RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 TM2D3Q9BRN9 247 aa10.69□□□□□ -0.7
LRP8-202ENST00000347547 CD164L2Q6UWJ8 174 aa10.68□□□□□ -0.7
LRP8-202ENST00000347547 CSNK1G2-AS1Q8NCQ2 148 aa10.68□□□□□ -0.7
LRP8-202ENST00000347547 UNC79Q9P2D8 2635 aa10.68□□□□□ -0.7
LRP8-202ENST00000347547 IGLV6-57P01721 117 aa10.67□□□□□ -0.7
LRP8-202ENST00000347547 RPL35AP18077 110 aaKnown RBP10.67□□□□□ -0.7
LRP8-202ENST00000347547 SPATA3Q8NHX4 192 aa10.67□□□□□ -0.7
LRP8-202ENST00000347547 F8WDY8 70 aa10.67□□□□□ -0.7
LRP8-202ENST00000347547 LINC00474Q9P2X8 69 aa10.67□□□□□ -0.7
LRP8-202ENST00000347547 NREPQ16612 68 aa10.66□□□□□ -0.7
LRP8-202ENST00000347547 WFDC11Q8NEX6 87 aa10.66□□□□□ -0.7
LRP8-202ENST00000347547 Q6ZQY7 126 aa10.66□□□□□ -0.7
LRP8-202ENST00000347547 TMEM254Q8TBM7 123 aa10.65□□□□□ -0.7
LRP8-202ENST00000347547 MYO9AB2RTY4 2548 aa10.65□□□□□ -0.7
LRP8-202ENST00000347547 FLNAP21333 2647 aaKnown RBP10.65□□□□□ -0.71
LRP8-202ENST00000347547 C9orf116Q5BN46 136 aaPredicted RBP10.64□□□□□ -0.71
LRP8-202ENST00000347547 CLPSL2Q6UWE3 100 aa10.63□□□□□ -0.71
LRP8-202ENST00000347547 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.62□□□□□ -0.71
LRP8-202ENST00000347547 LINC00612Q8N6U2 182 aa10.62□□□□□ -0.71
LRP8-202ENST00000347547 CCDC168Q8NDH2 2452 aa10.62□□□□□ -0.71
LRP8-202ENST00000347547 BPY2O14599 106 aa10.62□□□□□ -0.71
LRP8-202ENST00000347547 GYPEP15421 78 aa10.62□□□□□ -0.71
LRP8-202ENST00000347547 PKIGQ9Y2B9 76 aa10.62□□□□□ -0.71
LRP8-202ENST00000347547 WNK1Q9H4A3 2382 aa10.61□□□□□ -0.71
LRP8-202ENST00000347547 LINC00269Q8N2A0 174 aa10.61□□□□□ -0.71
LRP8-202ENST00000347547 CHCHD10Q8WYQ3 142 aaPredicted RBP10.61□□□□□ -0.71
LRP8-202ENST00000347547 C2CD3Q4AC94 2353 aa10.61□□□□□ -0.71
LRP8-202ENST00000347547 CCL24O00175 119 aa10.61□□□□□ -0.71
LRP8-202ENST00000347547 CUBNO60494 3623 aa10.6□□□□□ -0.71
LRP8-202ENST00000347547 C19orf73Q9NVV2 129 aa10.6□□□□□ -0.71
LRP8-202ENST00000347547 TLN2Q9Y4G6 2542 aa10.6□□□□□ -0.71
LRP8-202ENST00000347547 KRTAP1-1Q07627 177 aa10.6□□□□□ -0.71
LRP8-202ENST00000347547 ANK3Q12955 4377 aaKnown RBP10.59□□□□□ -0.71
LRP8-202ENST00000347547 A0A0J9YWU9 116 aa10.59□□□□□ -0.71
LRP8-202ENST00000347547 A0A0U1RQV1 116 aa10.59□□□□□ -0.71
LRP8-202ENST00000347547 IGHV4-30-4P0DP06 118 aa10.59□□□□□ -0.71
LRP8-202ENST00000347547 SCXQ7RTU7 201 aa10.59□□□□□ -0.71
LRP8-202ENST00000347547 BRK1Q8WUW1 75 aa10.59□□□□□ -0.71
LRP8-202ENST00000347547 DIRC1Q969H9 104 aa10.58□□□□□ -0.72
LRP8-202ENST00000347547 PRYO14603 147 aa10.57□□□□□ -0.72
LRP8-202ENST00000347547 OCR1Q9BZK8 76 aa10.57□□□□□ -0.72
LRP8-202ENST00000347547 WFDC10AQ9H1F0 79 aa10.57□□□□□ -0.72
LRP8-202ENST00000347547 COX7BP24311 80 aa10.57□□□□□ -0.72
LRP8-202ENST00000347547 NOTCH3Q9UM47 2321 aa10.56□□□□□ -0.72
LRP8-202ENST00000347547 FAM229BQ4G0N7 80 aa10.56□□□□□ -0.72
LRP8-202ENST00000347547 LINC01006Q8NI28 216 aa10.56□□□□□ -0.72
LRP8-202ENST00000347547 DEFB130BP0DP73 79 aa10.55□□□□□ -0.72
LRP8-202ENST00000347547 DEFB130AP0DP74 79 aa10.55□□□□□ -0.72
LRP8-202ENST00000347547 C10orf25Q5T742 122 aa10.55□□□□□ -0.72
LRP8-202ENST00000347547 PRO0255Q9UI72 69 aa10.55□□□□□ -0.72
LRP8-202ENST00000347547 IGKV4-1P06312 121 aa10.54□□□□□ -0.72
LRP8-202ENST00000347547 REG3AQ06141 175 aa10.54□□□□□ -0.72
LRP8-202ENST00000347547 ESRGQ1W209 222 aa10.54□□□□□ -0.72
LRP8-202ENST00000347547 C1orf195Q5TG92 126 aa10.54□□□□□ -0.72
LRP8-202ENST00000347547 UNQ6190/PRO20217Q6UXQ8 127 aa10.54□□□□□ -0.72
LRP8-202ENST00000347547 HECTD1Q9ULT8 2610 aa10.54□□□□□ -0.72
LRP8-202ENST00000347547 FASNP49327 2511 aaKnown RBP10.54□□□□□ -0.72
LRP8-202ENST00000347547 GVQW2A0A096LPI5 108 aaPredicted RBP10.53□□□□□ -0.72
LRP8-202ENST00000347547 FUSP35637 526 aaKnown RBP eCLIP10.53□□□□□ -0.72
LRP8-202ENST00000347547 ELOF1P60002 83 aaKnown RBP10.53□□□□□ -0.72
LRP8-202ENST00000347547 Q6ZTC4 211 aa10.53□□□□□ -0.72
LRP8-202ENST00000347547 SONP18583 2426 aaKnown RBP10.53□□□□□ -0.72
LRP8-202ENST00000347547 NF1P21359 2839 aa10.53□□□□□ -0.72
LRP8-202ENST00000347547 SPAG11BQ08648 103 aa10.53□□□□□ -0.72
LRP8-202ENST00000347547 ACANP16112 2415 aa10.53□□□□□ -0.72
LRP8-202ENST00000347547 IGLV10-54A0A075B6I4 117 aa10.52□□□□□ -0.73
LRP8-202ENST00000347547 ZNF73O43830 326 aaPredicted RBP10.52□□□□□ -0.73
LRP8-202ENST00000347547 IGLV1-51P01701 117 aa10.52□□□□□ -0.73
LRP8-202ENST00000347547 ANGP03950 147 aaKnown RBP10.51□□□□□ -0.73
LRP8-202ENST00000347547 CELA1Q9UNI1 258 aa10.51□□□□□ -0.73
LRP8-202ENST00000347547 CYSRT1A8MQ03 144 aa10.5□□□□□ -0.73
LRP8-202ENST00000347547 V9GYY9 64 aa10.5□□□□□ -0.73
LRP8-202ENST00000347547 NIPBLQ6KC79 2804 aaeCLIP10.5□□□□□ -0.733e-6■■■■■ 31.4
LRP8-202ENST00000347547 MPLKIPQ8TAP9 179 aa10.5□□□□□ -0.73
LRP8-202ENST00000347547 OTOGQ6ZRI0 2925 aa10.49□□□□□ -0.73
LRP8-202ENST00000347547 A0A096LPF7 62 aa10.48□□□□□ -0.73
LRP8-202ENST00000347547 JMJD1CQ15652 2540 aa10.48□□□□□ -0.73
LRP8-202ENST00000347547 SETXQ7Z333 2677 aaKnown RBP10.47□□□□□ -0.73
LRP8-202ENST00000347547 DNAJC9-AS1A6NH13 148 aa10.47□□□□□ -0.73
LRP8-202ENST00000347547 ESM1Q9NQ30 184 aa10.47□□□□□ -0.73
LRP8-202ENST00000347547 Q8N9L7 120 aa10.46□□□□□ -0.74
LRP8-202ENST00000347547 LCE6AA0A183 80 aa10.45□□□□□ -0.74
LRP8-202ENST00000347547 SETD2Q9BYW2 2564 aaPredicted RBP10.44□□□□□ -0.74
LRP8-202ENST00000347547 LINC00528Q8N1L1 170 aa10.43□□□□□ -0.74
LRP8-202ENST00000347547 HIGD2AQ9BW72 106 aa10.43□□□□□ -0.74
LRP8-202ENST00000347547 C6orf48Q9UBA6 75 aa10.43□□□□□ -0.74
LRP8-202ENST00000347547 SEC61GP60059 68 aa10.43□□□□□ -0.74
LRP8-202ENST00000347547 X6R8D5 127 aa10.43□□□□□ -0.74
LRP8-202ENST00000347547 hDV103S1A0JD37 113 aa10.42□□□□□ -0.74
LRP8-202ENST00000347547 MTORP42345 2549 aa10.41□□□□□ -0.74
LRP8-202ENST00000347547 VPREB1P12018 145 aa10.41□□□□□ -0.74
LRP8-202ENST00000347547 LYRM9A8MSI8 78 aa10.41□□□□□ -0.74
LRP8-202ENST00000347547 PRR15Q8IV56 129 aa10.41□□□□□ -0.74
LRP8-202ENST00000347547 XAGE1AQ9HD64 81 aa10.41□□□□□ -0.74
LRP8-202ENST00000347547 PRR34Q9NV39 138 aa10.41□□□□□ -0.74
LRP8-202ENST00000347547 M0R378 163 aa10.4□□□□□ -0.74
LRP8-202ENST00000347547 Q1T7F1 81 aa10.4□□□□□ -0.74
LRP8-202ENST00000347547 HIGD2BQ4VC39 106 aa10.4□□□□□ -0.74
LRP8-202ENST00000347547 A0A1B0GW54 56 aa10.39□□□□□ -0.75
LRP8-202ENST00000347547 SMR3AQ99954 134 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms