RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 COX7B2Q8TF08 81 aa12.82□□□□□ -0.36
SNX11-201ENST00000359238 ATP5EP2Q5VTU8 51 aa12.81□□□□□ -0.36
SNX11-201ENST00000359238 HRCT1Q6UXD1 115 aa12.81□□□□□ -0.36
SNX11-201ENST00000359238 GYPEP15421 78 aa12.8□□□□□ -0.36
SNX11-201ENST00000359238 CCL18P55774 89 aa12.79□□□□□ -0.36
SNX11-201ENST00000359238 HUWE1Q7Z6Z7 4374 aaKnown RBP12.79□□□□□ -0.36
SNX11-201ENST00000359238 DAD1P61803 113 aa12.79□□□□□ -0.36
SNX11-201ENST00000359238 LINC00158P58513 81 aa12.78□□□□□ -0.36
SNX11-201ENST00000359238 ORMDL1Q9P0S3 153 aa12.78□□□□□ -0.36
SNX11-201ENST00000359238 GHRHP01286 108 aa12.78□□□□□ -0.36
SNX11-201ENST00000359238 SS18Q15532 418 aa12.78□□□□□ -0.36
SNX11-201ENST00000359238 SLPIP03973 132 aa12.76□□□□□ -0.37
SNX11-201ENST00000359238 IGLV4-60A0A075B6I1 120 aa12.76□□□□□ -0.37
SNX11-201ENST00000359238 K7EIL1 84 aa12.76□□□□□ -0.37
SNX11-201ENST00000359238 SPART-AS1P0CW21 52 aa12.76□□□□□ -0.37
SNX11-201ENST00000359238 LYPD5Q6UWN5 251 aa12.76□□□□□ -0.37
SNX11-201ENST00000359238 IBA57-AS1B1ANH7 110 aa12.75□□□□□ -0.37
SNX11-201ENST00000359238 MRAPQ8TCY5 172 aa12.75□□□□□ -0.37
SNX11-201ENST00000359238 TRBV6-8A0A0A6YYG3 113 aa12.74□□□□□ -0.37
SNX11-201ENST00000359238 HTN3P15516 51 aa12.74□□□□□ -0.37
SNX11-201ENST00000359238 TMEM243Q9BU79 118 aa12.74□□□□□ -0.37
SNX11-201ENST00000359238 PRO0255Q9UI72 69 aa12.74□□□□□ -0.37
SNX11-201ENST00000359238 JMJD7-PLA2G4BH0Y9G9 81 aa12.74□□□□□ -0.37
SNX11-201ENST00000359238 LINC00167Q96N53 147 aa12.74□□□□□ -0.37
SNX11-201ENST00000359238 TRBV10-3A0A0K0K1G6 114 aa12.73□□□□□ -0.37
SNX11-201ENST00000359238 TOMM7Q9P0U1 55 aa12.73□□□□□ -0.37
SNX11-201ENST00000359238 COL7A1Q02388 2944 aa12.73□□□□□ -0.37
SNX11-201ENST00000359238 Q8N3U1 123 aa12.73□□□□□ -0.37
SNX11-201ENST00000359238 UBE2L6O14933 153 aa12.72□□□□□ -0.37
SNX11-201ENST00000359238 TRAV23DV6A0A075B6W5 121 aa12.72□□□□□ -0.37
SNX11-201ENST00000359238 PAX4O43316 350 aa12.72□□□□□ -0.37
SNX11-201ENST00000359238 EPM2AB3EWF7 344 aa12.71□□□□□ -0.37
SNX11-201ENST00000359238 DNHD1Q96M86 4753 aa12.7□□□□□ -0.38
SNX11-201ENST00000359238 IGKV3OR2-268A0A0C4DH90 116 aa12.7□□□□□ -0.38
SNX11-201ENST00000359238 FAM236DA0A1B0GTK5 79 aa12.7□□□□□ -0.38
SNX11-201ENST00000359238 FAM236CP0DP71 79 aa12.7□□□□□ -0.38
SNX11-201ENST00000359238 FAM19A1Q7Z5A9 133 aa12.7□□□□□ -0.38
SNX11-201ENST00000359238 XCL1P47992 114 aa12.69□□□□□ -0.38
SNX11-201ENST00000359238 KPRPQ5T749 579 aaPredicted RBP12.69□□□□□ -0.38
SNX11-201ENST00000359238 ENHOQ6UWT2 76 aa12.69□□□□□ -0.38
SNX11-201ENST00000359238 C20orf197Q8N268 126 aa12.69□□□□□ -0.38
SNX11-201ENST00000359238 A0A0J9YWU9 116 aa12.68□□□□□ -0.38
SNX11-201ENST00000359238 BCE1O60756 84 aa12.68□□□□□ -0.38
SNX11-201ENST00000359238 SERP1Q9Y6X1 66 aa12.68□□□□□ -0.38
SNX11-201ENST00000359238 PFN2P35080 140 aa12.67□□□□□ -0.38
SNX11-201ENST00000359238 TMEM256-PLSCR3K7ERE1 68 aa12.66□□□□□ -0.38
SNX11-201ENST00000359238 IGHV3OR16-9A0A0B4J2B5 98 aa12.66□□□□□ -0.38
SNX11-201ENST00000359238 UBL5Q9BZL1 73 aa12.66□□□□□ -0.38
SNX11-201ENST00000359238 Q6ZTC4 211 aa12.65□□□□□ -0.39
SNX11-201ENST00000359238 Q8N814 137 aa12.65□□□□□ -0.39
SNX11-201ENST00000359238 C11orf68Q9H3H3 251 aaKnown RBP12.65□□□□□ -0.39
SNX11-201ENST00000359238 CLPSL2Q6UWE3 100 aa12.64□□□□□ -0.39
SNX11-201ENST00000359238 DNAH9Q9NYC9 4486 aa12.64□□□□□ -0.39
SNX11-201ENST00000359238 A0A087WZ39 114 aa12.63□□□□□ -0.39
SNX11-201ENST00000359238 TRAV7A0A075B6U4 112 aa12.63□□□□□ -0.39
SNX11-201ENST00000359238 H7BZZ5 65 aa12.63□□□□□ -0.39
SNX11-201ENST00000359238 NANOS2P60321 138 aaKnown RBP12.62□□□□□ -0.39
SNX11-201ENST00000359238 TM2D3Q9BRN9 247 aa12.62□□□□□ -0.39
SNX11-201ENST00000359238 PRO0628Q9UI54 55 aa12.61□□□□□ -0.39
SNX11-201ENST00000359238 LYSTQ99698 3801 aa12.59□□□□□ -0.39
SNX11-201ENST00000359238 C11orf45Q8TAV5 145 aa12.59□□□□□ -0.39
SNX11-201ENST00000359238 KLKP1Q107X0 134 aa12.58□□□□□ -0.4
SNX11-201ENST00000359238 C6orf226Q5I0X4 101 aa12.56□□□□□ -0.4
SNX11-201ENST00000359238 LINC00959A0A1B0GUT2 108 aa12.55□□□□□ -0.4
SNX11-201ENST00000359238 LINC00336Q6ZUF6 198 aa12.55□□□□□ -0.4
SNX11-201ENST00000359238 LINC00269Q8N2A0 174 aa12.54□□□□□ -0.4
SNX11-201ENST00000359238 Q6ZQT0 140 aa12.54□□□□□ -0.4
SNX11-201ENST00000359238 SMIM26A0A096LP01 95 aa12.53□□□□□ -0.4
SNX11-201ENST00000359238 A0A1B0GUV1 79 aa12.53□□□□□ -0.4
SNX11-201ENST00000359238 LOC110117498A0A087WWA1 95 aa12.53□□□□□ -0.4
SNX11-201ENST00000359238 STAB2Q8WWQ8 2551 aa12.52□□□□□ -0.41
SNX11-201ENST00000359238 IGLV10-54A0A075B6I4 117 aa12.52□□□□□ -0.41
SNX11-201ENST00000359238 DEFB131BA0A096LNP1 70 aa12.52□□□□□ -0.41
SNX11-201ENST00000359238 LINC01547P58512 204 aaPredicted RBP12.51□□□□□ -0.41
SNX11-201ENST00000359238 RBM3P98179 157 aaKnown RBP12.51□□□□□ -0.41
SNX11-201ENST00000359238 Q8IZM0 81 aa12.51□□□□□ -0.41
SNX11-201ENST00000359238 PRR3P79522 188 aaKnown RBP12.5□□□□□ -0.41
SNX11-201ENST00000359238 ANGP03950 147 aaKnown RBP12.49□□□□□ -0.41
SNX11-201ENST00000359238 PRKDCP78527 4128 aaKnown RBP12.49□□□□□ -0.41
SNX11-201ENST00000359238 TRAV10A0A0B4J240 114 aa12.49□□□□□ -0.41
SNX11-201ENST00000359238 ZNF561-AS1K7EIQ3 104 aa12.48□□□□□ -0.41
SNX11-201ENST00000359238 CSMD3Q7Z407 3707 aa12.48□□□□□ -0.41
SNX11-201ENST00000359238 LELP1Q5T871 98 aa12.48□□□□□ -0.41
SNX11-201ENST00000359238 FP248Q71RG6 208 aaPredicted RBP12.48□□□□□ -0.41
SNX11-201ENST00000359238 WFDC10BQ8IUB3 73 aa12.48□□□□□ -0.41
SNX11-201ENST00000359238 C6orf223Q8N319 242 aa12.48□□□□□ -0.41
SNX11-201ENST00000359238 LINC00575Q6W349 94 aa12.47□□□□□ -0.41
SNX11-201ENST00000359238 RMI2Q96E14 147 aa12.47□□□□□ -0.41
SNX11-201ENST00000359238 CXCL6P80162 114 aa12.46□□□□□ -0.41
SNX11-201ENST00000359238 Q6ZVQ6 151 aa12.46□□□□□ -0.41
SNX11-201ENST00000359238 SNURFQ9Y675 71 aa12.46□□□□□ -0.41
SNX11-201ENST00000359238 F8WEM9 126 aa12.46□□□□□ -0.41
SNX11-201ENST00000359238 NDUFC1O43677 76 aa12.46□□□□□ -0.41
SNX11-201ENST00000359238 REG3AQ06141 175 aa12.46□□□□□ -0.41
SNX11-201ENST00000359238 H3BNG1 76 aa12.45□□□□□ -0.42
SNX11-201ENST00000359238 C6orf99Q4VX62 202 aa12.45□□□□□ -0.42
SNX11-201ENST00000359238 HAMPP81172 84 aa12.45□□□□□ -0.42
SNX11-201ENST00000359238 COX17Q14061 63 aa12.44□□□□□ -0.42
SNX11-201ENST00000359238 ESRGQ1W209 222 aa12.44□□□□□ -0.42
SNX11-201ENST00000359238 B9D2Q9BPU9 175 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms