RNA–Protein interactions for RNA: ENST00000359524.7

RUNX2-201, Transcript of runt related transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene RUNX2, Length 5,390 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX2-201ENST00000359524 SPINK1P00995 79 aa11.84□□□□□ -0.51
RUNX2-201ENST00000359524 MYO9AB2RTY4 2548 aa11.84□□□□□ -0.51
RUNX2-201ENST00000359524 C11orf72Q8NBR9 251 aa11.83□□□□□ -0.51
RUNX2-201ENST00000359524 IGLV5-45A0A087WSX0 123 aa11.82□□□□□ -0.52
RUNX2-201ENST00000359524 SBSPONQ8IVN8 264 aa11.82□□□□□ -0.52
RUNX2-201ENST00000359524 SONP18583 2426 aaKnown RBP11.82□□□□□ -0.52
RUNX2-201ENST00000359524 SPATA3Q8NHX4 192 aa11.82□□□□□ -0.52
RUNX2-201ENST00000359524 USP9YO00507 2555 aaPredicted RBP11.82□□□□□ -0.52
RUNX2-201ENST00000359524 Q6ZSN1 163 aa11.82□□□□□ -0.52
RUNX2-201ENST00000359524 C7orf65Q6ZTY9 151 aa11.82□□□□□ -0.52
RUNX2-201ENST00000359524 A0A0C4DFX4 3053 aa11.81□□□□□ -0.52
RUNX2-201ENST00000359524 IGHV3OR16-9A0A0B4J2B5 98 aa11.81□□□□□ -0.52
RUNX2-201ENST00000359524 LOC110117498A0A087WWA1 95 aa11.81□□□□□ -0.52
RUNX2-201ENST00000359524 EDN2P20800 178 aa11.81□□□□□ -0.52
RUNX2-201ENST00000359524 USP9XQ93008 2570 aaPredicted RBP11.8□□□□□ -0.52
RUNX2-201ENST00000359524 KIAA0087Q14695 138 aa11.79□□□□□ -0.52
RUNX2-201ENST00000359524 CDIP1Q9H305 208 aa11.79□□□□□ -0.52
RUNX2-201ENST00000359524 SPAG11AQ6PDA7 123 aa11.78□□□□□ -0.52
RUNX2-201ENST00000359524 TLN2Q9Y4G6 2542 aa11.78□□□□□ -0.52
RUNX2-201ENST00000359524 XIRP2A4UGR9 3374 aa11.78□□□□□ -0.52
RUNX2-201ENST00000359524 PRRC2AP48634 2157 aaKnown RBP11.78□□□□□ -0.52
RUNX2-201ENST00000359524 FHL3Q13643 280 aa11.78□□□□□ -0.52
RUNX2-201ENST00000359524 SMIM29Q86T20 159 aa11.78□□□□□ -0.52
RUNX2-201ENST00000359524 ZFYVE26Q68DK2 2539 aa11.77□□□□□ -0.52
RUNX2-201ENST00000359524 PRLHP81277 87 aa11.77□□□□□ -0.53
RUNX2-201ENST00000359524 ELOF1P60002 83 aaKnown RBP11.77□□□□□ -0.53
RUNX2-201ENST00000359524 IGKV2D-30A0A075B6S6 120 aa11.76□□□□□ -0.53
RUNX2-201ENST00000359524 IGKV2-30P06310 120 aa11.76□□□□□ -0.53
RUNX2-201ENST00000359524 RETNLBQ9BQ08 111 aa11.76□□□□□ -0.53
RUNX2-201ENST00000359524 Q8NBF4 154 aa11.75□□□□□ -0.53
RUNX2-201ENST00000359524 FAM19A4Q96LR4 140 aa11.75□□□□□ -0.53
RUNX2-201ENST00000359524 ABCA2Q9BZC7 2435 aa11.75□□□□□ -0.53
RUNX2-201ENST00000359524 PKD1L2Q7Z442 2459 aa11.75□□□□□ -0.53
RUNX2-201ENST00000359524 C6orf48Q9UBA6 75 aa11.74□□□□□ -0.53
RUNX2-201ENST00000359524 ZNF462Q96JM2 2506 aa11.74□□□□□ -0.53
RUNX2-201ENST00000359524 LRRK2Q5S007 2527 aa11.74□□□□□ -0.53
RUNX2-201ENST00000359524 TET2Q6N021 2002 aaPredicted RBP11.73□□□□□ -0.53
RUNX2-201ENST00000359524 LINC00167Q96N53 147 aa11.73□□□□□ -0.53
RUNX2-201ENST00000359524 KRTAP10-9P60411 292 aa11.72□□□□□ -0.53
RUNX2-201ENST00000359524 C8orf87E5RJ46 101 aa11.71□□□□□ -0.53
RUNX2-201ENST00000359524 DEFB116Q30KQ4 102 aa11.71□□□□□ -0.53
RUNX2-201ENST00000359524 MOBPQ13875 183 aa11.7□□□□□ -0.54
RUNX2-201ENST00000359524 LOC101927531A0A1B0GV80 90 aa11.7□□□□□ -0.54
RUNX2-201ENST00000359524 TRAV22A0A0B4J277 110 aa11.69□□□□□ -0.54
RUNX2-201ENST00000359524 ERC2-IT1O76042 136 aa11.69□□□□□ -0.54
RUNX2-201ENST00000359524 LINC00315P59091 139 aa11.68□□□□□ -0.54
RUNX2-201ENST00000359524 Q6ZQT0 140 aa11.68□□□□□ -0.54
RUNX2-201ENST00000359524 Q6ZRX8 168 aa11.68□□□□□ -0.54
RUNX2-201ENST00000359524 GVQW2A0A096LPI5 108 aaPredicted RBP11.66□□□□□ -0.54
RUNX2-201ENST00000359524 A8MTW9 85 aa11.65□□□□□ -0.54
RUNX2-201ENST00000359524 LINC00313P59037 77 aa11.65□□□□□ -0.54
RUNX2-201ENST00000359524 ABCA12Q86UK0 2595 aa11.65□□□□□ -0.54
RUNX2-201ENST00000359524 Q6ZRP5 223 aa11.64□□□□□ -0.55
RUNX2-201ENST00000359524 SMR3AQ99954 134 aa11.64□□□□□ -0.55
RUNX2-201ENST00000359524 TRBV7-4A0A0J9YYF1 115 aa11.64□□□□□ -0.55
RUNX2-201ENST00000359524 POLQO75417 2590 aa11.64□□□□□ -0.55
RUNX2-201ENST00000359524 CYP4F30PQ9H0H9 118 aa11.64□□□□□ -0.55
RUNX2-201ENST00000359524 VPREB1P12018 145 aa11.63□□□□□ -0.55
RUNX2-201ENST00000359524 SERTAD4-AS1Q5TG53 156 aa11.63□□□□□ -0.55
RUNX2-201ENST00000359524 MDFIQ99750 246 aa11.63□□□□□ -0.55
RUNX2-201ENST00000359524 C16orf90A8MZG2 172 aa11.62□□□□□ -0.55
RUNX2-201ENST00000359524 FAM229AH3BQW9 127 aa11.62□□□□□ -0.55
RUNX2-201ENST00000359524 DNAH14Q0VDD8 3507 aa11.62□□□□□ -0.55
RUNX2-201ENST00000359524 SETD2Q9BYW2 2564 aaPredicted RBP11.62□□□□□ -0.55
RUNX2-201ENST00000359524 LAMA1P25391 3075 aa11.62□□□□□ -0.55
RUNX2-201ENST00000359524 DOPEY1Q5JWR5 2465 aa11.62□□□□□ -0.55
RUNX2-201ENST00000359524 LINC00476Q8WZB0 136 aa11.62□□□□□ -0.55
RUNX2-201ENST00000359524 SPACA4Q8TDM5 124 aa11.61□□□□□ -0.55
RUNX2-201ENST00000359524 EPG5Q9HCE0 2579 aa11.61□□□□□ -0.55
RUNX2-201ENST00000359524 ATP11AUNQ6ZP68 121 aa11.6□□□□□ -0.55
RUNX2-201ENST00000359524 PRO0461Q9UI25 63 aa11.6□□□□□ -0.55
RUNX2-201ENST00000359524 C2CD3Q4AC94 2353 aa11.59□□□□□ -0.55
RUNX2-201ENST00000359524 WDFY4Q6ZS81 3184 aa11.59□□□□□ -0.55
RUNX2-201ENST00000359524 C4orf26Q17RF5 130 aa11.58□□□□□ -0.56
RUNX2-201ENST00000359524 ZNF292O60281 2723 aa11.57□□□□□ -0.56
RUNX2-201ENST00000359524 SMCPP49901 116 aaPredicted RBP11.57□□□□□ -0.56
RUNX2-201ENST00000359524 CFAP54Q96N23 3096 aa11.55□□□□□ -0.56
RUNX2-201ENST00000359524 KLK9Q2XQG4 91 aa11.55□□□□□ -0.56
RUNX2-201ENST00000359524 VCANP13611 3396 aa11.55□□□□□ -0.56
RUNX2-201ENST00000359524 A8MWP4 228 aa11.55□□□□□ -0.56
RUNX2-201ENST00000359524 TYMSOSQ8TAI1 123 aa11.54□□□□□ -0.56
RUNX2-201ENST00000359524 MGAQ8IWI9 3026 aa11.53□□□□□ -0.56
RUNX2-201ENST00000359524 COL27A1Q8IZC6 1860 aaPredicted RBP11.53□□□□□ -0.56
RUNX2-201ENST00000359524 EPM2AB3EWF7 344 aa11.53□□□□□ -0.56
RUNX2-201ENST00000359524 FAM218AQ96MZ4 157 aa11.52□□□□□ -0.56
RUNX2-201ENST00000359524 ANKRD17O75179 2603 aaKnown RBP11.52□□□□□ -0.57
RUNX2-201ENST00000359524 VPS13AQ96RL7 3174 aa11.52□□□□□ -0.57
RUNX2-201ENST00000359524 NBDYA0A0U1RRE5 68 aa11.52□□□□□ -0.57
RUNX2-201ENST00000359524 Q9UF83 564 aa11.52□□□□□ -0.57
RUNX2-201ENST00000359524 JMJD1CQ15652 2540 aa11.51□□□□□ -0.57
RUNX2-201ENST00000359524 RTL8CO15255 209 aa11.5□□□□□ -0.57
RUNX2-201ENST00000359524 MRPL34Q9BQ48 92 aaKnown RBP11.49□□□□□ -0.57
RUNX2-201ENST00000359524 IGLV6-57P01721 117 aa11.48□□□□□ -0.57
RUNX2-201ENST00000359524 MTORP42345 2549 aa11.48□□□□□ -0.57
RUNX2-201ENST00000359524 UQCR11O14957 56 aa11.47□□□□□ -0.57
RUNX2-201ENST00000359524 PLA2G1BP04054 148 aaKnown RBP11.46□□□□□ -0.57
RUNX2-201ENST00000359524 RPL37AP61513 92 aaKnown RBP11.46□□□□□ -0.57
RUNX2-201ENST00000359524 REV3LO60673 3130 aa11.46□□□□□ -0.58
RUNX2-201ENST00000359524 DNAH10OSP0CZ25 163 aa11.45□□□□□ -0.58
RUNX2-201ENST00000359524 PHF5AQ7RTV0 110 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms