RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 Q6ZQY7 126 aa6.4□□□□□ -1.38
NECAP1-201ENST00000339754 C4orf3Q8WVX3 66 aa6.4□□□□□ -1.38
NECAP1-201ENST00000339754 APCP25054 2843 aa6.4□□□□□ -1.38
NECAP1-201ENST00000339754 C16orf74Q96GX8 76 aa6.4□□□□□ -1.39
NECAP1-201ENST00000339754 BPY2O14599 106 aa6.39□□□□□ -1.39
NECAP1-201ENST00000339754 Q6YL49 198 aa6.39□□□□□ -1.39
NECAP1-201ENST00000339754 MPLKIPQ8TAP9 179 aa6.39□□□□□ -1.39
NECAP1-201ENST00000339754 CHD6Q8TD26 2715 aa6.39□□□□□ -1.39
NECAP1-201ENST00000339754 A0A1B0GUV1 79 aa6.39□□□□□ -1.39
NECAP1-201ENST00000339754 CLPSL2Q6UWE3 100 aa6.39□□□□□ -1.39
NECAP1-201ENST00000339754 V9GYY9 64 aa6.39□□□□□ -1.39
NECAP1-201ENST00000339754 CR1P17927 2039 aa6.38□□□□□ -1.39
NECAP1-201ENST00000339754 ZNF469Q96JG9 3925 aaPredicted RBP6.38□□□□□ -1.39
NECAP1-201ENST00000339754 SEC61GP60059 68 aa6.38□□□□□ -1.39
NECAP1-201ENST00000339754 KRTAP1-3Q8IUG1 177 aa6.38□□□□□ -1.39
NECAP1-201ENST00000339754 MXRA5Q9NR99 2828 aa6.38□□□□□ -1.39
NECAP1-201ENST00000339754 TEX15Q9BXT5 2789 aa6.38□□□□□ -1.39
NECAP1-201ENST00000339754 Q6ZTC4 211 aa6.38□□□□□ -1.39
NECAP1-201ENST00000339754 LINC00269Q8N2A0 174 aa6.38□□□□□ -1.39
NECAP1-201ENST00000339754 LOC100996750A0A140TA64 210 aa6.37□□□□□ -1.39
NECAP1-201ENST00000339754 FSHBP01225 129 aa6.37□□□□□ -1.39
NECAP1-201ENST00000339754 IGLV6-57P01721 117 aa6.37□□□□□ -1.39
NECAP1-201ENST00000339754 KRTAP4-6Q9BYQ5 205 aa6.37□□□□□ -1.39
NECAP1-201ENST00000339754 H3BQ85 93 aa6.37□□□□□ -1.39
NECAP1-201ENST00000339754 OCR1Q9BZK8 76 aa6.36□□□□□ -1.39
NECAP1-201ENST00000339754 CD164L2Q6UWJ8 174 aa6.36□□□□□ -1.39
NECAP1-201ENST00000339754 CSNK1G2-AS1Q8NCQ2 148 aa6.36□□□□□ -1.39
NECAP1-201ENST00000339754 ESRGQ1W209 222 aa6.35□□□□□ -1.39
NECAP1-201ENST00000339754 CUBNO60494 3623 aa6.35□□□□□ -1.39
NECAP1-201ENST00000339754 PRYO14603 147 aa6.35□□□□□ -1.39
NECAP1-201ENST00000339754 KMT2BQ9UMN6 2715 aaPredicted RBP6.35□□□□□ -1.39
NECAP1-201ENST00000339754 J3QKU1 62 aa6.34□□□□□ -1.39
NECAP1-201ENST00000339754 C10orf25Q5T742 122 aa6.34□□□□□ -1.39
NECAP1-201ENST00000339754 Q8N9L7 120 aa6.34□□□□□ -1.39
NECAP1-201ENST00000339754 LINC01006Q8NI28 216 aa6.34□□□□□ -1.39
NECAP1-201ENST00000339754 IGKV4-1P06312 121 aa6.34□□□□□ -1.39
NECAP1-201ENST00000339754 FUSP35637 526 aaKnown RBP eCLIP6.34□□□□□ -1.39
NECAP1-201ENST00000339754 CHCHD10Q8WYQ3 142 aaPredicted RBP6.33□□□□□ -1.4
NECAP1-201ENST00000339754 WFDC10AQ9H1F0 79 aa6.33□□□□□ -1.4
NECAP1-201ENST00000339754 GYPEP15421 78 aa6.33□□□□□ -1.4
NECAP1-201ENST00000339754 UNQ6190/PRO20217Q6UXQ8 127 aa6.33□□□□□ -1.4
NECAP1-201ENST00000339754 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.33□□□□□ -1.4
NECAP1-201ENST00000339754 ITPR3Q14573 2671 aa6.32□□□□□ -1.4
NECAP1-201ENST00000339754 AKAP9Q99996 3911 aa6.32□□□□□ -1.4
NECAP1-201ENST00000339754 WNK1Q9H4A3 2382 aa6.32□□□□□ -1.4
NECAP1-201ENST00000339754 IGLV10-54A0A075B6I4 117 aa6.32□□□□□ -1.4
NECAP1-201ENST00000339754 HIGD2AQ9BW72 106 aa6.32□□□□□ -1.4
NECAP1-201ENST00000339754 COX7BP24311 80 aa6.31□□□□□ -1.4
NECAP1-201ENST00000339754 CCL24O00175 119 aa6.31□□□□□ -1.4
NECAP1-201ENST00000339754 DEFB130BP0DP73 79 aa6.31□□□□□ -1.4
NECAP1-201ENST00000339754 DEFB130AP0DP74 79 aa6.31□□□□□ -1.4
NECAP1-201ENST00000339754 C19orf73Q9NVV2 129 aa6.31□□□□□ -1.4
NECAP1-201ENST00000339754 PDZD2O15018 2839 aa6.31□□□□□ -1.4
NECAP1-201ENST00000339754 SETXQ7Z333 2677 aaKnown RBP6.3□□□□□ -1.4
NECAP1-201ENST00000339754 A0A0J9YWU9 116 aa6.3□□□□□ -1.4
NECAP1-201ENST00000339754 IGHV4-30-4P0DP06 118 aa6.3□□□□□ -1.4
NECAP1-201ENST00000339754 DIRC1Q969H9 104 aa6.3□□□□□ -1.4
NECAP1-201ENST00000339754 A0A096LPF7 62 aa6.3□□□□□ -1.4
NECAP1-201ENST00000339754 TLN2Q9Y4G6 2542 aa6.3□□□□□ -1.4
NECAP1-201ENST00000339754 CCDC168Q8NDH2 2452 aa6.3□□□□□ -1.4
NECAP1-201ENST00000339754 HELZ2Q9BYK8 2649 aaKnown RBP6.29□□□□□ -1.4
NECAP1-201ENST00000339754 hDV103S1A0JD37 113 aa6.29□□□□□ -1.4
NECAP1-201ENST00000339754 ZNF73O43830 326 aaPredicted RBP6.29□□□□□ -1.4
NECAP1-201ENST00000339754 REG3AQ06141 175 aa6.29□□□□□ -1.4
NECAP1-201ENST00000339754 PRR15Q8IV56 129 aa6.29□□□□□ -1.4
NECAP1-201ENST00000339754 LINC00612Q8N6U2 182 aa6.29□□□□□ -1.4
NECAP1-201ENST00000339754 JMJD1CQ15652 2540 aa6.29□□□□□ -1.4
NECAP1-201ENST00000339754 FLNAP21333 2647 aaKnown RBP6.28□□□□□ -1.4
NECAP1-201ENST00000339754 CYSRT1A8MQ03 144 aa6.28□□□□□ -1.4
NECAP1-201ENST00000339754 CMC4P56277 68 aaPredicted RBP6.28□□□□□ -1.4
NECAP1-201ENST00000339754 ELOF1P60002 83 aaKnown RBP6.28□□□□□ -1.4
NECAP1-201ENST00000339754 CELA1Q9UNI1 258 aa6.28□□□□□ -1.4
NECAP1-201ENST00000339754 DAD1P61803 113 aa6.28□□□□□ -1.4
NECAP1-201ENST00000339754 MYO9AB2RTY4 2548 aa6.28□□□□□ -1.4
NECAP1-201ENST00000339754 SONP18583 2426 aaKnown RBP6.27□□□□□ -1.41
NECAP1-201ENST00000339754 ITPR2Q14571 2701 aa6.27□□□□□ -1.41
NECAP1-201ENST00000339754 J3QL48 77 aa6.27□□□□□ -1.41
NECAP1-201ENST00000339754 ANGP03950 147 aaKnown RBP6.27□□□□□ -1.41
NECAP1-201ENST00000339754 SPAG11BQ08648 103 aa6.27□□□□□ -1.41
NECAP1-201ENST00000339754 NIPBLQ6KC79 2804 aaeCLIP6.27□□□□□ -1.41
NECAP1-201ENST00000339754 DNAJC9-AS1A6NH13 148 aa6.27□□□□□ -1.41
NECAP1-201ENST00000339754 Q1T7F1 81 aa6.27□□□□□ -1.41
NECAP1-201ENST00000339754 Q6ZRP5 223 aa6.26□□□□□ -1.41
NECAP1-201ENST00000339754 LCE6AA0A183 80 aa6.26□□□□□ -1.41
NECAP1-201ENST00000339754 KRTAP1-1Q07627 177 aa6.26□□□□□ -1.41
NECAP1-201ENST00000339754 Q6ZRU5 148 aa6.26□□□□□ -1.41
NECAP1-201ENST00000339754 ESM1Q9NQ30 184 aa6.26□□□□□ -1.41
NECAP1-201ENST00000339754 PRO0255Q9UI72 69 aa6.26□□□□□ -1.41
NECAP1-201ENST00000339754 LRCOL1A6NCL2 159 aa6.25□□□□□ -1.41
NECAP1-201ENST00000339754 LCE2CQ5TA81 110 aa6.25□□□□□ -1.41
NECAP1-201ENST00000339754 XAGE1AQ9HD64 81 aa6.25□□□□□ -1.41
NECAP1-201ENST00000339754 GCN1Q92616 2671 aaKnown RBP6.25□□□□□ -1.41
NECAP1-201ENST00000339754 PMAIP1Q13794 54 aa6.25□□□□□ -1.41
NECAP1-201ENST00000339754 KLK12Q9UKR0 248 aa6.25□□□□□ -1.41
NECAP1-201ENST00000339754 GVQW2A0A096LPI5 108 aaPredicted RBP6.24□□□□□ -1.41
NECAP1-201ENST00000339754 C1orf64Q8NEQ6 169 aa6.24□□□□□ -1.41
NECAP1-201ENST00000339754 ANK3Q12955 4377 aaKnown RBP6.24□□□□□ -1.41
NECAP1-201ENST00000339754 NF1P21359 2839 aa6.24□□□□□ -1.41
NECAP1-201ENST00000339754 LINC00528Q8N1L1 170 aa6.24□□□□□ -1.41
NECAP1-201ENST00000339754 FAM30AQ9NZY2 134 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms