RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 C6orf99Q4VX62 202 aa10.44□□□□□ -0.74
BRCC3-201ENST00000330045 C9orf153Q5TBE3 101 aa10.44□□□□□ -0.74
BRCC3-201ENST00000330045 Q8NAQ8 132 aa10.44□□□□□ -0.74
BRCC3-201ENST00000330045 S100A7L2Q5SY68 101 aa10.43□□□□□ -0.74
BRCC3-201ENST00000330045 MIFP14174 115 aa10.43□□□□□ -0.74
BRCC3-201ENST00000330045 SPAG11BQ08648 103 aa10.43□□□□□ -0.74
BRCC3-201ENST00000330045 C10orf25Q5T742 122 aa10.43□□□□□ -0.74
BRCC3-201ENST00000330045 UNQ6190/PRO20217Q6UXQ8 127 aa10.43□□□□□ -0.74
BRCC3-201ENST00000330045 C6orf223Q8N319 242 aa10.43□□□□□ -0.74
BRCC3-201ENST00000330045 HTN3P15516 51 aa10.42□□□□□ -0.74
BRCC3-201ENST00000330045 LELP1Q5T871 98 aa10.42□□□□□ -0.74
BRCC3-201ENST00000330045 LINC00526Q96FQ7 95 aa10.42□□□□□ -0.74
BRCC3-201ENST00000330045 ATOX1O00244 68 aa10.42□□□□□ -0.74
BRCC3-201ENST00000330045 SPART-AS1P0CW21 52 aa10.41□□□□□ -0.74
BRCC3-201ENST00000330045 COX7CP15954 63 aa10.41□□□□□ -0.74
BRCC3-201ENST00000330045 SMIM20Q8N5G0 67 aa10.4□□□□□ -0.74
BRCC3-201ENST00000330045 MUC7Q8TAX7 377 aa10.4□□□□□ -0.74
BRCC3-201ENST00000330045 RPL18AQ02543 176 aaKnown RBP10.4□□□□□ -0.75
BRCC3-201ENST00000330045 C2orf48Q96LS8 159 aa10.4□□□□□ -0.75
BRCC3-201ENST00000330045 A0A0J9YWU9 116 aa10.39□□□□□ -0.75
BRCC3-201ENST00000330045 IGHV4-30-4P0DP06 118 aa10.39□□□□□ -0.75
BRCC3-201ENST00000330045 LINC00575Q6W349 94 aa10.39□□□□□ -0.75
BRCC3-201ENST00000330045 KLK12Q9UKR0 248 aa10.39□□□□□ -0.75
BRCC3-201ENST00000330045 OXLD1Q5BKU9 147 aa10.39□□□□□ -0.75
BRCC3-201ENST00000330045 PRR34Q9NV39 138 aa10.39□□□□□ -0.75
BRCC3-201ENST00000330045 A0A087WVE0 104 aa10.38□□□□□ -0.75
BRCC3-201ENST00000330045 hADV29S1A0JD25 119 aa10.36□□□□□ -0.75
BRCC3-201ENST00000330045 WFDC9Q8NEX5 89 aa10.36□□□□□ -0.75
BRCC3-201ENST00000330045 ENHOQ6UWT2 76 aa10.36□□□□□ -0.75
BRCC3-201ENST00000330045 NOTCH1P46531 2555 aa10.36□□□□□ -0.75
BRCC3-201ENST00000330045 IGLV6-57P01721 117 aa10.34□□□□□ -0.75
BRCC3-201ENST00000330045 SVIPQ8NHG7 77 aa10.34□□□□□ -0.75
BRCC3-201ENST00000330045 CRYGAP11844 174 aa10.33□□□□□ -0.76
BRCC3-201ENST00000330045 GVQW2A0A096LPI5 108 aaPredicted RBP10.33□□□□□ -0.76
BRCC3-201ENST00000330045 LYPD5Q6UWN5 251 aa10.33□□□□□ -0.76
BRCC3-201ENST00000330045 USP17L23D6RBM5 183 aa10.32□□□□□ -0.76
BRCC3-201ENST00000330045 KRTAP10-11P60412 298 aa10.32□□□□□ -0.76
BRCC3-201ENST00000330045 RBM3P98179 157 aaKnown RBP10.32□□□□□ -0.76
BRCC3-201ENST00000330045 ATP5EP2Q5VTU8 51 aa10.32□□□□□ -0.76
BRCC3-201ENST00000330045 ZNF561-AS1K7EIQ3 104 aa10.31□□□□□ -0.76
BRCC3-201ENST00000330045 C6orf48Q9UBA6 75 aa10.31□□□□□ -0.76
BRCC3-201ENST00000330045 SERP2Q8N6R1 65 aa10.31□□□□□ -0.76
BRCC3-201ENST00000330045 UBL5Q9BZL1 73 aa10.31□□□□□ -0.76
BRCC3-201ENST00000330045 LAMTOR3Q9UHA4 124 aa10.3□□□□□ -0.76
BRCC3-201ENST00000330045 DNAH3Q8TD57 4116 aa10.3□□□□□ -0.76
BRCC3-201ENST00000330045 Q6ZQT0 140 aa10.3□□□□□ -0.76
BRCC3-201ENST00000330045 XAGE1AQ9HD64 81 aa10.29□□□□□ -0.76
BRCC3-201ENST00000330045 NBEAL1Q6ZS30 2694 aa10.29□□□□□ -0.76
BRCC3-201ENST00000330045 TRBV10-3A0A0K0K1G6 114 aa10.29□□□□□ -0.76
BRCC3-201ENST00000330045 Q6ZQY7 126 aa10.28□□□□□ -0.76
BRCC3-201ENST00000330045 TRAV23DV6A0A075B6W5 121 aa10.28□□□□□ -0.76
BRCC3-201ENST00000330045 LOC110117498A0A087WWA1 95 aa10.28□□□□□ -0.76
BRCC3-201ENST00000330045 WIPF1O43516 503 aa10.28□□□□□ -0.76
BRCC3-201ENST00000330045 DIRC1Q969H9 104 aa10.27□□□□□ -0.77
BRCC3-201ENST00000330045 TENM3Q9P273 2699 aa10.27□□□□□ -0.77
BRCC3-201ENST00000330045 H3BQ85 93 aa10.26□□□□□ -0.77
BRCC3-201ENST00000330045 FAM19A1Q7Z5A9 133 aa10.26□□□□□ -0.77
BRCC3-201ENST00000330045 WFDC10BQ8IUB3 73 aa10.25□□□□□ -0.77
BRCC3-201ENST00000330045 HIGD2BQ4VC39 106 aa10.25□□□□□ -0.77
BRCC3-201ENST00000330045 DSCR8Q96T75 97 aa10.25□□□□□ -0.77
BRCC3-201ENST00000330045 CAMK2N2Q96S95 79 aa10.24□□□□□ -0.77
BRCC3-201ENST00000330045 UPK3BQ9BT76 320 aa10.24□□□□□ -0.77
BRCC3-201ENST00000330045 CYSTM1Q9H1C7 97 aa10.24□□□□□ -0.77
BRCC3-201ENST00000330045 ZNF73O43830 326 aaPredicted RBP10.24□□□□□ -0.77
BRCC3-201ENST00000330045 KPRPQ5T749 579 aaPredicted RBP10.24□□□□□ -0.77
BRCC3-201ENST00000330045 RETNQ9HD89 108 aa10.24□□□□□ -0.77
BRCC3-201ENST00000330045 M0R2N4 97 aa10.23□□□□□ -0.77
BRCC3-201ENST00000330045 H3BNG1 76 aa10.22□□□□□ -0.77
BRCC3-201ENST00000330045 COX7BP24311 80 aa10.22□□□□□ -0.77
BRCC3-201ENST00000330045 GHRHP01286 108 aa10.22□□□□□ -0.77
BRCC3-201ENST00000330045 PRB2P02812 416 aaPredicted RBP10.22□□□□□ -0.77
BRCC3-201ENST00000330045 VPREB1P12018 145 aa10.21□□□□□ -0.77
BRCC3-201ENST00000330045 PDE6GP18545 87 aa10.21□□□□□ -0.77
BRCC3-201ENST00000330045 KRTAP26-1Q6PEX3 210 aa10.21□□□□□ -0.77
BRCC3-201ENST00000330045 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.21□□□□□ -0.77
BRCC3-201ENST00000330045 MGAM2Q2M2H8 2515 aa10.21□□□□□ -0.78
BRCC3-201ENST00000330045 ELOF1P60002 83 aaKnown RBP10.21□□□□□ -0.78
BRCC3-201ENST00000330045 EGFEM1PQ0D2K5 195 aa10.21□□□□□ -0.78
BRCC3-201ENST00000330045 Q6ZRU5 148 aa10.2□□□□□ -0.78
BRCC3-201ENST00000330045 TRBV7-6A0A0J9YX20 115 aa10.19□□□□□ -0.78
BRCC3-201ENST00000330045 Q6ZTC4 211 aa10.18□□□□□ -0.78
BRCC3-201ENST00000330045 Q6ZVQ6 151 aa10.18□□□□□ -0.78
BRCC3-201ENST00000330045 M0R378 163 aa10.18□□□□□ -0.78
BRCC3-201ENST00000330045 LINC01547P58512 204 aaPredicted RBP10.18□□□□□ -0.78
BRCC3-201ENST00000330045 C15orf56Q8N910 161 aa10.18□□□□□ -0.78
BRCC3-201ENST00000330045 HAMPP81172 84 aa10.17□□□□□ -0.78
BRCC3-201ENST00000330045 NDUFC2-KCTD14E9PQ53 114 aa10.16□□□□□ -0.78
BRCC3-201ENST00000330045 TMEM258P61165 79 aa10.16□□□□□ -0.78
BRCC3-201ENST00000330045 LOC107984640A0A0U1RRK4 108 aa10.16□□□□□ -0.78
BRCC3-201ENST00000330045 J3KT08 172 aa10.16□□□□□ -0.78
BRCC3-201ENST00000330045 ESRGQ1W209 222 aa10.16□□□□□ -0.78
BRCC3-201ENST00000330045 TRBV7-4A0A0J9YYF1 115 aa10.15□□□□□ -0.78
BRCC3-201ENST00000330045 C1orf43Q9BWL3 253 aa10.14□□□□□ -0.79
BRCC3-201ENST00000330045 RPS28P62857 69 aaKnown RBP10.13□□□□□ -0.79
BRCC3-201ENST00000330045 CXCL6P80162 114 aa10.12□□□□□ -0.79
BRCC3-201ENST00000330045 Q6ZRP5 223 aa10.12□□□□□ -0.79
BRCC3-201ENST00000330045 LINC00528Q8N1L1 170 aa10.12□□□□□ -0.79
BRCC3-201ENST00000330045 MDFIQ99750 246 aa10.12□□□□□ -0.79
BRCC3-201ENST00000330045 HUWE1Q7Z6Z7 4374 aaKnown RBP10.12□□□□□ -0.79
BRCC3-201ENST00000330045 IGKV2D-24A0A075B6R9 120 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms