RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 FAM19A3Q7Z5A8 133 aa13.33□□□□□ -0.27
SEMA6C-201ENST00000341697 GIG44P09565 113 aaPredicted RBP13.33□□□□□ -0.28
SEMA6C-201ENST00000341697 MGAM2Q2M2H8 2515 aa13.32□□□□□ -0.28
SEMA6C-201ENST00000341697 CFAP46Q8IYW2 2715 aa13.32□□□□□ -0.28
SEMA6C-201ENST00000341697 SPATA3Q8NHX4 192 aa13.31□□□□□ -0.28
SEMA6C-201ENST00000341697 SEC61GP60059 68 aa13.3□□□□□ -0.28
SEMA6C-201ENST00000341697 XGP55808 180 aa13.29□□□□□ -0.28
SEMA6C-201ENST00000341697 GVQW2A0A096LPI5 108 aaPredicted RBP13.29□□□□□ -0.28
SEMA6C-201ENST00000341697 A0A087WSZ3 146 aa13.29□□□□□ -0.28
SEMA6C-201ENST00000341697 J3KT08 172 aa13.29□□□□□ -0.28
SEMA6C-201ENST00000341697 SERP2Q8N6R1 65 aa13.28□□□□□ -0.28
SEMA6C-201ENST00000341697 RTL8CO15255 209 aa13.28□□□□□ -0.28
SEMA6C-201ENST00000341697 C3orf22Q8N5N4 141 aa13.28□□□□□ -0.28
SEMA6C-201ENST00000341697 BRCA2P51587 3418 aa13.28□□□□□ -0.28
SEMA6C-201ENST00000341697 USP24Q9UPU5 2620 aa13.26□□□□□ -0.29
SEMA6C-201ENST00000341697 SOSTDC1Q6X4U4 206 aa13.26□□□□□ -0.29
SEMA6C-201ENST00000341697 CENPEQ02224 2701 aa13.25□□□□□ -0.29
SEMA6C-201ENST00000341697 C16orf90A8MZG2 172 aa13.24□□□□□ -0.29
SEMA6C-201ENST00000341697 LINC00612Q8N6U2 182 aa13.23□□□□□ -0.29
SEMA6C-201ENST00000341697 IGHV6-1A0A0B4J1U7 121 aa13.22□□□□□ -0.29
SEMA6C-201ENST00000341697 FAM236DA0A1B0GTK5 79 aa13.21□□□□□ -0.29
SEMA6C-201ENST00000341697 FAM236CP0DP71 79 aa13.21□□□□□ -0.29
SEMA6C-201ENST00000341697 TRBV7-6A0A0J9YX20 115 aa13.21□□□□□ -0.29
SEMA6C-201ENST00000341697 FAM30AQ9NZY2 134 aa13.21□□□□□ -0.29
SEMA6C-201ENST00000341697 KIAA0087Q14695 138 aa13.2□□□□□ -0.3
SEMA6C-201ENST00000341697 TM2D3Q9BRN9 247 aa13.2□□□□□ -0.3
SEMA6C-201ENST00000341697 PHF5AQ7RTV0 110 aaKnown RBP13.2□□□□□ -0.3
SEMA6C-201ENST00000341697 NDUFC1O43677 76 aa13.19□□□□□ -0.3
SEMA6C-201ENST00000341697 ATRQ13535 2644 aa13.19□□□□□ -0.3
SEMA6C-201ENST00000341697 LIMD2Q9BT23 127 aa13.18□□□□□ -0.3
SEMA6C-201ENST00000341697 SNURFQ9Y675 71 aa13.18□□□□□ -0.3
SEMA6C-201ENST00000341697 ELOF1P60002 83 aaKnown RBP13.17□□□□□ -0.3
SEMA6C-201ENST00000341697 Q6Q795 121 aa13.17□□□□□ -0.3
SEMA6C-201ENST00000341697 Q8N9L7 120 aa13.15□□□□□ -0.3
SEMA6C-201ENST00000341697 MGAQ8IWI9 3026 aa13.15□□□□□ -0.3
SEMA6C-201ENST00000341697 Q6ZVQ6 151 aa13.15□□□□□ -0.3
SEMA6C-201ENST00000341697 COX7CP15954 63 aa13.15□□□□□ -0.3
SEMA6C-201ENST00000341697 Q6ZRP5 223 aa13.14□□□□□ -0.31
SEMA6C-201ENST00000341697 PRUNE2Q8WUY3 3088 aa13.14□□□□□ -0.31
SEMA6C-201ENST00000341697 Q6ZRX8 168 aa13.14□□□□□ -0.31
SEMA6C-201ENST00000341697 LINC01547P58512 204 aaPredicted RBP13.13□□□□□ -0.31
SEMA6C-201ENST00000341697 PRR34Q9NV39 138 aa13.13□□□□□ -0.31
SEMA6C-201ENST00000341697 A0A087WVE0 104 aa13.13□□□□□ -0.31
SEMA6C-201ENST00000341697 DEFB116Q30KQ4 102 aa13.13□□□□□ -0.31
SEMA6C-201ENST00000341697 BPTFQ12830 3046 aa13.12□□□□□ -0.31
SEMA6C-201ENST00000341697 LINC00846Q9NV44 126 aa13.12□□□□□ -0.31
SEMA6C-201ENST00000341697 CHTF8P0CG12 524 aa13.12□□□□□ -0.31
SEMA6C-201ENST00000341697 MAST4O15021 2626 aa13.11□□□□□ -0.31
SEMA6C-201ENST00000341697 FAM218AQ96MZ4 157 aa13.1□□□□□ -0.31
SEMA6C-201ENST00000341697 TRAV7A0A075B6U4 112 aa13.1□□□□□ -0.31
SEMA6C-201ENST00000341697 FAM229AH3BQW9 127 aa13.1□□□□□ -0.31
SEMA6C-201ENST00000341697 MOBPQ13875 183 aa13.1□□□□□ -0.31
SEMA6C-201ENST00000341697 ATP5EP56381 51 aaPredicted RBP13.09□□□□□ -0.31
SEMA6C-201ENST00000341697 LITAFQ99732 161 aa13.09□□□□□ -0.31
SEMA6C-201ENST00000341697 EPM2AB3EWF7 344 aa13.09□□□□□ -0.31
SEMA6C-201ENST00000341697 VPREB1P12018 145 aa13.07□□□□□ -0.32
SEMA6C-201ENST00000341697 LINC00208Q96KT6 92 aa13.07□□□□□ -0.32
SEMA6C-201ENST00000341697 PRR4Q16378 134 aa13.06□□□□□ -0.32
SEMA6C-201ENST00000341697 BCE1O60756 84 aa13.04□□□□□ -0.32
SEMA6C-201ENST00000341697 CRYGAP11844 174 aa13.03□□□□□ -0.32
SEMA6C-201ENST00000341697 FAM168BA1KXE4 195 aa13.02□□□□□ -0.33
SEMA6C-201ENST00000341697 IGLV6-57P01721 117 aa13.02□□□□□ -0.33
SEMA6C-201ENST00000341697 HCG22E2RYF7 251 aa13.01□□□□□ -0.33
SEMA6C-201ENST00000341697 C15orf56Q8N910 161 aa13.01□□□□□ -0.33
SEMA6C-201ENST00000341697 CXCL6P80162 114 aa13.01□□□□□ -0.33
SEMA6C-201ENST00000341697 MPLKIPQ8TAP9 179 aa13□□□□□ -0.33
SEMA6C-201ENST00000341697 CCDC179H3BU77 68 aa13□□□□□ -0.33
SEMA6C-201ENST00000341697 AKAP13Q12802 2813 aa13□□□□□ -0.33
SEMA6C-201ENST00000341697 SPACA4Q8TDM5 124 aa12.99□□□□□ -0.33
SEMA6C-201ENST00000341697 A0A1B0GW54 56 aa12.99□□□□□ -0.33
SEMA6C-201ENST00000341697 ST20-AS1Q8NBB2 130 aa12.99□□□□□ -0.33
SEMA6C-201ENST00000341697 SERTAD4-AS1Q5TG53 156 aa12.99□□□□□ -0.33
SEMA6C-201ENST00000341697 A0A0C4DFX4 3053 aa12.99□□□□□ -0.33
SEMA6C-201ENST00000341697 Q8NBF4 154 aa12.98□□□□□ -0.33
SEMA6C-201ENST00000341697 RETNLBQ9BQ08 111 aa12.98□□□□□ -0.33
SEMA6C-201ENST00000341697 SMCPP49901 116 aaPredicted RBP12.98□□□□□ -0.33
SEMA6C-201ENST00000341697 LINC00476Q8WZB0 136 aa12.98□□□□□ -0.33
SEMA6C-201ENST00000341697 APLNQ9ULZ1 77 aa12.97□□□□□ -0.33
SEMA6C-201ENST00000341697 CR1P17927 2039 aa12.97□□□□□ -0.33
SEMA6C-201ENST00000341697 WDFY4Q6ZS81 3184 aa12.97□□□□□ -0.33
SEMA6C-201ENST00000341697 PRR15LQ9BU68 103 aa12.96□□□□□ -0.34
SEMA6C-201ENST00000341697 IGLV1-50A0A075B6I6 118 aa12.95□□□□□ -0.34
SEMA6C-201ENST00000341697 A0A087WTM6 91 aa12.95□□□□□ -0.34
SEMA6C-201ENST00000341697 V9GYY9 64 aa12.94□□□□□ -0.34
SEMA6C-201ENST00000341697 TYMSOSQ8TAI1 123 aa12.94□□□□□ -0.34
SEMA6C-201ENST00000341697 UNC80Q8N2C7 3258 aa12.94□□□□□ -0.34
SEMA6C-201ENST00000341697 PRO0461Q9UI25 63 aa12.93□□□□□ -0.34
SEMA6C-201ENST00000341697 SPTSSBQ8NFR3 76 aa12.93□□□□□ -0.34
SEMA6C-201ENST00000341697 H0Y9P7 68 aa12.93□□□□□ -0.34
SEMA6C-201ENST00000341697 KCNQ1DNQ9H478 68 aa12.93□□□□□ -0.34
SEMA6C-201ENST00000341697 WIPF1O43516 503 aa12.92□□□□□ -0.34
SEMA6C-201ENST00000341697 Q6ZQT0 140 aa12.92□□□□□ -0.34
SEMA6C-201ENST00000341697 DSPP15924 2871 aaKnown RBP12.92□□□□□ -0.34
SEMA6C-201ENST00000341697 LOC110117498A0A087WWA1 95 aa12.91□□□□□ -0.34
SEMA6C-201ENST00000341697 SERP1Q9Y6X1 66 aa12.91□□□□□ -0.34
SEMA6C-201ENST00000341697 PLA2G1BP04054 148 aaKnown RBP12.9□□□□□ -0.34
SEMA6C-201ENST00000341697 LAMA2P24043 3122 aaKnown RBP12.9□□□□□ -0.34
SEMA6C-201ENST00000341697 C9orf163Q8N9P6 203 aa12.9□□□□□ -0.34
SEMA6C-201ENST00000341697 RPL37AP61513 92 aaKnown RBP12.89□□□□□ -0.35
SEMA6C-201ENST00000341697 CDIP1Q9H305 208 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms