RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 C2orf66Q6UXQ4 117 aa2.52□□□□□ -2.01
SMC1B-201ENST00000357450 CIRBP-AS1Q8TBR5 109 aa2.52□□□□□ -2.01
SMC1B-201ENST00000357450 GNB1LQ9BYB4 327 aa2.52□□□□□ -2.01
SMC1B-201ENST00000357450 SLC25A20O43772 301 aa2.52□□□□□ -2.01
SMC1B-201ENST00000357450 CDK2AP2O75956 126 aa2.52□□□□□ -2.01
SMC1B-201ENST00000357450 RPL28P46779 137 aaKnown RBP2.52□□□□□ -2.01
SMC1B-201ENST00000357450 RPL32P62910 135 aaKnown RBP2.52□□□□□ -2.01
SMC1B-201ENST00000357450 C2orf82Q6UX34 121 aa2.52□□□□□ -2.01
SMC1B-201ENST00000357450 GTF2H5Q6ZYL4 71 aa2.52□□□□□ -2.01
SMC1B-201ENST00000357450 IGLV9-49A0A0B4J1Y8 123 aa2.51□□□□□ -2.01
SMC1B-201ENST00000357450 Q6ZUT4 128 aa2.51□□□□□ -2.01
SMC1B-201ENST00000357450 NUP35Q8NFH5 326 aa2.51□□□□□ -2.01
SMC1B-201ENST00000357450 TMEM141Q96I45 108 aa2.51□□□□□ -2.01
SMC1B-201ENST00000357450 KRTAP1-5Q9BYS1 174 aa2.51□□□□□ -2.01
SMC1B-201ENST00000357450 SEC61GP60059 68 aa2.51□□□□□ -2.01
SMC1B-201ENST00000357450 GAGE2AQ6NT46 116 aa2.51□□□□□ -2.01
SMC1B-201ENST00000357450 FAM19A2Q8N3H0 131 aa2.51□□□□□ -2.01
SMC1B-201ENST00000357450 NMUP48645 174 aa2.51□□□□□ -2.01
SMC1B-201ENST00000357450 SERTAD4-AS1Q5TG53 156 aa2.51□□□□□ -2.01
SMC1B-201ENST00000357450 VAMP8Q9BV40 100 aa2.51□□□□□ -2.01
SMC1B-201ENST00000357450 SPINK6Q6UWN8 80 aa2.5□□□□□ -2.01
SMC1B-201ENST00000357450 TYMSOSQ8TAI1 123 aa2.5□□□□□ -2.01
SMC1B-201ENST00000357450 A0A0U1RQV1 116 aa2.5□□□□□ -2.01
SMC1B-201ENST00000357450 LINC00959A0A1B0GUT2 108 aa2.5□□□□□ -2.01
SMC1B-201ENST00000357450 A0A1B0GV72 72 aa2.5□□□□□ -2.01
SMC1B-201ENST00000357450 CD164L2Q6UWJ8 174 aa2.5□□□□□ -2.01
SMC1B-201ENST00000357450 UNQ6190/PRO20217Q6UXQ8 127 aa2.5□□□□□ -2.01
SMC1B-201ENST00000357450 IQCJQ1A5X6 159 aa2.5□□□□□ -2.01
SMC1B-201ENST00000357450 PHF5AQ7RTV0 110 aaKnown RBP2.5□□□□□ -2.01
SMC1B-201ENST00000357450 SMIM2Q9BVW6 85 aa2.5□□□□□ -2.01
SMC1B-201ENST00000357450 HERVK_113P63121 156 aa2.5□□□□□ -2.01
SMC1B-201ENST00000357450 Q6ZR54 194 aa2.5□□□□□ -2.01
SMC1B-201ENST00000357450 OSTCQ9NRP0 149 aa2.5□□□□□ -2.01
SMC1B-201ENST00000357450 M0QY20 66 aa2.49□□□□□ -2.01
SMC1B-201ENST00000357450 WFDC2Q14508 124 aa2.49□□□□□ -2.01
SMC1B-201ENST00000357450 MRPL51Q4U2R6 128 aaKnown RBP2.49□□□□□ -2.01
SMC1B-201ENST00000357450 BVES-AS1Q5T3Y7 98 aa2.49□□□□□ -2.01
SMC1B-201ENST00000357450 LINC00242Q5T6M2 205 aa2.49□□□□□ -2.01
SMC1B-201ENST00000357450 UPK3BQ9BT76 320 aa2.49□□□□□ -2.01
SMC1B-201ENST00000357450 TIMM21Q9BVV7 248 aa2.49□□□□□ -2.01
SMC1B-201ENST00000357450 M0R2T5 61 aa2.49□□□□□ -2.01
SMC1B-201ENST00000357450 CRYGAP11844 174 aa2.49□□□□□ -2.01
SMC1B-201ENST00000357450 Q6ZRU5 148 aa2.49□□□□□ -2.01
SMC1B-201ENST00000357450 PMCHL2Q9BQD1 86 aa2.49□□□□□ -2.01
SMC1B-201ENST00000357450 TRAV9-1A0A075B6T8 112 aa2.49□□□□□ -2.01
SMC1B-201ENST00000357450 ZNF815PA8K554 130 aa2.49□□□□□ -2.01
SMC1B-201ENST00000357450 NCR3O14931 201 aa2.49□□□□□ -2.01
SMC1B-201ENST00000357450 NPYP01303 97 aa2.49□□□□□ -2.01
SMC1B-201ENST00000357450 HBDP02042 147 aa2.49□□□□□ -2.01
SMC1B-201ENST00000357450 LINC00614P0C842 121 aa2.49□□□□□ -2.01
SMC1B-201ENST00000357450 LINC00694P0DN24 101 aa2.49□□□□□ -2.01
SMC1B-201ENST00000357450 TSPEAR-AS2P59090 65 aa2.49□□□□□ -2.01
SMC1B-201ENST00000357450 LCE1AQ5T7P2 110 aa2.49□□□□□ -2.01
SMC1B-201ENST00000357450 ZC2HC1BQ5TFG8 222 aa2.49□□□□□ -2.01
SMC1B-201ENST00000357450 FAM104BQ5XKR9 115 aa2.49□□□□□ -2.01
SMC1B-201ENST00000357450 ATOH7Q8N100 152 aa2.49□□□□□ -2.01
SMC1B-201ENST00000357450 GFRA4Q9GZZ7 299 aa2.49□□□□□ -2.01
SMC1B-201ENST00000357450 SPANXA1Q9NS26 97 aa2.49□□□□□ -2.01
SMC1B-201ENST00000357450 FAM30AQ9NZY2 134 aa2.49□□□□□ -2.01
SMC1B-201ENST00000357450 CSDC2Q9Y534 153 aaKnown RBP2.49□□□□□ -2.01
SMC1B-201ENST00000357450 SPACA4Q8TDM5 124 aa2.48□□□□□ -2.01
SMC1B-201ENST00000357450 PMCHL1Q16048 86 aa2.48□□□□□ -2.01
SMC1B-201ENST00000357450 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.48□□□□□ -2.01
SMC1B-201ENST00000357450 COL5A1-AS1Q5SY13 56 aa2.47□□□□□ -2.01
SMC1B-201ENST00000357450 ENHOQ6UWT2 76 aa2.47□□□□□ -2.01
SMC1B-201ENST00000357450 C9orf163Q8N9P6 203 aa2.47□□□□□ -2.01
SMC1B-201ENST00000357450 Q8NDZ9 215 aa2.47□□□□□ -2.01
SMC1B-201ENST00000357450 COX7B2Q8TF08 81 aa2.47□□□□□ -2.01
SMC1B-201ENST00000357450 FAM236DA0A1B0GTK5 79 aa2.47□□□□□ -2.01
SMC1B-201ENST00000357450 LEPROTL1O95214 131 aa2.47□□□□□ -2.01
SMC1B-201ENST00000357450 FAM236CP0DP71 79 aa2.47□□□□□ -2.01
SMC1B-201ENST00000357450 C2orf48Q96LS8 159 aa2.47□□□□□ -2.01
SMC1B-201ENST00000357450 RETNLBQ9BQ08 111 aa2.47□□□□□ -2.01
SMC1B-201ENST00000357450 CYSTM1Q9H1C7 97 aa2.47□□□□□ -2.01
SMC1B-201ENST00000357450 K7ERU9 68 aa2.47□□□□□ -2.01
SMC1B-201ENST00000357450 SCGB1C2P0DMR2 95 aa2.47□□□□□ -2.01
SMC1B-201ENST00000357450 PRR26Q8N8Z3 221 aa2.47□□□□□ -2.01
SMC1B-201ENST00000357450 C20orf203Q8NBC4 194 aa2.47□□□□□ -2.01
SMC1B-201ENST00000357450 EPPK1P58107 5090 aaKnown RBP2.47□□□□□ -2.01
SMC1B-201ENST00000357450 PSMB2P49721 201 aa2.47□□□□□ -2.01
SMC1B-201ENST00000357450 PRLHP81277 87 aa2.47□□□□□ -2.01
SMC1B-201ENST00000357450 COX19Q49B96 90 aa2.47□□□□□ -2.01
SMC1B-201ENST00000357450 ATP5L2Q7Z4Y8 100 aa2.47□□□□□ -2.01
SMC1B-201ENST00000357450 RAB37Q96AX2 223 aa2.47□□□□□ -2.01
SMC1B-201ENST00000357450 SMIM12Q96EX1 92 aa2.47□□□□□ -2.01
SMC1B-201ENST00000357450 MYMXA0A1B0GTQ4 84 aa2.46□□□□□ -2.02
SMC1B-201ENST00000357450 PCP2Q8IVA1 136 aa2.46□□□□□ -2.02
SMC1B-201ENST00000357450 RPL13AP40429 203 aaKnown RBP2.46□□□□□ -2.02
SMC1B-201ENST00000357450 C20orf78Q9BR46 151 aa2.46□□□□□ -2.02
SMC1B-201ENST00000357450 HSPB8Q9UJY1 196 aa2.46□□□□□ -2.02
SMC1B-201ENST00000357450 J3QR89 54 aa2.46□□□□□ -2.02
SMC1B-201ENST00000357450 FABP2P12104 132 aa2.46□□□□□ -2.02
SMC1B-201ENST00000357450 FAM19A3Q7Z5A8 133 aa2.46□□□□□ -2.02
SMC1B-201ENST00000357450 F8VRH5 84 aa2.45□□□□□ -2.02
SMC1B-201ENST00000357450 PCLOQ9Y6V0 5065 aa2.45□□□□□ -2.02
SMC1B-201ENST00000357450 CXCL5P42830 114 aa2.45□□□□□ -2.02
SMC1B-201ENST00000357450 CDKN2A-AS1Q9UH64 79 aa2.45□□□□□ -2.02
SMC1B-201ENST00000357450 DAND5Q8N907 189 aa2.45□□□□□ -2.02
SMC1B-201ENST00000357450 NAA38Q9BRA0 125 aaKnown RBP2.45□□□□□ -2.02
SMC1B-201ENST00000357450 ZNF706Q9Y5V0 76 aaPredicted RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms