RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 PFN2P35080 140 aa13.57□□□□□ -0.24
RIPPLY3-201ENST00000329553 SMIM11BQ8TCY0 68 aa13.55□□□□□ -0.24
RIPPLY3-201ENST00000329553 CXCL5P42830 114 aa13.55□□□□□ -0.24
RIPPLY3-201ENST00000329553 LINC00526Q96FQ7 95 aa13.55□□□□□ -0.24
RIPPLY3-201ENST00000329553 SPAG11BQ08648 103 aa13.54□□□□□ -0.24
RIPPLY3-201ENST00000329553 C6orf223Q8N319 242 aa13.54□□□□□ -0.24
RIPPLY3-201ENST00000329553 KRTAP21-3Q3LHN1 58 aa13.54□□□□□ -0.24
RIPPLY3-201ENST00000329553 PRKDCP78527 4128 aaKnown RBP13.53□□□□□ -0.24
RIPPLY3-201ENST00000329553 C1orf43Q9BWL3 253 aa13.52□□□□□ -0.24
RIPPLY3-201ENST00000329553 Q9HAA7 133 aa13.52□□□□□ -0.24
RIPPLY3-201ENST00000329553 TRBV7-7A0A0K0K1E9 115 aa13.52□□□□□ -0.25
RIPPLY3-201ENST00000329553 UPK3BQ9BT76 320 aa13.51□□□□□ -0.25
RIPPLY3-201ENST00000329553 IGKV2D-24A0A075B6R9 120 aa13.51□□□□□ -0.25
RIPPLY3-201ENST00000329553 C10orf25Q5T742 122 aa13.51□□□□□ -0.25
RIPPLY3-201ENST00000329553 UNQ6190/PRO20217Q6UXQ8 127 aa13.51□□□□□ -0.25
RIPPLY3-201ENST00000329553 H0YGX0 51 aa13.5□□□□□ -0.25
RIPPLY3-201ENST00000329553 C9orf116Q5BN46 136 aaPredicted RBP13.5□□□□□ -0.25
RIPPLY3-201ENST00000329553 APLNQ9ULZ1 77 aa13.5□□□□□ -0.25
RIPPLY3-201ENST00000329553 A0A087WYN8 130 aa13.49□□□□□ -0.25
RIPPLY3-201ENST00000329553 SDIM1Q6ZPB5 146 aa13.49□□□□□ -0.25
RIPPLY3-201ENST00000329553 DYNC2H1Q8NCM8 4307 aaKnown RBP13.48□□□□□ -0.25
RIPPLY3-201ENST00000329553 INAFM2P0DMQ5 153 aa13.47□□□□□ -0.25
RIPPLY3-201ENST00000329553 SMCR5Q8TEV8 140 aa13.47□□□□□ -0.25
RIPPLY3-201ENST00000329553 MEGF8Q7Z7M0 2845 aa13.46□□□□□ -0.25
RIPPLY3-201ENST00000329553 COX17Q14061 63 aa13.46□□□□□ -0.25
RIPPLY3-201ENST00000329553 HIGD2BQ4VC39 106 aa13.46□□□□□ -0.25
RIPPLY3-201ENST00000329553 C15orf56Q8N910 161 aa13.46□□□□□ -0.25
RIPPLY3-201ENST00000329553 DNAL4O96015 105 aa13.45□□□□□ -0.26
RIPPLY3-201ENST00000329553 IMUPQ9GZP8 106 aa13.44□□□□□ -0.26
RIPPLY3-201ENST00000329553 LINC00643Q86TS7 51 aa13.44□□□□□ -0.26
RIPPLY3-201ENST00000329553 ZNF561-AS1K7EIQ3 104 aa13.43□□□□□ -0.26
RIPPLY3-201ENST00000329553 OR13C6PQ8NH95 151 aa13.43□□□□□ -0.26
RIPPLY3-201ENST00000329553 DNAH1Q9P2D7 4330 aa13.43□□□□□ -0.26
RIPPLY3-201ENST00000329553 CSMD3Q7Z407 3707 aa13.42□□□□□ -0.26
RIPPLY3-201ENST00000329553 OBSCN-AS1Q96MR7 158 aa13.41□□□□□ -0.26
RIPPLY3-201ENST00000329553 C6orf48Q9UBA6 75 aa13.41□□□□□ -0.26
RIPPLY3-201ENST00000329553 GVQW2A0A096LPI5 108 aaPredicted RBP13.4□□□□□ -0.26
RIPPLY3-201ENST00000329553 NUPR2A6NF83 97 aa13.4□□□□□ -0.26
RIPPLY3-201ENST00000329553 LECT2O14960 151 aa13.4□□□□□ -0.26
RIPPLY3-201ENST00000329553 LYSTQ99698 3801 aa13.4□□□□□ -0.26
RIPPLY3-201ENST00000329553 CCDC179H3BU77 68 aa13.39□□□□□ -0.27
RIPPLY3-201ENST00000329553 C9orf129Q5T035 196 aaKnown RBP13.39□□□□□ -0.27
RIPPLY3-201ENST00000329553 UBE2DNLQ8IWF7 75 aa13.39□□□□□ -0.27
RIPPLY3-201ENST00000329553 CAMK2N2Q96S95 79 aa13.39□□□□□ -0.27
RIPPLY3-201ENST00000329553 GAGE2AQ6NT46 116 aa13.39□□□□□ -0.27
RIPPLY3-201ENST00000329553 CASC10Q5T4H9 136 aa13.38□□□□□ -0.27
RIPPLY3-201ENST00000329553 NDUFC2O95298 119 aa13.37□□□□□ -0.27
RIPPLY3-201ENST00000329553 PLECQ15149 4684 aaKnown RBP13.37□□□□□ -0.27
RIPPLY3-201ENST00000329553 B5MCH6 92 aa13.37□□□□□ -0.27
RIPPLY3-201ENST00000329553 KRTAP1-5Q9BYS1 174 aa13.37□□□□□ -0.27
RIPPLY3-201ENST00000329553 Q6ZRU5 148 aa13.36□□□□□ -0.27
RIPPLY3-201ENST00000329553 C2orf48Q96LS8 159 aa13.36□□□□□ -0.27
RIPPLY3-201ENST00000329553 RMI2Q96E14 147 aa13.36□□□□□ -0.27
RIPPLY3-201ENST00000329553 DNAH7Q8WXX0 4024 aa13.35□□□□□ -0.27
RIPPLY3-201ENST00000329553 MUC7Q8TAX7 377 aa13.34□□□□□ -0.27
RIPPLY3-201ENST00000329553 C14orf132Q9NPU4 83 aa13.34□□□□□ -0.27
RIPPLY3-201ENST00000329553 PRR3P79522 188 aaKnown RBP13.33□□□□□ -0.27
RIPPLY3-201ENST00000329553 LINC00167Q96N53 147 aa13.33□□□□□ -0.27
RIPPLY3-201ENST00000329553 FAM236AA0A1B0GUQ0 79 aa13.32□□□□□ -0.28
RIPPLY3-201ENST00000329553 FAM236BA0A1B0GV22 79 aa13.32□□□□□ -0.28
RIPPLY3-201ENST00000329553 A0A1B0GX51 115 aa13.32□□□□□ -0.28
RIPPLY3-201ENST00000329553 SLPIP03973 132 aa13.32□□□□□ -0.28
RIPPLY3-201ENST00000329553 Q8NDZ9 215 aa13.32□□□□□ -0.28
RIPPLY3-201ENST00000329553 ORMDL1Q9P0S3 153 aa13.32□□□□□ -0.28
RIPPLY3-201ENST00000329553 USP17L23D6RBM5 183 aa13.31□□□□□ -0.28
RIPPLY3-201ENST00000329553 TMEM126AQ9H061 195 aa13.31□□□□□ -0.28
RIPPLY3-201ENST00000329553 TENM2Q9NT68 2774 aa13.3□□□□□ -0.28
RIPPLY3-201ENST00000329553 STARD9Q9P2P6 4700 aa13.3□□□□□ -0.28
RIPPLY3-201ENST00000329553 F8WDY8 70 aa13.3□□□□□ -0.28
RIPPLY3-201ENST00000329553 SYCNQ0VAF6 134 aa13.29□□□□□ -0.28
RIPPLY3-201ENST00000329553 SS18L2Q9UHA2 77 aa13.29□□□□□ -0.28
RIPPLY3-201ENST00000329553 NCR3O14931 201 aa13.29□□□□□ -0.28
RIPPLY3-201ENST00000329553 Q8N814 137 aa13.28□□□□□ -0.28
RIPPLY3-201ENST00000329553 XAGE1AQ9HD64 81 aa13.28□□□□□ -0.28
RIPPLY3-201ENST00000329553 NDUFC2-KCTD14E9PQ53 114 aa13.25□□□□□ -0.29
RIPPLY3-201ENST00000329553 LINC00846Q9NV44 126 aa13.24□□□□□ -0.29
RIPPLY3-201ENST00000329553 DNAH10Q8IVF4 4471 aa13.23□□□□□ -0.29
RIPPLY3-201ENST00000329553 Q6ZRP5 223 aa13.23□□□□□ -0.29
RIPPLY3-201ENST00000329553 FBN3Q75N90 2809 aa13.22□□□□□ -0.29
RIPPLY3-201ENST00000329553 TMEM256-PLSCR3K7ERE1 68 aa13.21□□□□□ -0.29
RIPPLY3-201ENST00000329553 NBDYA0A0U1RRE5 68 aa13.21□□□□□ -0.29
RIPPLY3-201ENST00000329553 JMJD7-PLA2G4BH0Y9G9 81 aa13.21□□□□□ -0.29
RIPPLY3-201ENST00000329553 C6orf99Q4VX62 202 aa13.21□□□□□ -0.29
RIPPLY3-201ENST00000329553 CCKP06307 115 aa13.2□□□□□ -0.3
RIPPLY3-201ENST00000329553 HIST1H4AP62805 103 aaKnown RBP13.2□□□□□ -0.3
RIPPLY3-201ENST00000329553 Q6JHZ5 121 aa13.2□□□□□ -0.3
RIPPLY3-201ENST00000329553 VPS13DQ5THJ4 4388 aa13.2□□□□□ -0.3
RIPPLY3-201ENST00000329553 PSCAO43653 123 aa13.19□□□□□ -0.3
RIPPLY3-201ENST00000329553 S100A7L2Q5SY68 101 aa13.19□□□□□ -0.3
RIPPLY3-201ENST00000329553 RPL18AQ02543 176 aaKnown RBP13.18□□□□□ -0.3
RIPPLY3-201ENST00000329553 LINC00575Q6W349 94 aa13.17□□□□□ -0.3
RIPPLY3-201ENST00000329553 IGLV6-57P01721 117 aa13.16□□□□□ -0.3
RIPPLY3-201ENST00000329553 TLX1NBP0CAT3 122 aa13.16□□□□□ -0.3
RIPPLY3-201ENST00000329553 VPREB1P12018 145 aa13.16□□□□□ -0.3
RIPPLY3-201ENST00000329553 C3orf22Q8N5N4 141 aa13.14□□□□□ -0.31
RIPPLY3-201ENST00000329553 IGKV3D-7A0A0C4DH55 119 aa13.13□□□□□ -0.31
RIPPLY3-201ENST00000329553 UQCRQO14949 82 aa13.12□□□□□ -0.31
RIPPLY3-201ENST00000329553 M0R2N4 97 aa13.12□□□□□ -0.31
RIPPLY3-201ENST00000329553 hADV29S1A0JD25 119 aa13.11□□□□□ -0.31
RIPPLY3-201ENST00000329553 TRBV10-3A0A0K0K1G6 114 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms