RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 SLC25A20O43772 301 aa9.24□□□□□ -0.93
TRA2B-202ENST00000342294 LINC00483Q53H64 154 aa9.24□□□□□ -0.93
TRA2B-202ENST00000342294 SCGB3A1Q96QR1 104 aa9.24□□□□□ -0.93
TRA2B-202ENST00000342294 MRPL18Q9H0U6 180 aaKnown RBP9.24□□□□□ -0.93
TRA2B-202ENST00000342294 ERG28Q9UKR5 140 aa9.24□□□□□ -0.93
TRA2B-202ENST00000342294 COX17Q14061 63 aa9.23□□□□□ -0.93
TRA2B-202ENST00000342294 CST9LQ9H4G1 147 aa9.23□□□□□ -0.93
TRA2B-202ENST00000342294 IGLV5-39A0A0G2JS06 123 aa9.22□□□□□ -0.93
TRA2B-202ENST00000342294 PCOTHQ58A44 107 aa9.22□□□□□ -0.93
TRA2B-202ENST00000342294 SMCR5Q8TEV8 140 aa9.22□□□□□ -0.93
TRA2B-202ENST00000342294 IGLV8-61A0A075B6I0 122 aa9.21□□□□□ -0.94
TRA2B-202ENST00000342294 SSBP3-AS1Q7Z2R9 100 aa9.2□□□□□ -0.94
TRA2B-202ENST00000342294 H3BRM9 83 aa9.19□□□□□ -0.94
TRA2B-202ENST00000342294 SPRR1AP35321 89 aa9.19□□□□□ -0.94
TRA2B-202ENST00000342294 MOBPQ13875 183 aa9.19□□□□□ -0.94
TRA2B-202ENST00000342294 PEA15Q15121 130 aa9.19□□□□□ -0.94
TRA2B-202ENST00000342294 KRTAP4-16G5E9R7 235 aaPredicted RBP9.18□□□□□ -0.94
TRA2B-202ENST00000342294 AKAP14Q86UN6 197 aa9.18□□□□□ -0.94
TRA2B-202ENST00000342294 PMVKQ15126 192 aa9.17□□□□□ -0.94
TRA2B-202ENST00000342294 ZNF625Q96I27 306 aaPredicted RBP9.17□□□□□ -0.94
TRA2B-202ENST00000342294 IGLV9-49A0A0B4J1Y8 123 aa9.16□□□□□ -0.94
TRA2B-202ENST00000342294 PRYO14603 147 aa9.16□□□□□ -0.94
TRA2B-202ENST00000342294 GAGE2AQ6NT46 116 aa9.16□□□□□ -0.94
TRA2B-202ENST00000342294 LINC01549A6NIU2 74 aa9.15□□□□□ -0.94
TRA2B-202ENST00000342294 M0R2T5 61 aa9.15□□□□□ -0.94
TRA2B-202ENST00000342294 LINC01546A6NGU7 62 aa9.14□□□□□ -0.95
TRA2B-202ENST00000342294 IGLC3P0DOY3 106 aa9.14□□□□□ -0.95
TRA2B-202ENST00000342294 KCNQ1DNQ9H478 68 aa9.14□□□□□ -0.95
TRA2B-202ENST00000342294 ZNF22P17026 224 aaPredicted RBP9.12□□□□□ -0.95
TRA2B-202ENST00000342294 ERC2-IT1O76042 136 aa9.11□□□□□ -0.95
TRA2B-202ENST00000342294 ETDCA0A1B0GVM5 59 aa9.1□□□□□ -0.95
TRA2B-202ENST00000342294 KIAA1644Q3SXP7 199 aa9.1□□□□□ -0.95
TRA2B-202ENST00000342294 SFTA2Q6UW10 78 aa9.09□□□□□ -0.95
TRA2B-202ENST00000342294 LINC00158P58513 81 aa9.08□□□□□ -0.96
TRA2B-202ENST00000342294 ANAPC16Q96DE5 110 aa9.08□□□□□ -0.96
TRA2B-202ENST00000342294 B5MCH6 92 aa9.07□□□□□ -0.96
TRA2B-202ENST00000342294 MT-ND4LP03901 98 aa9.07□□□□□ -0.96
TRA2B-202ENST00000342294 FLGP20930 4061 aaPredicted RBP9.06□□□□□ -0.96
TRA2B-202ENST00000342294 C9orf92A6NGG3 77 aa9.05□□□□□ -0.96
TRA2B-202ENST00000342294 NCR3O14931 201 aa9.05□□□□□ -0.96
TRA2B-202ENST00000342294 TRBV10-3A0A0K0K1G6 114 aa9.04□□□□□ -0.96
TRA2B-202ENST00000342294 A0A0U1RRA0 63 aa9.04□□□□□ -0.96
TRA2B-202ENST00000342294 BOD1L2Q8IYS8 172 aa9.04□□□□□ -0.96
TRA2B-202ENST00000342294 Q9BRP9 147 aa9.04□□□□□ -0.96
TRA2B-202ENST00000342294 COX6B2Q6YFQ2 88 aa9.02□□□□□ -0.97
TRA2B-202ENST00000342294 TRAV9-1A0A075B6T8 112 aa9.01□□□□□ -0.97
TRA2B-202ENST00000342294 C11orf86A6NJI1 115 aa9.01□□□□□ -0.97
TRA2B-202ENST00000342294 NDUFA6P56556 154 aa9.01□□□□□ -0.97
TRA2B-202ENST00000342294 C9orf153Q5TBE3 101 aa9□□□□□ -0.97
TRA2B-202ENST00000342294 A0A096LNJ9 63 aa8.99□□□□□ -0.97
TRA2B-202ENST00000342294 SMIM13P0DJ93 91 aa8.99□□□□□ -0.97
TRA2B-202ENST00000342294 TMEM170BQ5T4T1 132 aa8.98□□□□□ -0.97
TRA2B-202ENST00000342294 Q6ZRX8 168 aa8.98□□□□□ -0.97
TRA2B-202ENST00000342294 FA2HQ7L5A8 372 aa8.98□□□□□ -0.97
TRA2B-202ENST00000342294 IGLV6-57P01721 117 aa8.97□□□□□ -0.97
TRA2B-202ENST00000342294 MIR7-3HGQ8N6C7 128 aa8.97□□□□□ -0.97
TRA2B-202ENST00000342294 hCG_2014768A0A024R1R8 64 aa8.96□□□□□ -0.98
TRA2B-202ENST00000342294 S100A12P80511 92 aa8.96□□□□□ -0.98
TRA2B-202ENST00000342294 LIMD2Q9BT23 127 aa8.96□□□□□ -0.98
TRA2B-202ENST00000342294 SSPOA2VEC9 5147 aa8.95□□□□□ -0.98
TRA2B-202ENST00000342294 ATP6V1G1O75348 118 aa8.95□□□□□ -0.98
TRA2B-202ENST00000342294 SMCO4Q9NRQ5 59 aa8.95□□□□□ -0.98
TRA2B-202ENST00000342294 BAGE3Q86Y29 109 aa8.93□□□□□ -0.98
TRA2B-202ENST00000342294 TMEM223A0PJW6 202 aa8.92□□□□□ -0.98
TRA2B-202ENST00000342294 DDTP30046 118 aa8.92□□□□□ -0.98
TRA2B-202ENST00000342294 RPL37P61927 97 aaKnown RBP8.92□□□□□ -0.98
TRA2B-202ENST00000342294 MEIG1Q5JSS6 88 aa8.92□□□□□ -0.98
TRA2B-202ENST00000342294 ST20-AS1Q8NBB2 130 aa8.91□□□□□ -0.98
TRA2B-202ENST00000342294 USH2AO75445 5202 aa8.9□□□□□ -0.98
TRA2B-202ENST00000342294 LOC107984156A0A0G2JMH3 177 aa8.9□□□□□ -0.98
TRA2B-202ENST00000342294 TRBV10-2A0A0K0K1G8 114 aa8.9□□□□□ -0.98
TRA2B-202ENST00000342294 HRCT1Q6UXD1 115 aa8.9□□□□□ -0.98
TRA2B-202ENST00000342294 ARL17AQ8IVW1 177 aa8.9□□□□□ -0.98
TRA2B-202ENST00000342294 URB1-AS1Q96HZ7 61 aa8.9□□□□□ -0.98
TRA2B-202ENST00000342294 HERV-K104P63124 156 aa8.89□□□□□ -0.99
TRA2B-202ENST00000342294 C5orf52A6NGY3 159 aa8.88□□□□□ -0.99
TRA2B-202ENST00000342294 LINC00587B1AMM8 73 aa8.87□□□□□ -0.99
TRA2B-202ENST00000342294 HBDP02042 147 aa8.87□□□□□ -0.99
TRA2B-202ENST00000342294 CFC1P0CG37 223 aa8.87□□□□□ -0.99
TRA2B-202ENST00000342294 JOSD1Q15040 202 aaPredicted RBP8.87□□□□□ -0.99
TRA2B-202ENST00000342294 KRTAP9-8Q9BYQ0 159 aa8.87□□□□□ -0.99
TRA2B-202ENST00000342294 CHTOPQ9Y3Y2 248 aaKnown RBP8.87□□□□□ -0.99
TRA2B-202ENST00000342294 SPRR1BP22528 89 aa8.86□□□□□ -0.99
TRA2B-202ENST00000342294 FCGBPQ9Y6R7 5405 aaPredicted RBP8.86□□□□□ -0.99
TRA2B-202ENST00000342294 PMCHL1Q16048 86 aa8.85□□□□□ -0.99
TRA2B-202ENST00000342294 LINC00614P0C842 121 aa8.84□□□□□ -0.99
TRA2B-202ENST00000342294 FABP9Q0Z7S8 132 aa8.84□□□□□ -0.99
TRA2B-202ENST00000342294 MAP1LC3CQ9BXW4 147 aa8.84□□□□□ -0.99
TRA2B-202ENST00000342294 COX19Q49B96 90 aa8.83□□□□□ -1
TRA2B-202ENST00000342294 SPANXB1Q9NS25 103 aaPredicted RBP8.83□□□□□ -1
TRA2B-202ENST00000342294 CD164Q04900 197 aa8.82□□□□□ -1
TRA2B-202ENST00000342294 TRAV23DV6A0A075B6W5 121 aa8.81□□□□□ -1
TRA2B-202ENST00000342294 C1orf195Q5TG92 126 aa8.81□□□□□ -1
TRA2B-202ENST00000342294 Q5XG85 94 aa8.81□□□□□ -1
TRA2B-202ENST00000342294 C18orf32Q8TCD1 76 aa8.81□□□□□ -1
TRA2B-202ENST00000342294 MYMXA0A1B0GTQ4 84 aa8.8□□□□□ -1
TRA2B-202ENST00000342294 ZNF73O43830 326 aaPredicted RBP8.8□□□□□ -1
TRA2B-202ENST00000342294 TRAV12-1A0A0B4J245 112 aa8.79□□□□□ -1
TRA2B-202ENST00000342294 NDUFC2O95298 119 aa8.79□□□□□ -1
TRA2B-202ENST00000342294 S100A7L2Q5SY68 101 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms