Q538Z0 58 aa2.59□□□□□ -1.99
SYNE1-207ENST00000367255 Q8NAQ8 132 aa2.59□□□□□ -1.99
SYNE1-207ENST00000367255 A0A0A0MQY5 61 aa2.59□□□□□ -1.99
SYNE1-207ENST00000367255 SEC61BP60468 96 aaKnown RBP2.59□□□□□ -1.99
SYNE1-207ENST00000367255 TECTAO75443 2155 aa2.59□□□□□ -1.99
SYNE1-207ENST00000367255 PIEZO2Q9H5I5 2752 aa2.59□□□□□ -1.99
SYNE1-207ENST00000367255 MGAM2Q2M2H8 2515 aa2.59□□□□□ -1.99
SYNE1-207ENST00000367255 C16orf90A8MZG2 172 aa2.59□□□□□ -1.99
SYNE1-207ENST00000367255 WDR87Q6ZQQ6 2873 aa2.59□□□□□ -2
SYNE1-207ENST00000367255 Q5XG85 94 aa2.59□□□□□ -2
SYNE1-207ENST00000367255 SSBP3-AS1Q7Z2R9 100 aa2.59□□□□□ -2
SYNE1-207ENST00000367255 RPS29P62273 56 aaKnown RBP2.58□□□□□ -2
SYNE1-207ENST00000367255 UBE2DNLQ8IWF7 75 aa2.58□□□□□ -2
SYNE1-207ENST00000367255 MAST4O15021 2626 aa2.58□□□□□ -2
SYNE1-207ENST00000367255 DNAH10OSP0CZ25 163 aa2.58□□□□□ -2
SYNE1-207ENST00000367255 LINC01558Q9Y6Z2 57 aa2.58□□□□□ -2
SYNE1-207ENST00000367255 CHTF8P0CG12 524 aa2.58□□□□□ -2
SYNE1-207ENST00000367255 LINC01554Q52M75 96 aa2.58□□□□□ -2
SYNE1-207ENST00000367255 LINC01006Q8NI28 216 aa2.58□□□□□ -2
SYNE1-207ENST00000367255 SPRR1BP22528 89 aa2.58□□□□□ -2
SYNE1-207ENST00000367255 IGHV6-1A0A0B4J1U7 121 aa2.58□□□□□ -2
SYNE1-207ENST00000367255 IGKV2D-24A0A075B6R9 120 aa2.58□□□□□ -2
SYNE1-207ENST00000367255 A0A1W2PNU3 283 aaPredicted RBP2.57□□□□□ -2
SYNE1-207ENST00000367255 LINC00528Q8N1L1 170 aa2.57□□□□□ -2
SYNE1-207ENST00000367255 PCSK5Q92824 1860 aa2.57□□□□□ -2
SYNE1-207ENST00000367255 CRIPTQ9P021 101 aa2.57□□□□□ -2
SYNE1-207ENST00000367255 A0A087WVE0 104 aa2.57□□□□□ -2
SYNE1-207ENST00000367255 CENPEQ02224 2701 aa2.56□□□□□ -2
SYNE1-207ENST00000367255 F8W735 103 aaPredicted RBP2.56□□□□□ -2
SYNE1-207ENST00000367255 FAM229BQ4G0N7 80 aa2.56□□□□□ -2
SYNE1-207ENST00000367255 IGLV1-50A0A075B6I6 118 aa2.56□□□□□ -2
SYNE1-207ENST00000367255 FHL2Q14192 279 aa2.56□□□□□ -2
SYNE1-207ENST00000367255 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.56□□□□□ -2
SYNE1-207ENST00000367255 PRR9Q5T870 116 aa2.56□□□□□ -2
SYNE1-207ENST00000367255 LRP4O75096 1905 aa2.55□□□□□ -2
SYNE1-207ENST00000367255 C11orf45Q8TAV5 145 aa2.55□□□□□ -2
SYNE1-207ENST00000367255 TSPEAR-AS2P59090 65 aa2.55□□□□□ -2
SYNE1-207ENST00000367255 LY6G6CO95867 125 aa2.55□□□□□ -2
SYNE1-207ENST00000367255 A0A087WYN8 130 aa2.55□□□□□ -2
SYNE1-207ENST00000367255 MRPL34Q9BQ48 92 aaKnown RBP2.55□□□□□ -2
SYNE1-207ENST00000367255 USP24Q9UPU5 2620 aa2.55□□□□□ -2
SYNE1-207ENST00000367255 COL6A5A8TX70 2615 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms