RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 UBE2AP49459 152 aa9.13□□□□□ -0.95
DDX55-202ENST00000354291 ERG28Q9UKR5 140 aa9.13□□□□□ -0.95
DDX55-202ENST00000354291 TMEM170BQ5T4T1 132 aa9.12□□□□□ -0.95
DDX55-202ENST00000354291 SND1-IT1Q9HBX3 110 aa9.12□□□□□ -0.95
DDX55-202ENST00000354291 C11orf86A6NJI1 115 aa9.11□□□□□ -0.95
DDX55-202ENST00000354291 RPL24P83731 157 aaKnown RBP9.11□□□□□ -0.95
DDX55-202ENST00000354291 LINC00337Q8N6G1 96 aa9.11□□□□□ -0.95
DDX55-202ENST00000354291 KRTAP4-1Q9BYQ7 146 aa9.11□□□□□ -0.95
DDX55-202ENST00000354291 IGKV2-28A0A075B6P5 120 aa9.1□□□□□ -0.95
DDX55-202ENST00000354291 IGKV2D-28P01615 120 aa9.1□□□□□ -0.95
DDX55-202ENST00000354291 KRTAP13-1Q8IUC0 172 aa9.1□□□□□ -0.95
DDX55-202ENST00000354291 ZNF625Q96I27 306 aaPredicted RBP9.1□□□□□ -0.95
DDX55-202ENST00000354291 VPREB1P12018 145 aa9.09□□□□□ -0.95
DDX55-202ENST00000354291 CHCHD1Q96BP2 118 aaKnown RBP9.09□□□□□ -0.95
DDX55-202ENST00000354291 CHTOPQ9Y3Y2 248 aaKnown RBP9.09□□□□□ -0.95
DDX55-202ENST00000354291 SCO1O75880 301 aa9.08□□□□□ -0.96
DDX55-202ENST00000354291 ASB16-AS1Q495Z4 193 aa9.08□□□□□ -0.96
DDX55-202ENST00000354291 TRAV12-1A0A0B4J245 112 aa9.06□□□□□ -0.96
DDX55-202ENST00000354291 TMEM126AQ9H061 195 aa9.06□□□□□ -0.96
DDX55-202ENST00000354291 IGKV2D-26A0A0A0MRZ7 120 aa9.05□□□□□ -0.96
DDX55-202ENST00000354291 LINC00158P58513 81 aa9.05□□□□□ -0.96
DDX55-202ENST00000354291 FAM229BQ4G0N7 80 aa9.05□□□□□ -0.96
DDX55-202ENST00000354291 FAM19A1Q7Z5A9 133 aa9.05□□□□□ -0.96
DDX55-202ENST00000354291 IFI27L1Q96BM0 104 aa9.05□□□□□ -0.96
DDX55-202ENST00000354291 YPEL4Q96NS1 127 aa9.05□□□□□ -0.96
DDX55-202ENST00000354291 TMEM223A0PJW6 202 aa9.04□□□□□ -0.96
DDX55-202ENST00000354291 TMEM238C9JI98 176 aa9.03□□□□□ -0.96
DDX55-202ENST00000354291 PRLHP81277 87 aa9.03□□□□□ -0.96
DDX55-202ENST00000354291 M0R378 163 aa9.02□□□□□ -0.97
DDX55-202ENST00000354291 ATP6V1G1O75348 118 aa9.02□□□□□ -0.97
DDX55-202ENST00000354291 SEC61BP60468 96 aaKnown RBP9.02□□□□□ -0.97
DDX55-202ENST00000354291 Q8NDZ9 215 aa9.01□□□□□ -0.97
DDX55-202ENST00000354291 A0A0U1RRA0 63 aa9□□□□□ -0.97
DDX55-202ENST00000354291 HSBP1O75506 76 aa9□□□□□ -0.97
DDX55-202ENST00000354291 KRTAP9-7A8MTY7 169 aa8.99□□□□□ -0.97
DDX55-202ENST00000354291 LINC00587B1AMM8 73 aa8.99□□□□□ -0.97
DDX55-202ENST00000354291 HERV-K104P63124 156 aa8.99□□□□□ -0.97
DDX55-202ENST00000354291 CTAG1AP78358 180 aa8.99□□□□□ -0.97
DDX55-202ENST00000354291 CBLN2Q8IUK8 224 aa8.99□□□□□ -0.97
DDX55-202ENST00000354291 PLEKHB2Q96CS7 222 aa8.99□□□□□ -0.97
DDX55-202ENST00000354291 SMIM13P0DJ93 91 aa8.98□□□□□ -0.97
DDX55-202ENST00000354291 KRTAP13-3Q3SY46 172 aa8.98□□□□□ -0.97
DDX55-202ENST00000354291 MEIG1Q5JSS6 88 aa8.98□□□□□ -0.97
DDX55-202ENST00000354291 LCE2CQ5TA81 110 aa8.98□□□□□ -0.97
DDX55-202ENST00000354291 FAM19A2Q8N3H0 131 aa8.98□□□□□ -0.97
DDX55-202ENST00000354291 FP248Q71RG6 208 aaPredicted RBP8.97□□□□□ -0.97
DDX55-202ENST00000354291 BOD1L2Q8IYS8 172 aa8.96□□□□□ -0.98
DDX55-202ENST00000354291 HIGD2AQ9BW72 106 aa8.96□□□□□ -0.98
DDX55-202ENST00000354291 NDUFA12Q9UI09 145 aa8.96□□□□□ -0.98
DDX55-202ENST00000354291 MYMXA0A1B0GTQ4 84 aa8.95□□□□□ -0.98
DDX55-202ENST00000354291 TRGC2P03986 189 aa8.95□□□□□ -0.98
DDX55-202ENST00000354291 MIR7-3HGQ8N6C7 128 aa8.95□□□□□ -0.98
DDX55-202ENST00000354291 MAP1LC3CQ9BXW4 147 aa8.95□□□□□ -0.98
DDX55-202ENST00000354291 H0Y8G0 127 aa8.94□□□□□ -0.98
DDX55-202ENST00000354291 LEPROTL1O95214 131 aa8.94□□□□□ -0.98
DDX55-202ENST00000354291 CFC1BP0CG36 223 aa8.94□□□□□ -0.98
DDX55-202ENST00000354291 PRYO14603 147 aa8.93□□□□□ -0.98
DDX55-202ENST00000354291 C3orf22Q8N5N4 141 aa8.93□□□□□ -0.98
DDX55-202ENST00000354291 PLNP26678 52 aa8.92□□□□□ -0.98
DDX55-202ENST00000354291 MT1HP80294 61 aa8.92□□□□□ -0.98
DDX55-202ENST00000354291 SPAG11AQ6PDA7 123 aa8.92□□□□□ -0.98
DDX55-202ENST00000354291 KCNQ1DNQ9H478 68 aa8.92□□□□□ -0.98
DDX55-202ENST00000354291 ZNF706Q9Y5V0 76 aaPredicted RBP8.92□□□□□ -0.98
DDX55-202ENST00000354291 NCR3O14931 201 aa8.91□□□□□ -0.98
DDX55-202ENST00000354291 SERF1AO75920 110 aa8.91□□□□□ -0.98
DDX55-202ENST00000354291 C4orf48Q5BLP8 95 aa8.91□□□□□ -0.98
DDX55-202ENST00000354291 SPRR4Q96PI1 79 aa8.91□□□□□ -0.98
DDX55-202ENST00000354291 HSPB8Q9UJY1 196 aa8.91□□□□□ -0.98
DDX55-202ENST00000354291 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.9□□□□□ -0.98
DDX55-202ENST00000354291 LEPROTO15243 131 aa8.9□□□□□ -0.98
DDX55-202ENST00000354291 SPRR1AP35321 89 aa8.9□□□□□ -0.98
DDX55-202ENST00000354291 S100A12P80511 92 aa8.9□□□□□ -0.98
DDX55-202ENST00000354291 ETDCA0A1B0GVM5 59 aa8.89□□□□□ -0.99
DDX55-202ENST00000354291 LINC00310P59036 64 aa8.89□□□□□ -0.99
DDX55-202ENST00000354291 LOC107984156A0A0G2JMH3 177 aa8.88□□□□□ -0.99
DDX55-202ENST00000354291 HERVK_113P61574 105 aa8.88□□□□□ -0.99
DDX55-202ENST00000354291 ARL17AQ8IVW1 177 aa8.88□□□□□ -0.99
DDX55-202ENST00000354291 TRBV10-3A0A0K0K1G6 114 aa8.87□□□□□ -0.99
DDX55-202ENST00000354291 J3QQQ9 107 aa8.87□□□□□ -0.99
DDX55-202ENST00000354291 DPM2O94777 84 aa8.87□□□□□ -0.99
DDX55-202ENST00000354291 FABP4P15090 132 aa8.87□□□□□ -0.99
DDX55-202ENST00000354291 LORP23490 312 aaPredicted RBP8.87□□□□□ -0.99
DDX55-202ENST00000354291 NMUP48645 174 aa8.87□□□□□ -0.99
DDX55-202ENST00000354291 TSPEAR-AS2P59090 65 aa8.87□□□□□ -0.99
DDX55-202ENST00000354291 KRTAP4-16G5E9R7 235 aaPredicted RBP8.86□□□□□ -0.99
DDX55-202ENST00000354291 KRTAP10-6P60371 365 aaPredicted RBP8.86□□□□□ -0.99
DDX55-202ENST00000354291 SMCR5Q8TEV8 140 aa8.86□□□□□ -0.99
DDX55-202ENST00000354291 TRBV10-2A0A0K0K1G8 114 aa8.85□□□□□ -0.99
DDX55-202ENST00000354291 IGKCP01834 107 aa8.85□□□□□ -0.99
DDX55-202ENST00000354291 KRTAP19-2Q3LHN2 52 aa8.85□□□□□ -0.99
DDX55-202ENST00000354291 DAND5Q8N907 189 aa8.85□□□□□ -0.99
DDX55-202ENST00000354291 LGALS3P17931 250 aaKnown RBP8.84□□□□□ -0.99
DDX55-202ENST00000354291 DDTP30046 118 aa8.84□□□□□ -0.99
DDX55-202ENST00000354291 MIEN1Q9BRT3 115 aa8.84□□□□□ -0.99
DDX55-202ENST00000354291 COLCA2A8K830 154 aa8.83□□□□□ -1
DDX55-202ENST00000354291 PMCHL2Q9BQD1 86 aa8.83□□□□□ -1
DDX55-202ENST00000354291 B5MCH6 92 aa8.82□□□□□ -1
DDX55-202ENST00000354291 SLC7A5P1Q8MH63 180 aa8.82□□□□□ -1
DDX55-202ENST00000354291 SPANXB1Q9NS25 103 aaPredicted RBP8.82□□□□□ -1
DDX55-202ENST00000354291 NDUFC2O95298 119 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms