RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 ZNF22P17026 224 aaPredicted RBP2.41□□□□□ -2.02
SMCO3-201ENST00000316048 DAD1P61803 113 aa2.41□□□□□ -2.02
SMCO3-201ENST00000316048 HERVK_113P63121 156 aa2.41□□□□□ -2.02
SMCO3-201ENST00000316048 DEFB135Q30KP9 77 aa2.41□□□□□ -2.02
SMCO3-201ENST00000316048 TTC32Q5I0X7 151 aa2.41□□□□□ -2.02
SMCO3-201ENST00000316048 FAM222AQ5U5X8 452 aa2.41□□□□□ -2.02
SMCO3-201ENST00000316048 LINC00337Q8N6G1 96 aa2.41□□□□□ -2.02
SMCO3-201ENST00000316048 ATP6V0E2Q8NHE4 81 aa2.41□□□□□ -2.02
SMCO3-201ENST00000316048 TRBV6-8A0A0A6YYG3 113 aa2.4□□□□□ -2.03
SMCO3-201ENST00000316048 IGHV1-58A0A0C4DH39 117 aa2.4□□□□□ -2.03
SMCO3-201ENST00000316048 UBE2D1P51668 147 aa2.4□□□□□ -2.03
SMCO3-201ENST00000316048 Q5XG85 94 aa2.4□□□□□ -2.03
SMCO3-201ENST00000316048 KRTAP5-11Q6L8G4 156 aa2.4□□□□□ -2.03
SMCO3-201ENST00000316048 Q6ZUT4 128 aa2.4□□□□□ -2.03
SMCO3-201ENST00000316048 GTF2H5Q6ZYL4 71 aa2.4□□□□□ -2.03
SMCO3-201ENST00000316048 FAM19A3Q7Z5A8 133 aa2.4□□□□□ -2.03
SMCO3-201ENST00000316048 SBSPONQ8IVN8 264 aa2.4□□□□□ -2.03
SMCO3-201ENST00000316048 CDC42SE2Q9NRR3 84 aa2.4□□□□□ -2.03
SMCO3-201ENST00000316048 HECTD1Q9ULT8 2610 aa2.4□□□□□ -2.03
SMCO3-201ENST00000316048 IGHV3-64A0A075B6Q5 118 aa2.39□□□□□ -2.03
SMCO3-201ENST00000316048 A0A0J9YY99 117 aa2.39□□□□□ -2.03
SMCO3-201ENST00000316048 ATP5G1P05496 136 aa2.39□□□□□ -2.03
SMCO3-201ENST00000316048 IGHV3-30-3P0DP02 117 aa2.39□□□□□ -2.03
SMCO3-201ENST00000316048 RAB37Q96AX2 223 aa2.39□□□□□ -2.03
SMCO3-201ENST00000316048 SND1-IT1Q9HBX3 110 aa2.39□□□□□ -2.03
SMCO3-201ENST00000316048 NHP2Q9NX24 153 aaKnown RBP2.39□□□□□ -2.03
SMCO3-201ENST00000316048 TRAV13-1A0A0B4J241 112 aa2.39□□□□□ -2.03
SMCO3-201ENST00000316048 TMEM262E9PQX1 116 aa2.39□□□□□ -2.03
SMCO3-201ENST00000316048 H3BUT2 72 aa2.39□□□□□ -2.03
SMCO3-201ENST00000316048 DEFB4AO15263 64 aa2.39□□□□□ -2.03
SMCO3-201ENST00000316048 LINC00694P0DN24 101 aa2.39□□□□□ -2.03
SMCO3-201ENST00000316048 FXYD2P54710 66 aa2.39□□□□□ -2.03
SMCO3-201ENST00000316048 CIRBPQ14011 172 aaKnown RBP2.39□□□□□ -2.03
SMCO3-201ENST00000316048 C12orf74Q32Q52 190 aa2.39□□□□□ -2.03
SMCO3-201ENST00000316048 Q8NAQ8 132 aa2.39□□□□□ -2.03
SMCO3-201ENST00000316048 CDKN2A-AS1Q9UH64 79 aa2.39□□□□□ -2.03
SMCO3-201ENST00000316048 ANK3Q12955 4377 aaKnown RBP2.39□□□□□ -2.03
SMCO3-201ENST00000316048 CUBNO60494 3623 aa2.38□□□□□ -2.03
SMCO3-201ENST00000316048 AKAP9Q99996 3911 aa2.38□□□□□ -2.03
SMCO3-201ENST00000316048 FN1P02751 2386 aaKnown RBP2.38□□□□□ -2.03
SMCO3-201ENST00000316048 TRAV8-3A0A0A6YYJ7 113 aa2.38□□□□□ -2.03
SMCO3-201ENST00000316048 SPINK8P0C7L1 97 aa2.38□□□□□ -2.03
SMCO3-201ENST00000316048 FABP2P12104 132 aa2.38□□□□□ -2.03
SMCO3-201ENST00000316048 TSPEAR-AS2P59090 65 aa2.38□□□□□ -2.03
SMCO3-201ENST00000316048 LUZP6Q538Z0 58 aa2.38□□□□□ -2.03
SMCO3-201ENST00000316048 NDUFA12Q9UI09 145 aa2.38□□□□□ -2.03
SMCO3-201ENST00000316048 MTORP42345 2549 aa2.38□□□□□ -2.03
SMCO3-201ENST00000316048 OTOGQ6ZRI0 2925 aa2.38□□□□□ -2.03
SMCO3-201ENST00000316048 IGKV2D-24A0A075B6R9 120 aa2.38□□□□□ -2.03
SMCO3-201ENST00000316048 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.38□□□□□ -2.03
SMCO3-201ENST00000316048 A0A1W2PPM0 123 aa2.38□□□□□ -2.03
SMCO3-201ENST00000316048 IGHV3-30P01768 117 aa2.38□□□□□ -2.03
SMCO3-201ENST00000316048 IGHV3-30-5P0DP03 117 aa2.38□□□□□ -2.03
SMCO3-201ENST00000316048 COX6A2Q02221 97 aa2.38□□□□□ -2.03
SMCO3-201ENST00000316048 MOBPQ13875 183 aa2.38□□□□□ -2.03
SMCO3-201ENST00000316048 SS18Q15532 418 aa2.38□□□□□ -2.03
SMCO3-201ENST00000316048 COPS9Q8WXC6 57 aa2.38□□□□□ -2.03
SMCO3-201ENST00000316048 ANAPC13Q9BS18 74 aa2.38□□□□□ -2.03
SMCO3-201ENST00000316048 SETXQ7Z333 2677 aaKnown RBP2.37□□□□□ -2.03
SMCO3-201ENST00000316048 NF1P21359 2839 aa2.37□□□□□ -2.03
SMCO3-201ENST00000316048 A0A096LPF7 62 aa2.37□□□□□ -2.03
SMCO3-201ENST00000316048 IGLL5B9A064 214 aa2.37□□□□□ -2.03
SMCO3-201ENST00000316048 NDUFA1O15239 70 aa2.37□□□□□ -2.03
SMCO3-201ENST00000316048 TIMM17BO60830 172 aa2.37□□□□□ -2.03
SMCO3-201ENST00000316048 IFITM1P13164 125 aa2.37□□□□□ -2.03
SMCO3-201ENST00000316048 HTN3P15516 51 aa2.37□□□□□ -2.03
SMCO3-201ENST00000316048 MUSTN1Q8IVN3 82 aa2.37□□□□□ -2.03
SMCO3-201ENST00000316048 RBM12B-AS1Q9P1G2 102 aa2.37□□□□□ -2.03
SMCO3-201ENST00000316048 SPCS1Q9Y6A9 102 aa2.37□□□□□ -2.03
SMCO3-201ENST00000316048 ICOSQ9Y6W8 199 aa2.37□□□□□ -2.03
SMCO3-201ENST00000316048 NOTCH2Q04721 2471 aa2.37□□□□□ -2.03
SMCO3-201ENST00000316048 C2CD3Q4AC94 2353 aa2.36□□□□□ -2.03
SMCO3-201ENST00000316048 IGLV4-60A0A075B6I1 120 aa2.36□□□□□ -2.03
SMCO3-201ENST00000316048 IGKV3OR2-268A0A0C4DH90 116 aa2.36□□□□□ -2.03
SMCO3-201ENST00000316048 LINC00959A0A1B0GUT2 108 aa2.36□□□□□ -2.03
SMCO3-201ENST00000316048 H3BNG1 76 aa2.36□□□□□ -2.03
SMCO3-201ENST00000316048 CCDC179H3BU77 68 aa2.36□□□□□ -2.03
SMCO3-201ENST00000316048 K7EP34 96 aa2.36□□□□□ -2.03
SMCO3-201ENST00000316048 K7ERJ3 54 aa2.36□□□□□ -2.03
SMCO3-201ENST00000316048 APOMO95445 188 aa2.36□□□□□ -2.03
SMCO3-201ENST00000316048 LYRM7Q5U5X0 104 aa2.36□□□□□ -2.03
SMCO3-201ENST00000316048 SFTA2Q6UW10 78 aa2.36□□□□□ -2.03
SMCO3-201ENST00000316048 C10orf126Q8N4M7 172 aa2.36□□□□□ -2.03
SMCO3-201ENST00000316048 SPANXDQ9BXN6 97 aa2.36□□□□□ -2.03
SMCO3-201ENST00000316048 SPANXCQ9NY87 97 aa2.36□□□□□ -2.03
SMCO3-201ENST00000316048 PRO1854Q9UHT4 67 aa2.36□□□□□ -2.03
SMCO3-201ENST00000316048 GPR98Q8WXG9 6306 aa2.36□□□□□ -2.03
SMCO3-201ENST00000316048 HIVEP1P15822 2718 aa2.36□□□□□ -2.03
SMCO3-201ENST00000316048 MIAQ16674 131 aa2.36□□□□□ -2.03
SMCO3-201ENST00000316048 LELP1Q5T871 98 aa2.36□□□□□ -2.03
SMCO3-201ENST00000316048 COX7B2Q8TF08 81 aa2.36□□□□□ -2.03
SMCO3-201ENST00000316048 C11orf68Q9H3H3 251 aaKnown RBP2.36□□□□□ -2.03
SMCO3-201ENST00000316048 NSD1Q96L73 2696 aaPredicted RBP2.35□□□□□ -2.03
SMCO3-201ENST00000316048 A0A0B4J2C4 111 aa2.35□□□□□ -2.03
SMCO3-201ENST00000316048 F8W1H4 67 aa2.35□□□□□ -2.03
SMCO3-201ENST00000316048 ANGP03950 147 aaKnown RBP2.35□□□□□ -2.03
SMCO3-201ENST00000316048 SCGB1C2P0DMR2 95 aa2.35□□□□□ -2.03
SMCO3-201ENST00000316048 PSMB2P49721 201 aa2.35□□□□□ -2.03
SMCO3-201ENST00000316048 DEFB121Q5J5C9 76 aa2.35□□□□□ -2.03
SMCO3-201ENST00000316048 MEIG1Q5JSS6 88 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms