RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 IGLV1-50A0A075B6I6 118 aa9.49□□□□□ -0.89
PDGFA-201ENST00000354513 NDUFC2-KCTD14E9PQ53 114 aa9.49□□□□□ -0.89
PDGFA-201ENST00000354513 PRSS2P07478 247 aa9.49□□□□□ -0.89
PDGFA-201ENST00000354513 TMEM223A0PJW6 202 aa9.48□□□□□ -0.89
PDGFA-201ENST00000354513 UBE2BP63146 152 aa9.47□□□□□ -0.89
PDGFA-201ENST00000354513 Q8IZM0 81 aa9.47□□□□□ -0.89
PDGFA-201ENST00000354513 COX7B2Q8TF08 81 aa9.47□□□□□ -0.89
PDGFA-201ENST00000354513 IGLV5-39A0A0G2JS06 123 aa9.46□□□□□ -0.9
PDGFA-201ENST00000354513 HERVK_113P61574 105 aa9.46□□□□□ -0.9
PDGFA-201ENST00000354513 C6orf226Q5I0X4 101 aa9.46□□□□□ -0.9
PDGFA-201ENST00000354513 SCGB1D1O95968 90 aa9.45□□□□□ -0.9
PDGFA-201ENST00000354513 AKR1D1P51857 326 aa9.45□□□□□ -0.9
PDGFA-201ENST00000354513 ATOH7Q8N100 152 aa9.45□□□□□ -0.9
PDGFA-201ENST00000354513 CKS1BP61024 79 aa9.44□□□□□ -0.9
PDGFA-201ENST00000354513 MUC2Q02817 5179 aa9.42□□□□□ -0.9
PDGFA-201ENST00000354513 CXCL5P42830 114 aa9.42□□□□□ -0.9
PDGFA-201ENST00000354513 LEPROTO15243 131 aa9.41□□□□□ -0.9
PDGFA-201ENST00000354513 ZNF861PO60384 105 aa9.41□□□□□ -0.9
PDGFA-201ENST00000354513 PLEKHB2Q96CS7 222 aa9.41□□□□□ -0.9
PDGFA-201ENST00000354513 XAGE1AQ9HD64 81 aa9.41□□□□□ -0.9
PDGFA-201ENST00000354513 C22orf24Q9Y442 160 aa9.41□□□□□ -0.9
PDGFA-201ENST00000354513 E9PLD3 99 aa9.39□□□□□ -0.91
PDGFA-201ENST00000354513 RPL13AP40429 203 aaKnown RBP9.39□□□□□ -0.91
PDGFA-201ENST00000354513 JOSD1Q15040 202 aaPredicted RBP9.39□□□□□ -0.91
PDGFA-201ENST00000354513 A0A087X002 238 aa9.38□□□□□ -0.91
PDGFA-201ENST00000354513 J3QQQ9 107 aa9.38□□□□□ -0.91
PDGFA-201ENST00000354513 LGALS3P17931 250 aaKnown RBP9.38□□□□□ -0.91
PDGFA-201ENST00000354513 TSPEAR-AS2P59090 65 aa9.38□□□□□ -0.91
PDGFA-201ENST00000354513 PRR4Q16378 134 aa9.38□□□□□ -0.91
PDGFA-201ENST00000354513 HSBP1L1C9JCN9 74 aa9.37□□□□□ -0.91
PDGFA-201ENST00000354513 ANKRD39Q53RE8 183 aa9.36□□□□□ -0.91
PDGFA-201ENST00000354513 NDUFA12Q9UI09 145 aa9.36□□□□□ -0.91
PDGFA-201ENST00000354513 MUC17Q685J3 4493 aa9.35□□□□□ -0.91
PDGFA-201ENST00000354513 IGKV2D-26A0A0A0MRZ7 120 aa9.35□□□□□ -0.91
PDGFA-201ENST00000354513 MYMXA0A1B0GTQ4 84 aa9.35□□□□□ -0.91
PDGFA-201ENST00000354513 SFTA2Q6UW10 78 aa9.35□□□□□ -0.91
PDGFA-201ENST00000354513 ZNF625Q96I27 306 aaPredicted RBP9.35□□□□□ -0.91
PDGFA-201ENST00000354513 TP73-AS1Q9UF72 201 aa9.35□□□□□ -0.91
PDGFA-201ENST00000354513 NMUP48645 174 aa9.34□□□□□ -0.91
PDGFA-201ENST00000354513 PYY3Q5JQD4 70 aa9.34□□□□□ -0.91
PDGFA-201ENST00000354513 MRPL55Q7Z7F7 128 aaKnown RBP9.33□□□□□ -0.92
PDGFA-201ENST00000354513 BCE1O60756 84 aa9.32□□□□□ -0.92
PDGFA-201ENST00000354513 HERV-K104P63124 156 aa9.32□□□□□ -0.92
PDGFA-201ENST00000354513 LBHQ53QV2 105 aaPredicted RBP9.32□□□□□ -0.92
PDGFA-201ENST00000354513 TSPAN13O95857 204 aa9.31□□□□□ -0.92
PDGFA-201ENST00000354513 KRTAP13-1Q8IUC0 172 aa9.31□□□□□ -0.92
PDGFA-201ENST00000354513 LINC00167Q96N53 147 aa9.31□□□□□ -0.92
PDGFA-201ENST00000354513 TTTY13Q9BZ97 58 aa9.31□□□□□ -0.92
PDGFA-201ENST00000354513 ERG28Q9UKR5 140 aa9.31□□□□□ -0.92
PDGFA-201ENST00000354513 LOC105371267A0A1B0GV96 52 aa9.31□□□□□ -0.92
PDGFA-201ENST00000354513 ZNF815PA8K554 130 aa9.31□□□□□ -0.92
PDGFA-201ENST00000354513 PFN2P35080 140 aa9.31□□□□□ -0.92
PDGFA-201ENST00000354513 KRTAP13-2Q52LG2 175 aa9.31□□□□□ -0.92
PDGFA-201ENST00000354513 MEIG1Q5JSS6 88 aa9.31□□□□□ -0.92
PDGFA-201ENST00000354513 VAMP8Q9BV40 100 aa9.31□□□□□ -0.92
PDGFA-201ENST00000354513 RPL37AP8A6NKH3 93 aa9.3□□□□□ -0.92
PDGFA-201ENST00000354513 PAM16Q9Y3D7 125 aa9.3□□□□□ -0.92
PDGFA-201ENST00000354513 IGLV5-37A0A075B6J1 123 aa9.29□□□□□ -0.92
PDGFA-201ENST00000354513 RPL28P46779 137 aaKnown RBP9.29□□□□□ -0.92
PDGFA-201ENST00000354513 LINC00158P58513 81 aa9.29□□□□□ -0.92
PDGFA-201ENST00000354513 COX17Q14061 63 aa9.29□□□□□ -0.92
PDGFA-201ENST00000354513 PCP2Q8IVA1 136 aa9.29□□□□□ -0.92
PDGFA-201ENST00000354513 ANAPC11Q9NYG5 84 aa9.29□□□□□ -0.92
PDGFA-201ENST00000354513 A0A0U1RRA0 63 aa9.28□□□□□ -0.92
PDGFA-201ENST00000354513 LINC00587B1AMM8 73 aa9.28□□□□□ -0.92
PDGFA-201ENST00000354513 SMIM13P0DJ93 91 aa9.28□□□□□ -0.92
PDGFA-201ENST00000354513 SPATA45Q537H7 98 aa9.28□□□□□ -0.92
PDGFA-201ENST00000354513 A0A0J9YXY3 114 aa9.27□□□□□ -0.93
PDGFA-201ENST00000354513 GAGE10A6NGK3 116 aa9.27□□□□□ -0.93
PDGFA-201ENST00000354513 CRYGAP11844 174 aa9.26□□□□□ -0.93
PDGFA-201ENST00000354513 TYMSOSQ8TAI1 123 aa9.26□□□□□ -0.93
PDGFA-201ENST00000354513 SCGB1D4Q6XE38 83 aa9.25□□□□□ -0.93
PDGFA-201ENST00000354513 FAT4Q6V0I7 4981 aa9.24□□□□□ -0.93
PDGFA-201ENST00000354513 S100A12P80511 92 aa9.24□□□□□ -0.93
PDGFA-201ENST00000354513 LCE2AQ5TA79 106 aaPredicted RBP9.24□□□□□ -0.93
PDGFA-201ENST00000354513 COX8AP10176 69 aa9.23□□□□□ -0.93
PDGFA-201ENST00000354513 MIR7-3HGQ8N6C7 128 aa9.23□□□□□ -0.93
PDGFA-201ENST00000354513 C14orf144Q96I85 54 aa9.23□□□□□ -0.93
PDGFA-201ENST00000354513 SND1-IT1Q9HBX3 110 aa9.23□□□□□ -0.93
PDGFA-201ENST00000354513 SMIM6P0DI80 62 aa9.22□□□□□ -0.93
PDGFA-201ENST00000354513 DAND5Q8N907 189 aa9.22□□□□□ -0.93
PDGFA-201ENST00000354513 RETNLBQ9BQ08 111 aa9.22□□□□□ -0.93
PDGFA-201ENST00000354513 TIMM17BO60830 172 aa9.21□□□□□ -0.94
PDGFA-201ENST00000354513 ADAMTSL4-AS1Q5T5F5 129 aa9.21□□□□□ -0.94
PDGFA-201ENST00000354513 BOD1L2Q8IYS8 172 aa9.21□□□□□ -0.94
PDGFA-201ENST00000354513 Q8NDZ9 215 aa9.21□□□□□ -0.94
PDGFA-201ENST00000354513 FAM229BQ4G0N7 80 aa9.2□□□□□ -0.94
PDGFA-201ENST00000354513 LITAFQ99732 161 aa9.2□□□□□ -0.94
PDGFA-201ENST00000354513 IGKV2-28A0A075B6P5 120 aa9.19□□□□□ -0.94
PDGFA-201ENST00000354513 TMEM238C9JI98 176 aa9.19□□□□□ -0.94
PDGFA-201ENST00000354513 DLEU1O43261 78 aa9.19□□□□□ -0.94
PDGFA-201ENST00000354513 IGKV2D-28P01615 120 aa9.19□□□□□ -0.94
PDGFA-201ENST00000354513 VPREB1P12018 145 aa9.19□□□□□ -0.94
PDGFA-201ENST00000354513 SLC25A34Q6PIV7 304 aa9.19□□□□□ -0.94
PDGFA-201ENST00000354513 NKAPP1Q8N9T2 125 aa9.19□□□□□ -0.94
PDGFA-201ENST00000354513 KRTAP9-2Q9BYQ4 174 aa9.19□□□□□ -0.94
PDGFA-201ENST00000354513 UBE2AP49459 152 aa9.18□□□□□ -0.94
PDGFA-201ENST00000354513 PRLHP81277 87 aa9.18□□□□□ -0.94
PDGFA-201ENST00000354513 NPC2P61916 151 aa9.17□□□□□ -0.94
PDGFA-201ENST00000354513 LINC00304Q8N9R0 145 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms