RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 FAM236BA0A1B0GV22 79 aa11.93□□□□□ -0.5
LRCH3-201ENST00000334859 Q6ZTC4 211 aa11.93□□□□□ -0.5
LRCH3-201ENST00000334859 STAB1Q9NY15 2570 aa11.93□□□□□ -0.5
LRCH3-201ENST00000334859 A0A1B0GX51 115 aa11.93□□□□□ -0.5
LRCH3-201ENST00000334859 MUC7Q8TAX7 377 aa11.92□□□□□ -0.5
LRCH3-201ENST00000334859 LINC00167Q96N53 147 aa11.92□□□□□ -0.5
LRCH3-201ENST00000334859 CCDC179H3BU77 68 aa11.91□□□□□ -0.5
LRCH3-201ENST00000334859 RPL18AQ02543 176 aaKnown RBP11.91□□□□□ -0.5
LRCH3-201ENST00000334859 FLNBO75369 2602 aaKnown RBP11.91□□□□□ -0.5
LRCH3-201ENST00000334859 TENM3Q9P273 2699 aa11.91□□□□□ -0.5
LRCH3-201ENST00000334859 B5MCH6 92 aa11.9□□□□□ -0.5
LRCH3-201ENST00000334859 C6orf48Q9UBA6 75 aa11.9□□□□□ -0.5
LRCH3-201ENST00000334859 H3BNG1 76 aa11.89□□□□□ -0.51
LRCH3-201ENST00000334859 HIGD2BQ4VC39 106 aa11.89□□□□□ -0.51
LRCH3-201ENST00000334859 XAGE1AQ9HD64 81 aa11.89□□□□□ -0.51
LRCH3-201ENST00000334859 TMEM256-PLSCR3K7ERE1 68 aa11.88□□□□□ -0.51
LRCH3-201ENST00000334859 MAST4O15021 2626 aa11.88□□□□□ -0.51
LRCH3-201ENST00000334859 GVQW2A0A096LPI5 108 aaPredicted RBP11.88□□□□□ -0.51
LRCH3-201ENST00000334859 LINC00846Q9NV44 126 aa11.88□□□□□ -0.51
LRCH3-201ENST00000334859 ZNF561-AS1K7EIQ3 104 aa11.87□□□□□ -0.51
LRCH3-201ENST00000334859 LINC00575Q6W349 94 aa11.86□□□□□ -0.51
LRCH3-201ENST00000334859 JMJD7-PLA2G4BH0Y9G9 81 aa11.85□□□□□ -0.51
LRCH3-201ENST00000334859 IGLV6-57P01721 117 aa11.85□□□□□ -0.51
LRCH3-201ENST00000334859 KRTAP24-1Q3LI83 254 aa11.85□□□□□ -0.51
LRCH3-201ENST00000334859 CAMK2N2Q96S95 79 aa11.85□□□□□ -0.51
LRCH3-201ENST00000334859 ANK2Q01484 3957 aa11.85□□□□□ -0.51
LRCH3-201ENST00000334859 C3orf56Q8N813 242 aa11.84□□□□□ -0.51
LRCH3-201ENST00000334859 EGFEM1PQ0D2K5 195 aa11.84□□□□□ -0.51
LRCH3-201ENST00000334859 FBN1P35555 2871 aaKnown RBP11.83□□□□□ -0.52
LRCH3-201ENST00000334859 hADV29S1A0JD25 119 aa11.83□□□□□ -0.52
LRCH3-201ENST00000334859 CCKP06307 115 aa11.83□□□□□ -0.52
LRCH3-201ENST00000334859 ESRGQ1W209 222 aa11.83□□□□□ -0.52
LRCH3-201ENST00000334859 TRBV10-3A0A0K0K1G6 114 aa11.83□□□□□ -0.52
LRCH3-201ENST00000334859 IGKV3D-7A0A0C4DH55 119 aa11.82□□□□□ -0.52
LRCH3-201ENST00000334859 SS18L2Q9UHA2 77 aa11.81□□□□□ -0.52
LRCH3-201ENST00000334859 NOTCH1P46531 2555 aa11.81□□□□□ -0.52
LRCH3-201ENST00000334859 TRAV23DV6A0A075B6W5 121 aa11.8□□□□□ -0.52
LRCH3-201ENST00000334859 DEFB131BA0A096LNP1 70 aa11.8□□□□□ -0.52
LRCH3-201ENST00000334859 KRTAP26-1Q6PEX3 210 aa11.8□□□□□ -0.52
LRCH3-201ENST00000334859 Q6JHZ5 121 aa11.8□□□□□ -0.52
LRCH3-201ENST00000334859 C1orf43Q9BWL3 253 aa11.8□□□□□ -0.52
LRCH3-201ENST00000334859 C15orf56Q8N910 161 aa11.79□□□□□ -0.52
LRCH3-201ENST00000334859 C11orf45Q8TAV5 145 aa11.79□□□□□ -0.52
LRCH3-201ENST00000334859 Q6ZRU5 148 aa11.79□□□□□ -0.52
LRCH3-201ENST00000334859 DIRC1Q969H9 104 aa11.79□□□□□ -0.52
LRCH3-201ENST00000334859 IGKV2D-24A0A075B6R9 120 aa11.77□□□□□ -0.52
LRCH3-201ENST00000334859 Q6ZQY7 126 aa11.77□□□□□ -0.53
LRCH3-201ENST00000334859 LAMTOR3Q9UHA4 124 aa11.77□□□□□ -0.53
LRCH3-201ENST00000334859 ZNF73O43830 326 aaPredicted RBP11.75□□□□□ -0.53
LRCH3-201ENST00000334859 LINC01556Q5JQF7 62 aa11.75□□□□□ -0.53
LRCH3-201ENST00000334859 CMYA5Q8N3K9 4069 aa11.75□□□□□ -0.53
LRCH3-201ENST00000334859 VPREB1P12018 145 aa11.74□□□□□ -0.53
LRCH3-201ENST00000334859 NDUFC2-KCTD14E9PQ53 114 aa11.74□□□□□ -0.53
LRCH3-201ENST00000334859 RBM3P98179 157 aaKnown RBP11.74□□□□□ -0.53
LRCH3-201ENST00000334859 C2orf48Q96LS8 159 aa11.74□□□□□ -0.53
LRCH3-201ENST00000334859 A0A087WVE0 104 aa11.72□□□□□ -0.53
LRCH3-201ENST00000334859 COX7BP24311 80 aa11.72□□□□□ -0.53
LRCH3-201ENST00000334859 HIST1H4AP62805 103 aaKnown RBP11.71□□□□□ -0.53
LRCH3-201ENST00000334859 M0R378 163 aa11.7□□□□□ -0.54
LRCH3-201ENST00000334859 ATOX1O00244 68 aa11.7□□□□□ -0.54
LRCH3-201ENST00000334859 Q6ZQT0 140 aa11.7□□□□□ -0.54
LRCH3-201ENST00000334859 ELOF1P60002 83 aaKnown RBP11.69□□□□□ -0.54
LRCH3-201ENST00000334859 NBEAL1Q6ZS30 2694 aa11.69□□□□□ -0.54
LRCH3-201ENST00000334859 Q6ZRP5 223 aa11.69□□□□□ -0.54
LRCH3-201ENST00000334859 UBL5Q9BZL1 73 aa11.69□□□□□ -0.54
LRCH3-201ENST00000334859 SYCNQ0VAF6 134 aa11.68□□□□□ -0.54
LRCH3-201ENST00000334859 C9orf153Q5TBE3 101 aa11.68□□□□□ -0.54
LRCH3-201ENST00000334859 C3orf22Q8N5N4 141 aa11.68□□□□□ -0.54
LRCH3-201ENST00000334859 COL6A5A8TX70 2615 aa11.68□□□□□ -0.54
LRCH3-201ENST00000334859 BAHCC1Q9P281 2608 aa11.68□□□□□ -0.54
LRCH3-201ENST00000334859 PRB2P02812 416 aaPredicted RBP11.67□□□□□ -0.54
LRCH3-201ENST00000334859 DSCR8Q96T75 97 aa11.67□□□□□ -0.54
LRCH3-201ENST00000334859 LOC110117498A0A087WWA1 95 aa11.67□□□□□ -0.54
LRCH3-201ENST00000334859 UQCRQO14949 82 aa11.67□□□□□ -0.54
LRCH3-201ENST00000334859 ATP5EP2Q5VTU8 51 aa11.66□□□□□ -0.54
LRCH3-201ENST00000334859 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.66□□□□□ -0.54
LRCH3-201ENST00000334859 H3BQ85 93 aa11.66□□□□□ -0.54
LRCH3-201ENST00000334859 DNAH10OSP0CZ25 163 aa11.66□□□□□ -0.54
LRCH3-201ENST00000334859 DNAH3Q8TD57 4116 aa11.66□□□□□ -0.54
LRCH3-201ENST00000334859 TRBV7-6A0A0J9YX20 115 aa11.65□□□□□ -0.55
LRCH3-201ENST00000334859 TRAV10A0A0B4J240 114 aa11.63□□□□□ -0.55
LRCH3-201ENST00000334859 M0R2N4 97 aa11.63□□□□□ -0.55
LRCH3-201ENST00000334859 COX7CP15954 63 aa11.63□□□□□ -0.55
LRCH3-201ENST00000334859 USP17L23D6RBM5 183 aa11.62□□□□□ -0.55
LRCH3-201ENST00000334859 F8WDY8 70 aa11.62□□□□□ -0.55
LRCH3-201ENST00000334859 NKAPP1Q8N9T2 125 aa11.62□□□□□ -0.55
LRCH3-201ENST00000334859 GHRHP01286 108 aa11.61□□□□□ -0.55
LRCH3-201ENST00000334859 MRAPQ8TCY5 172 aa11.61□□□□□ -0.55
LRCH3-201ENST00000334859 LINC00588Q9Y4M8 146 aa11.61□□□□□ -0.55
LRCH3-201ENST00000334859 LINC00528Q8N1L1 170 aa11.6□□□□□ -0.55
LRCH3-201ENST00000334859 PDE6GP18545 87 aa11.6□□□□□ -0.55
LRCH3-201ENST00000334859 FAM19A1Q7Z5A9 133 aa11.6□□□□□ -0.55
LRCH3-201ENST00000334859 SERTAD4-AS1Q5TG53 156 aa11.58□□□□□ -0.56
LRCH3-201ENST00000334859 UPK3BQ9BT76 320 aa11.57□□□□□ -0.56
LRCH3-201ENST00000334859 CASC10Q5T4H9 136 aa11.56□□□□□ -0.56
LRCH3-201ENST00000334859 Q6ZVQ6 151 aa11.56□□□□□ -0.56
LRCH3-201ENST00000334859 SERP2Q8N6R1 65 aa11.56□□□□□ -0.56
LRCH3-201ENST00000334859 C7orf33Q8WU49 177 aa11.56□□□□□ -0.56
LRCH3-201ENST00000334859 TRBV7-4A0A0J9YYF1 115 aa11.55□□□□□ -0.56
LRCH3-201ENST00000334859 HAMPP81172 84 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms