RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 AGRNO00468 2067 aa14.4□□□□□ -0.1
RNF40-201ENST00000324685 TRAV22A0A0B4J277 110 aa14.39□□□□□ -0.11
RNF40-201ENST00000324685 LINC00313P59037 77 aa14.38□□□□□ -0.11
RNF40-201ENST00000324685 C4orf26Q17RF5 130 aa14.38□□□□□ -0.11
RNF40-201ENST00000324685 PHF5AQ7RTV0 110 aaKnown RBP14.37□□□□□ -0.11
RNF40-201ENST00000324685 CACNA1AO00555 2505 aa14.36□□□□□ -0.11
RNF40-201ENST00000324685 EPM2AB3EWF7 344 aa14.35□□□□□ -0.11
RNF40-201ENST00000324685 C16orf90A8MZG2 172 aa14.35□□□□□ -0.11
RNF40-201ENST00000324685 C2CD3Q4AC94 2353 aa14.33□□□□□ -0.12
RNF40-201ENST00000324685 GVQW2A0A096LPI5 108 aaPredicted RBP14.32□□□□□ -0.12
RNF40-201ENST00000324685 SERTAD4-AS1Q5TG53 156 aa14.31□□□□□ -0.12
RNF40-201ENST00000324685 ATP11AUNQ6ZP68 121 aa14.31□□□□□ -0.12
RNF40-201ENST00000324685 TM2D3Q9BRN9 247 aa14.31□□□□□ -0.12
RNF40-201ENST00000324685 RTL8CO15255 209 aa14.3□□□□□ -0.12
RNF40-201ENST00000324685 Q6ZRP5 223 aa14.3□□□□□ -0.12
RNF40-201ENST00000324685 ST20-AS1Q8NBB2 130 aa14.3□□□□□ -0.12
RNF40-201ENST00000324685 TRBV7-4A0A0J9YYF1 115 aa14.29□□□□□ -0.12
RNF40-201ENST00000324685 C8orf87E5RJ46 101 aa14.29□□□□□ -0.12
RNF40-201ENST00000324685 LOC101927531A0A1B0GV80 90 aa14.28□□□□□ -0.12
RNF40-201ENST00000324685 TYMSOSQ8TAI1 123 aa14.26□□□□□ -0.13
RNF40-201ENST00000324685 NBDYA0A0U1RRE5 68 aa14.26□□□□□ -0.13
RNF40-201ENST00000324685 RPL37AP61513 92 aaKnown RBP14.26□□□□□ -0.13
RNF40-201ENST00000324685 LITAFQ99732 161 aa14.24□□□□□ -0.13
RNF40-201ENST00000324685 ERC2-IT1O76042 136 aa14.23□□□□□ -0.13
RNF40-201ENST00000324685 A8MWP4 228 aa14.23□□□□□ -0.13
RNF40-201ENST00000324685 Q8NAQ8 132 aa14.23□□□□□ -0.13
RNF40-201ENST00000324685 IGLV6-57P01721 117 aa14.23□□□□□ -0.13
RNF40-201ENST00000324685 LINC00588Q9Y4M8 146 aa14.22□□□□□ -0.13
RNF40-201ENST00000324685 CHTF8P0CG12 524 aa14.21□□□□□ -0.13
RNF40-201ENST00000324685 FAM229AH3BQW9 127 aa14.21□□□□□ -0.13
RNF40-201ENST00000324685 VPREB1P12018 145 aa14.19□□□□□ -0.14
RNF40-201ENST00000324685 KLK9Q2XQG4 91 aa14.19□□□□□ -0.14
RNF40-201ENST00000324685 Q96NJ1 140 aa14.18□□□□□ -0.14
RNF40-201ENST00000324685 CCDC168Q8NDH2 2452 aa14.16□□□□□ -0.14
RNF40-201ENST00000324685 MRPL34Q9BQ48 92 aaKnown RBP14.16□□□□□ -0.14
RNF40-201ENST00000324685 IGLV8-61A0A075B6I0 122 aa14.14□□□□□ -0.15
RNF40-201ENST00000324685 DNAH10OSP0CZ25 163 aa14.13□□□□□ -0.15
RNF40-201ENST00000324685 CYP4F30PQ9H0H9 118 aa14.13□□□□□ -0.15
RNF40-201ENST00000324685 K7EQZ3 153 aa14.13□□□□□ -0.15
RNF40-201ENST00000324685 PTPRBP23467 1997 aa14.13□□□□□ -0.15
RNF40-201ENST00000324685 SPINT4Q6UDR6 99 aa14.13□□□□□ -0.15
RNF40-201ENST00000324685 TET2Q6N021 2002 aaPredicted RBP14.12□□□□□ -0.15
RNF40-201ENST00000324685 COA5Q86WW8 74 aa14.12□□□□□ -0.15
RNF40-201ENST00000324685 COL4A2P08572 1712 aa14.11□□□□□ -0.15
RNF40-201ENST00000324685 IGLV1-50A0A075B6I6 118 aa14.1□□□□□ -0.15
RNF40-201ENST00000324685 ABCA2Q9BZC7 2435 aa14.09□□□□□ -0.15
RNF40-201ENST00000324685 KRTAP24-1Q3LI83 254 aa14.09□□□□□ -0.15
RNF40-201ENST00000324685 KCNQ1DNQ9H478 68 aa14.08□□□□□ -0.16
RNF40-201ENST00000324685 PLA2G1BP04054 148 aaKnown RBP14.07□□□□□ -0.16
RNF40-201ENST00000324685 MYO18BQ8IUG5 2567 aa14.07□□□□□ -0.16
RNF40-201ENST00000324685 FAM168BA1KXE4 195 aa14.07□□□□□ -0.16
RNF40-201ENST00000324685 LINC01600Q96MT4 127 aa14.06□□□□□ -0.16
RNF40-201ENST00000324685 COL27A1Q8IZC6 1860 aaPredicted RBP14.05□□□□□ -0.16
RNF40-201ENST00000324685 UQCR11O14957 56 aa14.03□□□□□ -0.16
RNF40-201ENST00000324685 A8MUN3 132 aa14.03□□□□□ -0.16
RNF40-201ENST00000324685 LINC00528Q8N1L1 170 aa14.03□□□□□ -0.16
RNF40-201ENST00000324685 IGFL1Q6UW32 110 aa13.99□□□□□ -0.17
RNF40-201ENST00000324685 IGF2RP11717 2491 aa13.98□□□□□ -0.17
RNF40-201ENST00000324685 C8orf17Q9NRJ1 99 aa13.98□□□□□ -0.17
RNF40-201ENST00000324685 SSBP3-AS1Q7Z2R9 100 aa13.97□□□□□ -0.17
RNF40-201ENST00000324685 PRR15Q8IV56 129 aa13.97□□□□□ -0.17
RNF40-201ENST00000324685 NCOR2Q9Y618 2525 aa13.96□□□□□ -0.18
RNF40-201ENST00000324685 CSNK1G2-AS1Q8NCQ2 148 aa13.95□□□□□ -0.18
RNF40-201ENST00000324685 PIEZO2Q9H5I5 2752 aa13.95□□□□□ -0.18
RNF40-201ENST00000324685 KLKP1Q107X0 134 aa13.94□□□□□ -0.18
RNF40-201ENST00000324685 DSCR10P59022 87 aa13.92□□□□□ -0.18
RNF40-201ENST00000324685 WWC2-AS2Q96NR7 200 aa13.92□□□□□ -0.18
RNF40-201ENST00000324685 A0A1B0GVX0 72 aa13.91□□□□□ -0.18
RNF40-201ENST00000324685 MIR22HGQ0VDD5 57 aa13.91□□□□□ -0.18
RNF40-201ENST00000324685 MYO9AB2RTY4 2548 aa13.9□□□□□ -0.18
RNF40-201ENST00000324685 PRR34Q9NV39 138 aa13.9□□□□□ -0.18
RNF40-201ENST00000324685 C15orf56Q8N910 161 aa13.88□□□□□ -0.19
RNF40-201ENST00000324685 CRIPTQ9P021 101 aa13.87□□□□□ -0.19
RNF40-201ENST00000324685 PLA2G2DQ9UNK4 145 aa13.87□□□□□ -0.19
RNF40-201ENST00000324685 DOPEY1Q5JWR5 2465 aa13.86□□□□□ -0.19
RNF40-201ENST00000324685 Q8N377 158 aa13.86□□□□□ -0.19
RNF40-201ENST00000324685 ZNF861PO60384 105 aa13.84□□□□□ -0.19
RNF40-201ENST00000324685 APLNQ9ULZ1 77 aa13.84□□□□□ -0.19
RNF40-201ENST00000324685 LINC00304Q8N9R0 145 aa13.84□□□□□ -0.19
RNF40-201ENST00000324685 TLX1NBP0CAT3 122 aa13.83□□□□□ -0.19
RNF40-201ENST00000324685 C9orf129Q5T035 196 aaKnown RBP13.83□□□□□ -0.19
RNF40-201ENST00000324685 MUC4Q99102 2169 aa13.83□□□□□ -0.2
RNF40-201ENST00000324685 EIF4EBP3O60516 100 aaPredicted RBP13.83□□□□□ -0.2
RNF40-201ENST00000324685 J3QL48 77 aa13.79□□□□□ -0.2
RNF40-201ENST00000324685 OBSCN-AS1Q96MR7 158 aa13.78□□□□□ -0.2
RNF40-201ENST00000324685 C19orf73Q9NVV2 129 aa13.77□□□□□ -0.2
RNF40-201ENST00000324685 H7BZZ5 65 aa13.77□□□□□ -0.21
RNF40-201ENST00000324685 COX6B2Q6YFQ2 88 aa13.76□□□□□ -0.21
RNF40-201ENST00000324685 LINC00612Q8N6U2 182 aa13.76□□□□□ -0.21
RNF40-201ENST00000324685 KRTAP10-11P60412 298 aa13.74□□□□□ -0.21
RNF40-201ENST00000324685 PIEZO1Q92508 2521 aa13.74□□□□□ -0.21
RNF40-201ENST00000324685 TLN1Q9Y490 2541 aaKnown RBP13.74□□□□□ -0.21
RNF40-201ENST00000324685 LRRK2Q5S007 2527 aa13.71□□□□□ -0.21
RNF40-201ENST00000324685 C9orf92A6NGG3 77 aa13.7□□□□□ -0.22
RNF40-201ENST00000324685 K7EIL1 84 aa13.7□□□□□ -0.22
RNF40-201ENST00000324685 CD164Q04900 197 aa13.7□□□□□ -0.22
RNF40-201ENST00000324685 A0A087WTM6 91 aa13.7□□□□□ -0.22
RNF40-201ENST00000324685 SPANXA2-OT1Q8N9U9 137 aa13.69□□□□□ -0.22
RNF40-201ENST00000324685 C9orf163Q8N9P6 203 aa13.69□□□□□ -0.22
RNF40-201ENST00000324685 GIG44P09565 113 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms