RNA–Protein interactions for RNA: ENST00000344425.7

KCNQ2-201, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 1 (best) BASIC

Gene KCNQ2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-201ENST00000344425 C4orf48Q5BLP8 95 aa11.44□□□□□ -0.58
KCNQ2-201ENST00000344425 SFTA2Q6UW10 78 aa11.44□□□□□ -0.58
KCNQ2-201ENST00000344425 FP248Q71RG6 208 aaPredicted RBP11.44□□□□□ -0.58
KCNQ2-201ENST00000344425 ZNF625Q96I27 306 aaPredicted RBP11.44□□□□□ -0.58
KCNQ2-201ENST00000344425 C10orf91Q5T1B1 145 aa11.43□□□□□ -0.58
KCNQ2-201ENST00000344425 LINC00337Q8N6G1 96 aa11.43□□□□□ -0.58
KCNQ2-201ENST00000344425 SPRR4Q96PI1 79 aa11.42□□□□□ -0.58
KCNQ2-201ENST00000344425 ZNF706Q9Y5V0 76 aaPredicted RBP11.42□□□□□ -0.58
KCNQ2-201ENST00000344425 FABP9Q0Z7S8 132 aa11.41□□□□□ -0.58
KCNQ2-201ENST00000344425 Q8NDZ9 215 aa11.41□□□□□ -0.58
KCNQ2-201ENST00000344425 LINC00158P58513 81 aa11.38□□□□□ -0.59
KCNQ2-201ENST00000344425 TMEM170BQ5T4T1 132 aa11.37□□□□□ -0.59
KCNQ2-201ENST00000344425 A0A096LNJ9 63 aa11.35□□□□□ -0.59
KCNQ2-201ENST00000344425 C11orf86A6NJI1 115 aa11.35□□□□□ -0.59
KCNQ2-201ENST00000344425 HBDP02042 147 aa11.35□□□□□ -0.59
KCNQ2-201ENST00000344425 LINC00614P0C842 121 aa11.35□□□□□ -0.59
KCNQ2-201ENST00000344425 KRTAP13-3Q3SY46 172 aa11.35□□□□□ -0.59
KCNQ2-201ENST00000344425 BAGE3Q86Y29 109 aa11.35□□□□□ -0.59
KCNQ2-201ENST00000344425 Q8NBF4 154 aa11.35□□□□□ -0.59
KCNQ2-201ENST00000344425 ASB16-AS1Q495Z4 193 aa11.34□□□□□ -0.59
KCNQ2-201ENST00000344425 DAND5Q8N907 189 aa11.34□□□□□ -0.59
KCNQ2-201ENST00000344425 PRYO14603 147 aa11.33□□□□□ -0.6
KCNQ2-201ENST00000344425 SPINK1P00995 79 aa11.33□□□□□ -0.6
KCNQ2-201ENST00000344425 APOC3P02656 99 aa11.33□□□□□ -0.6
KCNQ2-201ENST00000344425 RHEBQ15382 184 aa11.33□□□□□ -0.6
KCNQ2-201ENST00000344425 SLC7A5P1Q8MH63 180 aa11.33□□□□□ -0.6
KCNQ2-201ENST00000344425 A0A0U1RRA0 63 aa11.32□□□□□ -0.6
KCNQ2-201ENST00000344425 ATP6V1G1O75348 118 aa11.32□□□□□ -0.6
KCNQ2-201ENST00000344425 LINC01547P58512 204 aaPredicted RBP11.32□□□□□ -0.6
KCNQ2-201ENST00000344425 RPS10P5Q9NQ39 176 aa11.32□□□□□ -0.6
KCNQ2-201ENST00000344425 NDUFA5Q16718 116 aa11.3□□□□□ -0.6
KCNQ2-201ENST00000344425 C18orf32Q8TCD1 76 aa11.3□□□□□ -0.6
KCNQ2-201ENST00000344425 SMCR5Q8TEV8 140 aa11.3□□□□□ -0.6
KCNQ2-201ENST00000344425 URB1-AS1Q96HZ7 61 aa11.3□□□□□ -0.6
KCNQ2-201ENST00000344425 SEC61BP60468 96 aaKnown RBP11.29□□□□□ -0.6
KCNQ2-201ENST00000344425 PMCHL1Q16048 86 aa11.29□□□□□ -0.6
KCNQ2-201ENST00000344425 SVBPQ8N300 66 aa11.29□□□□□ -0.6
KCNQ2-201ENST00000344425 ETDCA0A1B0GVM5 59 aa11.28□□□□□ -0.6
KCNQ2-201ENST00000344425 SNAPINO95295 136 aa11.28□□□□□ -0.6
KCNQ2-201ENST00000344425 BOD1L2Q8IYS8 172 aa11.28□□□□□ -0.6
KCNQ2-201ENST00000344425 KCNQ1DNQ9H478 68 aa11.28□□□□□ -0.6
KCNQ2-201ENST00000344425 NDUFA12Q9UI09 145 aa11.28□□□□□ -0.6
KCNQ2-201ENST00000344425 CHTOPQ9Y3Y2 248 aaKnown RBP11.28□□□□□ -0.6
KCNQ2-201ENST00000344425 SPRR1AP35321 89 aa11.27□□□□□ -0.6
KCNQ2-201ENST00000344425 TRAPPC1Q9Y5R8 145 aa11.26□□□□□ -0.61
KCNQ2-201ENST00000344425 TMEM223A0PJW6 202 aa11.26□□□□□ -0.61
KCNQ2-201ENST00000344425 NCR3O14931 201 aa11.26□□□□□ -0.61
KCNQ2-201ENST00000344425 SMIM13P0DJ93 91 aa11.26□□□□□ -0.61
KCNQ2-201ENST00000344425 S100A12P80511 92 aa11.26□□□□□ -0.61
KCNQ2-201ENST00000344425 MEIG1Q5JSS6 88 aa11.26□□□□□ -0.61
KCNQ2-201ENST00000344425 LINC00483Q53H64 154 aa11.25□□□□□ -0.61
KCNQ2-201ENST00000344425 FAM19A2Q8N3H0 131 aa11.24□□□□□ -0.61
KCNQ2-201ENST00000344425 LINC00587B1AMM8 73 aa11.23□□□□□ -0.61
KCNQ2-201ENST00000344425 KRTAP4-16G5E9R7 235 aaPredicted RBP11.23□□□□□ -0.61
KCNQ2-201ENST00000344425 RPS29P62273 56 aaKnown RBP11.23□□□□□ -0.61
KCNQ2-201ENST00000344425 HERV-K104P63124 156 aa11.23□□□□□ -0.61
KCNQ2-201ENST00000344425 GAGE2AQ6NT46 116 aa11.23□□□□□ -0.61
KCNQ2-201ENST00000344425 MIR7-3HGQ8N6C7 128 aa11.23□□□□□ -0.61
KCNQ2-201ENST00000344425 SSBP3-AS1Q7Z2R9 100 aa11.22□□□□□ -0.61
KCNQ2-201ENST00000344425 KRTAP4-1Q9BYQ7 146 aa11.21□□□□□ -0.61
KCNQ2-201ENST00000344425 TRAV12-1A0A0B4J245 112 aa11.2□□□□□ -0.62
KCNQ2-201ENST00000344425 TRBV10-3A0A0K0K1G6 114 aa11.2□□□□□ -0.62
KCNQ2-201ENST00000344425 IGLV9-49A0A0B4J1Y8 123 aa11.19□□□□□ -0.62
KCNQ2-201ENST00000344425 MOBPQ13875 183 aa11.19□□□□□ -0.62
KCNQ2-201ENST00000344425 LCE2DQ5TA82 110 aaPredicted RBP11.19□□□□□ -0.62
KCNQ2-201ENST00000344425 Q8N377 158 aa11.18□□□□□ -0.62
KCNQ2-201ENST00000344425 MAP1LC3CQ9BXW4 147 aa11.18□□□□□ -0.62
KCNQ2-201ENST00000344425 SLC25A20O43772 301 aa11.18□□□□□ -0.62
KCNQ2-201ENST00000344425 B5MCH6 92 aa11.17□□□□□ -0.62
KCNQ2-201ENST00000344425 IFI27L1Q96BM0 104 aa11.17□□□□□ -0.62
KCNQ2-201ENST00000344425 MYMXA0A1B0GTQ4 84 aa11.15□□□□□ -0.62
KCNQ2-201ENST00000344425 ERC2-IT1O76042 136 aa11.14□□□□□ -0.63
KCNQ2-201ENST00000344425 YPEL4Q96NS1 127 aa11.14□□□□□ -0.63
KCNQ2-201ENST00000344425 DDTP30046 118 aa11.13□□□□□ -0.63
KCNQ2-201ENST00000344425 XP32Q5T750 250 aa11.13□□□□□ -0.63
KCNQ2-201ENST00000344425 CHCHD1Q96BP2 118 aaKnown RBP11.13□□□□□ -0.63
KCNQ2-201ENST00000344425 TRBV10-2A0A0K0K1G8 114 aa11.11□□□□□ -0.63
KCNQ2-201ENST00000344425 LOC107984156A0A0G2JMH3 177 aa11.1□□□□□ -0.63
KCNQ2-201ENST00000344425 Q6ZRX8 168 aa11.1□□□□□ -0.63
KCNQ2-201ENST00000344425 ARL17AQ8IVW1 177 aa11.1□□□□□ -0.63
KCNQ2-201ENST00000344425 Q9BRP9 147 aa11.1□□□□□ -0.63
KCNQ2-201ENST00000344425 JOSD1Q15040 202 aaPredicted RBP11.08□□□□□ -0.64
KCNQ2-201ENST00000344425 FSIP2Q5CZC0 6907 aa11.07□□□□□ -0.64
KCNQ2-201ENST00000344425 C9orf153Q5TBE3 101 aa11.07□□□□□ -0.64
KCNQ2-201ENST00000344425 SPANXB1Q9NS25 103 aaPredicted RBP11.07□□□□□ -0.64
KCNQ2-201ENST00000344425 S100A7L2Q5SY68 101 aa11.06□□□□□ -0.64
KCNQ2-201ENST00000344425 MIEN1Q9BRT3 115 aa11.06□□□□□ -0.64
KCNQ2-201ENST00000344425 CRCT1Q9UGL9 99 aa11.06□□□□□ -0.64
KCNQ2-201ENST00000344425 LEPROTO15243 131 aa11.04□□□□□ -0.64
KCNQ2-201ENST00000344425 HSBP1O75506 76 aa11.03□□□□□ -0.64
KCNQ2-201ENST00000344425 H0Y8G0 127 aa11.02□□□□□ -0.64
KCNQ2-201ENST00000344425 NDUFC2O95298 119 aa11.02□□□□□ -0.64
KCNQ2-201ENST00000344425 IGLV6-57P01721 117 aa11.02□□□□□ -0.64
KCNQ2-201ENST00000344425 TSPEAR-AS2P59090 65 aa11.02□□□□□ -0.64
KCNQ2-201ENST00000344425 TRAV23DV6A0A075B6W5 121 aa11.01□□□□□ -0.65
KCNQ2-201ENST00000344425 COLCA2A8K830 154 aa11.01□□□□□ -0.65
KCNQ2-201ENST00000344425 LCE2CQ5TA81 110 aa11.01□□□□□ -0.65
KCNQ2-201ENST00000344425 J3QQQ9 107 aa11□□□□□ -0.65
KCNQ2-201ENST00000344425 NMUP48645 174 aa11□□□□□ -0.65
KCNQ2-201ENST00000344425 C5orf52A6NGY3 159 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms