RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 CRPP02741 224 aa11.94□□□□□ -0.5
NPAS3-202ENST00000356141 C10orf25Q5T742 122 aa11.94□□□□□ -0.5
NPAS3-202ENST00000356141 C2orf48Q96LS8 159 aa11.94□□□□□ -0.5
NPAS3-202ENST00000356141 LINC00336Q6ZUF6 198 aa11.94□□□□□ -0.5
NPAS3-202ENST00000356141 C3orf22Q8N5N4 141 aa11.93□□□□□ -0.5
NPAS3-202ENST00000356141 CD164L2Q6UWJ8 174 aa11.93□□□□□ -0.5
NPAS3-202ENST00000356141 A0A0B4J2C4 111 aa11.92□□□□□ -0.5
NPAS3-202ENST00000356141 UNQ6190/PRO20217Q6UXQ8 127 aa11.92□□□□□ -0.5
NPAS3-202ENST00000356141 DNAH9Q9NYC9 4486 aa11.91□□□□□ -0.5
NPAS3-202ENST00000356141 RPS28P62857 69 aaKnown RBP11.9□□□□□ -0.5
NPAS3-202ENST00000356141 SND1-IT1Q9HBX3 110 aa11.9□□□□□ -0.5
NPAS3-202ENST00000356141 CCL18P55774 89 aa11.9□□□□□ -0.5
NPAS3-202ENST00000356141 DNAH10Q8IVF4 4471 aa11.9□□□□□ -0.51
NPAS3-202ENST00000356141 GAGE2AQ6NT46 116 aa11.89□□□□□ -0.51
NPAS3-202ENST00000356141 TIMM17BO60830 172 aa11.88□□□□□ -0.51
NPAS3-202ENST00000356141 SPAG11BQ08648 103 aa11.88□□□□□ -0.51
NPAS3-202ENST00000356141 DNAH7Q8WXX0 4024 aa11.88□□□□□ -0.51
NPAS3-202ENST00000356141 IGKV2D-24A0A075B6R9 120 aa11.88□□□□□ -0.51
NPAS3-202ENST00000356141 LINC01620Q4KN68 170 aa11.88□□□□□ -0.51
NPAS3-202ENST00000356141 FAM19A1Q7Z5A9 133 aa11.88□□□□□ -0.51
NPAS3-202ENST00000356141 PRKDCP78527 4128 aaKnown RBP11.88□□□□□ -0.51
NPAS3-202ENST00000356141 UQCRQO14949 82 aa11.87□□□□□ -0.51
NPAS3-202ENST00000356141 C1orf195Q5TG92 126 aa11.87□□□□□ -0.51
NPAS3-202ENST00000356141 LINC00337Q8N6G1 96 aa11.87□□□□□ -0.51
NPAS3-202ENST00000356141 KIAA0087Q14695 138 aa11.87□□□□□ -0.51
NPAS3-202ENST00000356141 TM2D3Q9BRN9 247 aa11.86□□□□□ -0.51
NPAS3-202ENST00000356141 IGKV2-28A0A075B6P5 120 aa11.86□□□□□ -0.51
NPAS3-202ENST00000356141 LECT2O14960 151 aa11.86□□□□□ -0.51
NPAS3-202ENST00000356141 IGKV2D-28P01615 120 aa11.86□□□□□ -0.51
NPAS3-202ENST00000356141 Q5XG85 94 aa11.85□□□□□ -0.51
NPAS3-202ENST00000356141 Q8IZM0 81 aa11.84□□□□□ -0.51
NPAS3-202ENST00000356141 XAGE1AQ9HD64 81 aa11.84□□□□□ -0.51
NPAS3-202ENST00000356141 DSCR8Q96T75 97 aa11.83□□□□□ -0.52
NPAS3-202ENST00000356141 hADV29S1A0JD25 119 aa11.83□□□□□ -0.52
NPAS3-202ENST00000356141 NCR3O14931 201 aa11.82□□□□□ -0.52
NPAS3-202ENST00000356141 Q8NDZ9 215 aa11.82□□□□□ -0.52
NPAS3-202ENST00000356141 DPH3Q96FX2 82 aa11.82□□□□□ -0.52
NPAS3-202ENST00000356141 PRR34Q9NV39 138 aa11.82□□□□□ -0.52
NPAS3-202ENST00000356141 TRBV7-7A0A0K0K1E9 115 aa11.82□□□□□ -0.52
NPAS3-202ENST00000356141 LINC00588Q9Y4M8 146 aa11.82□□□□□ -0.52
NPAS3-202ENST00000356141 ATXN8Q156A1 80 aa11.82□□□□□ -0.52
NPAS3-202ENST00000356141 A0A0U1RQV1 116 aa11.81□□□□□ -0.52
NPAS3-202ENST00000356141 IBA57-AS1B1ANH7 110 aa11.81□□□□□ -0.52
NPAS3-202ENST00000356141 CASC10Q5T4H9 136 aa11.81□□□□□ -0.52
NPAS3-202ENST00000356141 TRAV10A0A0B4J240 114 aa11.8□□□□□ -0.52
NPAS3-202ENST00000356141 CYSTM1Q9H1C7 97 aa11.79□□□□□ -0.52
NPAS3-202ENST00000356141 TRBV10-2A0A0K0K1G8 114 aa11.78□□□□□ -0.52
NPAS3-202ENST00000356141 TRBV30A0A0K0K1B3 111 aa11.78□□□□□ -0.52
NPAS3-202ENST00000356141 FAM218AQ96MZ4 157 aa11.78□□□□□ -0.52
NPAS3-202ENST00000356141 H3BS24 57 aa11.78□□□□□ -0.52
NPAS3-202ENST00000356141 COX6CP09669 75 aa11.78□□□□□ -0.52
NPAS3-202ENST00000356141 PLECQ15149 4684 aaKnown RBP11.77□□□□□ -0.53
NPAS3-202ENST00000356141 TRACP01848 142 aa11.77□□□□□ -0.53
NPAS3-202ENST00000356141 SMIM11BQ8TCY0 68 aa11.76□□□□□ -0.53
NPAS3-202ENST00000356141 COX7CP15954 63 aa11.76□□□□□ -0.53
NPAS3-202ENST00000356141 CAMK2N2Q96S95 79 aa11.75□□□□□ -0.53
NPAS3-202ENST00000356141 H3BNG1 76 aa11.75□□□□□ -0.53
NPAS3-202ENST00000356141 C6orf48Q9UBA6 75 aa11.75□□□□□ -0.53
NPAS3-202ENST00000356141 FBN3Q75N90 2809 aa11.74□□□□□ -0.53
NPAS3-202ENST00000356141 Q6ZRU5 148 aa11.73□□□□□ -0.53
NPAS3-202ENST00000356141 SLPIP03973 132 aa11.72□□□□□ -0.53
NPAS3-202ENST00000356141 C15orf56Q8N910 161 aa11.72□□□□□ -0.53
NPAS3-202ENST00000356141 COPS9Q8WXC6 57 aa11.72□□□□□ -0.53
NPAS3-202ENST00000356141 RPL18AQ02543 176 aaKnown RBP11.71□□□□□ -0.53
NPAS3-202ENST00000356141 A0A087WYN8 130 aa11.71□□□□□ -0.54
NPAS3-202ENST00000356141 CRYGAP11844 174 aa11.71□□□□□ -0.54
NPAS3-202ENST00000356141 KRTAP26-1Q6PEX3 210 aa11.71□□□□□ -0.54
NPAS3-202ENST00000356141 STARD9Q9P2P6 4700 aa11.71□□□□□ -0.54
NPAS3-202ENST00000356141 LINC01556Q5JQF7 62 aa11.7□□□□□ -0.54
NPAS3-202ENST00000356141 TRAV13-2A0A0B4J235 113 aa11.7□□□□□ -0.54
NPAS3-202ENST00000356141 FAM240AA0A1B0GVK7 77 aa11.69□□□□□ -0.54
NPAS3-202ENST00000356141 SMCR5Q8TEV8 140 aa11.69□□□□□ -0.54
NPAS3-202ENST00000356141 IMUPQ9GZP8 106 aa11.69□□□□□ -0.54
NPAS3-202ENST00000356141 LST1O00453 97 aa11.69□□□□□ -0.54
NPAS3-202ENST00000356141 LINC01561Q8N1V8 128 aa11.69□□□□□ -0.54
NPAS3-202ENST00000356141 DNAH1Q9P2D7 4330 aa11.67□□□□□ -0.54
NPAS3-202ENST00000356141 CXCL5P42830 114 aa11.66□□□□□ -0.54
NPAS3-202ENST00000356141 TMEM258P61165 79 aa11.66□□□□□ -0.54
NPAS3-202ENST00000356141 UBE2DNLQ8IWF7 75 aa11.66□□□□□ -0.54
NPAS3-202ENST00000356141 S100A7L2Q5SY68 101 aa11.66□□□□□ -0.54
NPAS3-202ENST00000356141 KRTAP1-5Q9BYS1 174 aa11.66□□□□□ -0.54
NPAS3-202ENST00000356141 DNAH10OSP0CZ25 163 aa11.64□□□□□ -0.55
NPAS3-202ENST00000356141 H3BT86 120 aa11.63□□□□□ -0.55
NPAS3-202ENST00000356141 LINC00643Q86TS7 51 aa11.63□□□□□ -0.55
NPAS3-202ENST00000356141 USP17L23D6RBM5 183 aa11.62□□□□□ -0.55
NPAS3-202ENST00000356141 RPL28P46779 137 aaKnown RBP11.61□□□□□ -0.55
NPAS3-202ENST00000356141 C6orf99Q4VX62 202 aa11.61□□□□□ -0.55
NPAS3-202ENST00000356141 B9D2Q9BPU9 175 aa11.61□□□□□ -0.55
NPAS3-202ENST00000356141 M0R2N4 97 aa11.61□□□□□ -0.55
NPAS3-202ENST00000356141 Q6ZRP5 223 aa11.61□□□□□ -0.55
NPAS3-202ENST00000356141 ATOX1O00244 68 aa11.6□□□□□ -0.55
NPAS3-202ENST00000356141 C9orf129Q5T035 196 aaKnown RBP11.6□□□□□ -0.55
NPAS3-202ENST00000356141 COX17Q14061 63 aa11.59□□□□□ -0.55
NPAS3-202ENST00000356141 BAALC-AS2P0C853 105 aa11.59□□□□□ -0.55
NPAS3-202ENST00000356141 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.59□□□□□ -0.55
NPAS3-202ENST00000356141 DNAL4O96015 105 aa11.58□□□□□ -0.56
NPAS3-202ENST00000356141 ACYP1P07311 99 aa11.58□□□□□ -0.56
NPAS3-202ENST00000356141 SYCNQ0VAF6 134 aa11.58□□□□□ -0.56
NPAS3-202ENST00000356141 TRBV10-3A0A0K0K1G6 114 aa11.57□□□□□ -0.56
NPAS3-202ENST00000356141 FUSP35637 526 aaKnown RBP eCLIP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 210.3 ms