RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 LINC00575Q6W349 94 aa6.9□□□□□ -1.3
PTPRA-203ENST00000356147 PRO0255Q9UI72 69 aa6.9□□□□□ -1.3
PTPRA-203ENST00000356147 RPS28P62857 69 aaKnown RBP6.9□□□□□ -1.31
PTPRA-203ENST00000356147 TENM1Q9UKZ4 2725 aa6.89□□□□□ -1.31
PTPRA-203ENST00000356147 DEFB135Q30KP9 77 aa6.89□□□□□ -1.31
PTPRA-203ENST00000356147 CD164L2Q6UWJ8 174 aa6.89□□□□□ -1.31
PTPRA-203ENST00000356147 A0A1B0GUV1 79 aa6.89□□□□□ -1.31
PTPRA-203ENST00000356147 PKD1L1Q8TDX9 2849 aa6.89□□□□□ -1.31
PTPRA-203ENST00000356147 FASNP49327 2511 aaKnown RBP6.88□□□□□ -1.31
PTPRA-203ENST00000356147 Q6ZQT0 140 aa6.88□□□□□ -1.31
PTPRA-203ENST00000356147 X6R8D5 127 aa6.88□□□□□ -1.31
PTPRA-203ENST00000356147 TENM4Q6N022 2769 aa6.88□□□□□ -1.31
PTPRA-203ENST00000356147 SPAG11BQ08648 103 aa6.88□□□□□ -1.31
PTPRA-203ENST00000356147 LINC01547P58512 204 aaPredicted RBP6.87□□□□□ -1.31
PTPRA-203ENST00000356147 CYSRT1A8MQ03 144 aa6.87□□□□□ -1.31
PTPRA-203ENST00000356147 Q5XG85 94 aa6.87□□□□□ -1.31
PTPRA-203ENST00000356147 Q6ZVQ6 151 aa6.87□□□□□ -1.31
PTPRA-203ENST00000356147 RMI2Q96E14 147 aa6.87□□□□□ -1.31
PTPRA-203ENST00000356147 KLK12Q9UKR0 248 aa6.87□□□□□ -1.31
PTPRA-203ENST00000356147 TEP1Q99973 2627 aaKnown RBP6.86□□□□□ -1.31
PTPRA-203ENST00000356147 TRBV10-3A0A0K0K1G6 114 aa6.86□□□□□ -1.31
PTPRA-203ENST00000356147 NDUFC2O95298 119 aa6.86□□□□□ -1.31
PTPRA-203ENST00000356147 ATRQ13535 2644 aa6.86□□□□□ -1.31
PTPRA-203ENST00000356147 ANK3Q12955 4377 aaKnown RBP6.86□□□□□ -1.31
PTPRA-203ENST00000356147 HIVEP1P15822 2718 aa6.86□□□□□ -1.31
PTPRA-203ENST00000356147 TRRAPQ9Y4A5 3859 aa6.85□□□□□ -1.31
PTPRA-203ENST00000356147 CMC4P56277 68 aaPredicted RBP6.85□□□□□ -1.31
PTPRA-203ENST00000356147 Q8N9L7 120 aa6.85□□□□□ -1.31
PTPRA-203ENST00000356147 CELA1Q9UNI1 258 aa6.85□□□□□ -1.31
PTPRA-203ENST00000356147 ZNF561-AS1K7EIQ3 104 aa6.85□□□□□ -1.31
PTPRA-203ENST00000356147 LYPD5Q6UWN5 251 aa6.85□□□□□ -1.31
PTPRA-203ENST00000356147 PDZD2O15018 2839 aa6.84□□□□□ -1.31
PTPRA-203ENST00000356147 FAM236DA0A1B0GTK5 79 aa6.84□□□□□ -1.31
PTPRA-203ENST00000356147 FAM236CP0DP71 79 aa6.84□□□□□ -1.31
PTPRA-203ENST00000356147 ATP5EP2Q5VTU8 51 aa6.84□□□□□ -1.31
PTPRA-203ENST00000356147 COX17Q14061 63 aa6.84□□□□□ -1.31
PTPRA-203ENST00000356147 SMR3AQ99954 134 aa6.84□□□□□ -1.31
PTPRA-203ENST00000356147 H7BZZ5 65 aa6.83□□□□□ -1.32
PTPRA-203ENST00000356147 KRTAP10-3P60369 221 aa6.83□□□□□ -1.32
PTPRA-203ENST00000356147 HIGD2BQ4VC39 106 aa6.83□□□□□ -1.32
PTPRA-203ENST00000356147 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.83□□□□□ -1.32
PTPRA-203ENST00000356147 TM2D3Q9BRN9 247 aa6.83□□□□□ -1.32
PTPRA-203ENST00000356147 DAD1P61803 113 aa6.83□□□□□ -1.32
PTPRA-203ENST00000356147 HELZ2Q9BYK8 2649 aaKnown RBP6.83□□□□□ -1.32
PTPRA-203ENST00000356147 IGHV4-28A0A0C4DH34 117 aa6.82□□□□□ -1.32
PTPRA-203ENST00000356147 LINC00612Q8N6U2 182 aa6.82□□□□□ -1.32
PTPRA-203ENST00000356147 F8P00451 2351 aa6.82□□□□□ -1.32
PTPRA-203ENST00000356147 F8WEM9 126 aa6.81□□□□□ -1.32
PTPRA-203ENST00000356147 MUC7Q8TAX7 377 aa6.81□□□□□ -1.32
PTPRA-203ENST00000356147 IGLV6-57P01721 117 aa6.81□□□□□ -1.32
PTPRA-203ENST00000356147 C6orf48Q9UBA6 75 aa6.81□□□□□ -1.32
PTPRA-203ENST00000356147 TRAV7A0A075B6U4 112 aa6.8□□□□□ -1.32
PTPRA-203ENST00000356147 HECTD1Q9ULT8 2610 aa6.8□□□□□ -1.32
PTPRA-203ENST00000356147 LOC110117498A0A087WWA1 95 aa6.79□□□□□ -1.32
PTPRA-203ENST00000356147 DIRC1Q969H9 104 aa6.79□□□□□ -1.32
PTPRA-203ENST00000356147 KRTAP1-1Q07627 177 aa6.79□□□□□ -1.32
PTPRA-203ENST00000356147 ZNF73O43830 326 aaPredicted RBP6.79□□□□□ -1.32
PTPRA-203ENST00000356147 KMT2BQ9UMN6 2715 aaPredicted RBP6.78□□□□□ -1.32
PTPRA-203ENST00000356147 COX7BP24311 80 aa6.77□□□□□ -1.33
PTPRA-203ENST00000356147 DEFB105AQ8NG35 78 aa6.77□□□□□ -1.33
PTPRA-203ENST00000356147 LINC00474Q9P2X8 69 aa6.77□□□□□ -1.33
PTPRA-203ENST00000356147 OTOGQ6ZRI0 2925 aa6.77□□□□□ -1.33
PTPRA-203ENST00000356147 C3orf84H3BNL1 204 aa6.77□□□□□ -1.33
PTPRA-203ENST00000356147 A0A0J9YWU9 116 aa6.76□□□□□ -1.33
PTPRA-203ENST00000356147 BPY2O14599 106 aa6.76□□□□□ -1.33
PTPRA-203ENST00000356147 IGHV4-30-4P0DP06 118 aa6.76□□□□□ -1.33
PTPRA-203ENST00000356147 C16orf95Q9H693 158 aa6.76□□□□□ -1.33
PTPRA-203ENST00000356147 LYRM9A8MSI8 78 aa6.75□□□□□ -1.33
PTPRA-203ENST00000356147 CAMK2N2Q96S95 79 aa6.75□□□□□ -1.33
PTPRA-203ENST00000356147 BAHCC1Q9P281 2608 aa6.75□□□□□ -1.33
PTPRA-203ENST00000356147 NDUFC2-KCTD14E9PQ53 114 aa6.75□□□□□ -1.33
PTPRA-203ENST00000356147 LINC00336Q6ZUF6 198 aa6.75□□□□□ -1.33
PTPRA-203ENST00000356147 FLNBO75369 2602 aaKnown RBP6.75□□□□□ -1.33
PTPRA-203ENST00000356147 WFDC10BQ8IUB3 73 aa6.74□□□□□ -1.33
PTPRA-203ENST00000356147 TRBV7-4A0A0J9YYF1 115 aa6.74□□□□□ -1.33
PTPRA-203ENST00000356147 KLKP1Q107X0 134 aa6.74□□□□□ -1.33
PTPRA-203ENST00000356147 SERP1Q9Y6X1 66 aa6.74□□□□□ -1.33
PTPRA-203ENST00000356147 NREPQ16612 68 aa6.73□□□□□ -1.33
PTPRA-203ENST00000356147 LELP1Q5T871 98 aa6.73□□□□□ -1.33
PTPRA-203ENST00000356147 Q6ZRU5 148 aa6.73□□□□□ -1.33
PTPRA-203ENST00000356147 FP248Q71RG6 208 aaPredicted RBP6.73□□□□□ -1.33
PTPRA-203ENST00000356147 C9orf66Q5T8R8 295 aa6.73□□□□□ -1.33
PTPRA-203ENST00000356147 CXCL6P80162 114 aa6.72□□□□□ -1.33
PTPRA-203ENST00000356147 TENM3Q9P273 2699 aa6.72□□□□□ -1.33
PTPRA-203ENST00000356147 ELOF1P60002 83 aaKnown RBP6.72□□□□□ -1.33
PTPRA-203ENST00000356147 Q8NAQ8 132 aa6.72□□□□□ -1.33
PTPRA-203ENST00000356147 VPREB1P12018 145 aa6.72□□□□□ -1.33
PTPRA-203ENST00000356147 MIFP14174 115 aa6.71□□□□□ -1.34
PTPRA-203ENST00000356147 PRR34Q9NV39 138 aa6.71□□□□□ -1.34
PTPRA-203ENST00000356147 MPLKIPQ8TAP9 179 aa6.71□□□□□ -1.34
PTPRA-203ENST00000356147 TRBV7-6A0A0J9YX20 115 aa6.7□□□□□ -1.34
PTPRA-203ENST00000356147 SPART-AS1P0CW21 52 aa6.7□□□□□ -1.34
PTPRA-203ENST00000356147 RETNQ9HD89 108 aa6.7□□□□□ -1.34
PTPRA-203ENST00000356147 PDE6GP18545 87 aa6.7□□□□□ -1.34
PTPRA-203ENST00000356147 FAM229BQ4G0N7 80 aa6.7□□□□□ -1.34
PTPRA-203ENST00000356147 TMEM254Q8TBM7 123 aa6.7□□□□□ -1.34
PTPRA-203ENST00000356147 Q6ZRP5 223 aa6.68□□□□□ -1.34
PTPRA-203ENST00000356147 APOC4P55056 127 aa6.68□□□□□ -1.34
PTPRA-203ENST00000356147 LINC00528Q8N1L1 170 aa6.68□□□□□ -1.34
PTPRA-203ENST00000356147 HIGD2AQ9BW72 106 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms