RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 TRBV6-8A0A0A6YYG3 113 aa10.91□□□□□ -0.66
USH1C-202ENST00000318024 A0A087WVE0 104 aa10.9□□□□□ -0.66
USH1C-202ENST00000318024 SLPIP03973 132 aa10.9□□□□□ -0.66
USH1C-202ENST00000318024 SERP2Q8N6R1 65 aa10.9□□□□□ -0.66
USH1C-202ENST00000318024 DNHD1Q96M86 4753 aa10.9□□□□□ -0.66
USH1C-202ENST00000318024 TENM3Q9P273 2699 aa10.9□□□□□ -0.66
USH1C-202ENST00000318024 HTN3P15516 51 aa10.9□□□□□ -0.66
USH1C-202ENST00000318024 K7EIL1 84 aa10.89□□□□□ -0.67
USH1C-202ENST00000318024 SPART-AS1P0CW21 52 aa10.89□□□□□ -0.67
USH1C-202ENST00000318024 PFN2P35080 140 aa10.89□□□□□ -0.67
USH1C-202ENST00000318024 NANOS2P60321 138 aaKnown RBP10.89□□□□□ -0.67
USH1C-202ENST00000318024 IGKV3OR2-268A0A0C4DH90 116 aa10.89□□□□□ -0.67
USH1C-202ENST00000318024 CCKP06307 115 aa10.89□□□□□ -0.67
USH1C-202ENST00000318024 A0A096LPF7 62 aa10.88□□□□□ -0.67
USH1C-202ENST00000318024 PAX4O43316 350 aa10.88□□□□□ -0.67
USH1C-202ENST00000318024 GYPEP15421 78 aa10.88□□□□□ -0.67
USH1C-202ENST00000318024 LINC00959A0A1B0GUT2 108 aa10.88□□□□□ -0.67
USH1C-202ENST00000318024 ORMDL1Q9P0S3 153 aa10.88□□□□□ -0.67
USH1C-202ENST00000318024 USP17L23D6RBM5 183 aa10.87□□□□□ -0.67
USH1C-202ENST00000318024 PRO0255Q9UI72 69 aa10.87□□□□□ -0.67
USH1C-202ENST00000318024 LYPD5Q6UWN5 251 aa10.85□□□□□ -0.67
USH1C-202ENST00000318024 TMEM258P61165 79 aa10.85□□□□□ -0.67
USH1C-202ENST00000318024 A0A0J9YWU9 116 aa10.84□□□□□ -0.67
USH1C-202ENST00000318024 DPH3Q96FX2 82 aa10.84□□□□□ -0.67
USH1C-202ENST00000318024 Q8IZM0 81 aa10.83□□□□□ -0.68
USH1C-202ENST00000318024 HUWE1Q7Z6Z7 4374 aaKnown RBP10.82□□□□□ -0.68
USH1C-202ENST00000318024 Q8N814 137 aa10.82□□□□□ -0.68
USH1C-202ENST00000318024 C6orf226Q5I0X4 101 aa10.82□□□□□ -0.68
USH1C-202ENST00000318024 KPRPQ5T749 579 aaPredicted RBP10.82□□□□□ -0.68
USH1C-202ENST00000318024 JMJD7-PLA2G4BH0Y9G9 81 aa10.81□□□□□ -0.68
USH1C-202ENST00000318024 OXTP01178 125 aa10.81□□□□□ -0.68
USH1C-202ENST00000318024 Q6ZTC4 211 aa10.8□□□□□ -0.68
USH1C-202ENST00000318024 NDUFC2O95298 119 aa10.8□□□□□ -0.68
USH1C-202ENST00000318024 ATP5EP2Q5VTU8 51 aa10.8□□□□□ -0.68
USH1C-202ENST00000318024 A0A1B0GUV1 79 aa10.79□□□□□ -0.68
USH1C-202ENST00000318024 KIAA0087Q14695 138 aa10.79□□□□□ -0.68
USH1C-202ENST00000318024 C11orf68Q9H3H3 251 aaKnown RBP10.79□□□□□ -0.68
USH1C-202ENST00000318024 PRR3P79522 188 aaKnown RBP10.78□□□□□ -0.68
USH1C-202ENST00000318024 S100A7L2Q5SY68 101 aa10.78□□□□□ -0.68
USH1C-202ENST00000318024 TMEM256-PLSCR3K7ERE1 68 aa10.78□□□□□ -0.68
USH1C-202ENST00000318024 XCL1P47992 114 aa10.77□□□□□ -0.68
USH1C-202ENST00000318024 TRBV10-3A0A0K0K1G6 114 aa10.76□□□□□ -0.69
USH1C-202ENST00000318024 TM2D3Q9BRN9 247 aa10.76□□□□□ -0.69
USH1C-202ENST00000318024 Q8NDZ9 215 aa10.76□□□□□ -0.69
USH1C-202ENST00000318024 C11orf45Q8TAV5 145 aa10.76□□□□□ -0.69
USH1C-202ENST00000318024 FAM19A1Q7Z5A9 133 aa10.75□□□□□ -0.69
USH1C-202ENST00000318024 DSCR8Q96T75 97 aa10.74□□□□□ -0.69
USH1C-202ENST00000318024 COX17Q14061 63 aa10.74□□□□□ -0.69
USH1C-202ENST00000318024 COL7A1Q02388 2944 aa10.73□□□□□ -0.69
USH1C-202ENST00000318024 GHRHP01286 108 aa10.73□□□□□ -0.69
USH1C-202ENST00000318024 DNAH9Q9NYC9 4486 aa10.73□□□□□ -0.69
USH1C-202ENST00000318024 SEC61GP60059 68 aa10.72□□□□□ -0.69
USH1C-202ENST00000318024 ENHOQ6UWT2 76 aa10.72□□□□□ -0.69
USH1C-202ENST00000318024 NDUFC2-KCTD14E9PQ53 114 aa10.71□□□□□ -0.69
USH1C-202ENST00000318024 Q8N3U1 123 aa10.71□□□□□ -0.69
USH1C-202ENST00000318024 TRAV23DV6A0A075B6W5 121 aa10.7□□□□□ -0.7
USH1C-202ENST00000318024 LINC00575Q6W349 94 aa10.7□□□□□ -0.7
USH1C-202ENST00000318024 Q6ZQT0 140 aa10.7□□□□□ -0.7
USH1C-202ENST00000318024 DEFB131BA0A096LNP1 70 aa10.7□□□□□ -0.7
USH1C-202ENST00000318024 C6orf99Q4VX62 202 aa10.7□□□□□ -0.7
USH1C-202ENST00000318024 CLPSL2Q6UWE3 100 aa10.7□□□□□ -0.7
USH1C-202ENST00000318024 PRO0628Q9UI54 55 aa10.7□□□□□ -0.7
USH1C-202ENST00000318024 CD164L2Q6UWJ8 174 aa10.69□□□□□ -0.7
USH1C-202ENST00000318024 Q5XG85 94 aa10.69□□□□□ -0.7
USH1C-202ENST00000318024 LOC110117498A0A087WWA1 95 aa10.68□□□□□ -0.7
USH1C-202ENST00000318024 UBL5Q9BZL1 73 aa10.68□□□□□ -0.7
USH1C-202ENST00000318024 C9orf116Q5BN46 136 aaPredicted RBP10.68□□□□□ -0.7
USH1C-202ENST00000318024 C6orf223Q8N319 242 aa10.68□□□□□ -0.7
USH1C-202ENST00000318024 BCE1O60756 84 aa10.67□□□□□ -0.7
USH1C-202ENST00000318024 M0R2N4 97 aa10.66□□□□□ -0.7
USH1C-202ENST00000318024 HRCT1Q6UXD1 115 aa10.66□□□□□ -0.7
USH1C-202ENST00000318024 EPM2AB3EWF7 344 aa10.65□□□□□ -0.7
USH1C-202ENST00000318024 C4orf26Q17RF5 130 aa10.65□□□□□ -0.7
USH1C-202ENST00000318024 ZNF561-AS1K7EIQ3 104 aa10.65□□□□□ -0.71
USH1C-202ENST00000318024 LINC00269Q8N2A0 174 aa10.65□□□□□ -0.71
USH1C-202ENST00000318024 CHCHD10Q8WYQ3 142 aaPredicted RBP10.65□□□□□ -0.71
USH1C-202ENST00000318024 PRKDCP78527 4128 aaKnown RBP10.64□□□□□ -0.71
USH1C-202ENST00000318024 RBM3P98179 157 aaKnown RBP10.64□□□□□ -0.71
USH1C-202ENST00000318024 STAB2Q8WWQ8 2551 aa10.64□□□□□ -0.71
USH1C-202ENST00000318024 LELP1Q5T871 98 aa10.63□□□□□ -0.71
USH1C-202ENST00000318024 MEGF8Q7Z7M0 2845 aa10.62□□□□□ -0.71
USH1C-202ENST00000318024 C20orf197Q8N268 126 aa10.62□□□□□ -0.71
USH1C-202ENST00000318024 IGLV6-57P01721 117 aa10.62□□□□□ -0.71
USH1C-202ENST00000318024 ANGP03950 147 aaKnown RBP10.62□□□□□ -0.71
USH1C-202ENST00000318024 B9D2Q9BPU9 175 aa10.62□□□□□ -0.71
USH1C-202ENST00000318024 TRAV7A0A075B6U4 112 aa10.61□□□□□ -0.71
USH1C-202ENST00000318024 H3BNG1 76 aa10.61□□□□□ -0.71
USH1C-202ENST00000318024 H7BZZ5 65 aa10.61□□□□□ -0.71
USH1C-202ENST00000318024 LINC01547P58512 204 aaPredicted RBP10.61□□□□□ -0.71
USH1C-202ENST00000318024 ESRGQ1W209 222 aa10.61□□□□□ -0.71
USH1C-202ENST00000318024 C10orf25Q5T742 122 aa10.61□□□□□ -0.71
USH1C-202ENST00000318024 TRAV10A0A0B4J240 114 aa10.6□□□□□ -0.71
USH1C-202ENST00000318024 Q6ZVQ6 151 aa10.6□□□□□ -0.71
USH1C-202ENST00000318024 MUC7Q8TAX7 377 aa10.6□□□□□ -0.71
USH1C-202ENST00000318024 REG3AQ06141 175 aa10.6□□□□□ -0.71
USH1C-202ENST00000318024 V9GYY9 64 aa10.6□□□□□ -0.71
USH1C-202ENST00000318024 IGLV10-54A0A075B6I4 117 aa10.59□□□□□ -0.71
USH1C-202ENST00000318024 WFDC10BQ8IUB3 73 aa10.59□□□□□ -0.71
USH1C-202ENST00000318024 C1orf43Q9BWL3 253 aa10.59□□□□□ -0.71
USH1C-202ENST00000318024 UNQ6190/PRO20217Q6UXQ8 127 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms