RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 C22orf24Q9Y442 160 aa8.81□□□□□ -1
SH3PXD2A-201ENST00000315994 PRR15LQ9BU68 103 aa8.81□□□□□ -1
SH3PXD2A-201ENST00000315994 EPG5Q9HCE0 2579 aa8.81□□□□□ -1
SH3PXD2A-201ENST00000315994 C6orf48Q9UBA6 75 aa8.81□□□□□ -1
SH3PXD2A-201ENST00000315994 FASNP49327 2511 aaKnown RBP8.8□□□□□ -1
SH3PXD2A-201ENST00000315994 Q9BRP9 147 aa8.8□□□□□ -1
SH3PXD2A-201ENST00000315994 TRAV7A0A075B6U4 112 aa8.79□□□□□ -1
SH3PXD2A-201ENST00000315994 FAM19A3Q7Z5A8 133 aa8.79□□□□□ -1
SH3PXD2A-201ENST00000315994 C4orf26Q17RF5 130 aa8.78□□□□□ -1
SH3PXD2A-201ENST00000315994 C5orf42Q9H799 3197 aa8.78□□□□□ -1
SH3PXD2A-201ENST00000315994 Q6ZVQ6 151 aa8.78□□□□□ -1
SH3PXD2A-201ENST00000315994 KRTAP10-3P60369 221 aa8.78□□□□□ -1
SH3PXD2A-201ENST00000315994 Q8N9L7 120 aa8.77□□□□□ -1
SH3PXD2A-201ENST00000315994 Q8N3U1 123 aa8.77□□□□□ -1.01
SH3PXD2A-201ENST00000315994 LINC00588Q9Y4M8 146 aa8.76□□□□□ -1.01
SH3PXD2A-201ENST00000315994 ACANP16112 2415 aa8.76□□□□□ -1.01
SH3PXD2A-201ENST00000315994 C16orf90A8MZG2 172 aa8.76□□□□□ -1.01
SH3PXD2A-201ENST00000315994 PRLHP81277 87 aa8.75□□□□□ -1.01
SH3PXD2A-201ENST00000315994 C19orf73Q9NVV2 129 aa8.75□□□□□ -1.01
SH3PXD2A-201ENST00000315994 KRTAP1-1Q07627 177 aa8.74□□□□□ -1.01
SH3PXD2A-201ENST00000315994 KRTAP10-11P60412 298 aa8.74□□□□□ -1.01
SH3PXD2A-201ENST00000315994 SOSTDC1Q6X4U4 206 aa8.74□□□□□ -1.01
SH3PXD2A-201ENST00000315994 IGHV6-1A0A0B4J1U7 121 aa8.73□□□□□ -1.01
SH3PXD2A-201ENST00000315994 PCNTO95613 3336 aa8.73□□□□□ -1.01
SH3PXD2A-201ENST00000315994 NBDYA0A0U1RRE5 68 aa8.73□□□□□ -1.01
SH3PXD2A-201ENST00000315994 SMCR5Q8TEV8 140 aa8.73□□□□□ -1.01
SH3PXD2A-201ENST00000315994 LINC00167Q96N53 147 aa8.73□□□□□ -1.01
SH3PXD2A-201ENST00000315994 TRBV7-6A0A0J9YX20 115 aa8.72□□□□□ -1.01
SH3PXD2A-201ENST00000315994 DNAH10OSP0CZ25 163 aa8.72□□□□□ -1.01
SH3PXD2A-201ENST00000315994 GVQW2A0A096LPI5 108 aaPredicted RBP8.72□□□□□ -1.01
SH3PXD2A-201ENST00000315994 GIG44P09565 113 aaPredicted RBP8.71□□□□□ -1.01
SH3PXD2A-201ENST00000315994 FAM30AQ9NZY2 134 aa8.71□□□□□ -1.02
SH3PXD2A-201ENST00000315994 J3QL48 77 aa8.71□□□□□ -1.02
SH3PXD2A-201ENST00000315994 PLA2G1BP04054 148 aaKnown RBP8.71□□□□□ -1.02
SH3PXD2A-201ENST00000315994 SPATA3Q8NHX4 192 aa8.7□□□□□ -1.02
SH3PXD2A-201ENST00000315994 TRANK1O15050 2925 aa8.7□□□□□ -1.02
SH3PXD2A-201ENST00000315994 A0A087WSZ3 146 aa8.7□□□□□ -1.02
SH3PXD2A-201ENST00000315994 MUC4Q99102 2169 aa8.7□□□□□ -1.02
SH3PXD2A-201ENST00000315994 LINC00846Q9NV44 126 aa8.69□□□□□ -1.02
SH3PXD2A-201ENST00000315994 K7EIL1 84 aa8.69□□□□□ -1.02
SH3PXD2A-201ENST00000315994 RTL8CO15255 209 aa8.69□□□□□ -1.02
SH3PXD2A-201ENST00000315994 ELOF1P60002 83 aaKnown RBP8.68□□□□□ -1.02
SH3PXD2A-201ENST00000315994 LINC00612Q8N6U2 182 aa8.68□□□□□ -1.02
SH3PXD2A-201ENST00000315994 BPTFQ12830 3046 aa8.67□□□□□ -1.02
SH3PXD2A-201ENST00000315994 KIAA0087Q14695 138 aa8.67□□□□□ -1.02
SH3PXD2A-201ENST00000315994 PRRC2CQ9Y520 2896 aaKnown RBP8.67□□□□□ -1.02
SH3PXD2A-201ENST00000315994 LITAFQ99732 161 aa8.66□□□□□ -1.02
SH3PXD2A-201ENST00000315994 PMAIP1Q13794 54 aa8.65□□□□□ -1.02
SH3PXD2A-201ENST00000315994 FAM218AQ96MZ4 157 aa8.65□□□□□ -1.02
SH3PXD2A-201ENST00000315994 F8P00451 2351 aa8.65□□□□□ -1.03
SH3PXD2A-201ENST00000315994 RETNLBQ9BQ08 111 aa8.64□□□□□ -1.03
SH3PXD2A-201ENST00000315994 RANBP2P49792 3224 aaKnown RBP8.64□□□□□ -1.03
SH3PXD2A-201ENST00000315994 Q6ZRP5 223 aa8.64□□□□□ -1.03
SH3PXD2A-201ENST00000315994 LINC01547P58512 204 aaPredicted RBP8.63□□□□□ -1.03
SH3PXD2A-201ENST00000315994 Q6ZRX8 168 aa8.63□□□□□ -1.03
SH3PXD2A-201ENST00000315994 CXCL6P80162 114 aa8.62□□□□□ -1.03
SH3PXD2A-201ENST00000315994 PHF5AQ7RTV0 110 aaKnown RBP8.62□□□□□ -1.03
SH3PXD2A-201ENST00000315994 PRR34Q9NV39 138 aa8.61□□□□□ -1.03
SH3PXD2A-201ENST00000315994 A6NED7 52 aa8.61□□□□□ -1.03
SH3PXD2A-201ENST00000315994 SPACA4Q8TDM5 124 aa8.6□□□□□ -1.03
SH3PXD2A-201ENST00000315994 DEFB116Q30KQ4 102 aa8.59□□□□□ -1.03
SH3PXD2A-201ENST00000315994 PRR4Q16378 134 aa8.59□□□□□ -1.03
SH3PXD2A-201ENST00000315994 TM2D3Q9BRN9 247 aa8.59□□□□□ -1.03
SH3PXD2A-201ENST00000315994 A0A1B0GW54 56 aa8.59□□□□□ -1.03
SH3PXD2A-201ENST00000315994 VPREB1P12018 145 aa8.58□□□□□ -1.04
SH3PXD2A-201ENST00000315994 LINC00208Q96KT6 92 aa8.58□□□□□ -1.04
SH3PXD2A-201ENST00000315994 HCG22E2RYF7 251 aa8.58□□□□□ -1.04
SH3PXD2A-201ENST00000315994 TMEM254Q8TBM7 123 aa8.58□□□□□ -1.04
SH3PXD2A-201ENST00000315994 IGLV6-57P01721 117 aa8.58□□□□□ -1.04
SH3PXD2A-201ENST00000315994 TYMSOSQ8TAI1 123 aa8.58□□□□□ -1.04
SH3PXD2A-201ENST00000315994 RPL37AP61513 92 aaKnown RBP8.57□□□□□ -1.04
SH3PXD2A-201ENST00000315994 MOBPQ13875 183 aa8.57□□□□□ -1.04
SH3PXD2A-201ENST00000315994 BCE1O60756 84 aa8.56□□□□□ -1.04
SH3PXD2A-201ENST00000315994 HECTD1Q9ULT8 2610 aa8.56□□□□□ -1.04
SH3PXD2A-201ENST00000315994 EPM2AB3EWF7 344 aa8.56□□□□□ -1.04
SH3PXD2A-201ENST00000315994 PSPHP1O15172 72 aa8.56□□□□□ -1.04
SH3PXD2A-201ENST00000315994 MKI67P46013 3256 aaKnown RBP8.55□□□□□ -1.04
SH3PXD2A-201ENST00000315994 LOC110117498A0A087WWA1 95 aa8.55□□□□□ -1.04
SH3PXD2A-201ENST00000315994 Q6ZQT0 140 aa8.54□□□□□ -1.04
SH3PXD2A-201ENST00000315994 CHTF8P0CG12 524 aa8.53□□□□□ -1.04
SH3PXD2A-201ENST00000315994 WIPF1O43516 503 aa8.53□□□□□ -1.04
SH3PXD2A-201ENST00000315994 C15orf56Q8N910 161 aa8.53□□□□□ -1.04
SH3PXD2A-201ENST00000315994 LAMA3Q16787 3333 aa8.53□□□□□ -1.04
SH3PXD2A-201ENST00000315994 LINC00476Q8WZB0 136 aa8.52□□□□□ -1.05
SH3PXD2A-201ENST00000315994 Q8NBF4 154 aa8.52□□□□□ -1.05
SH3PXD2A-201ENST00000315994 FAM168BA1KXE4 195 aa8.52□□□□□ -1.05
SH3PXD2A-201ENST00000315994 H0Y9P7 68 aa8.52□□□□□ -1.05
SH3PXD2A-201ENST00000315994 SERTAD4-AS1Q5TG53 156 aa8.51□□□□□ -1.05
SH3PXD2A-201ENST00000315994 ST20-AS1Q8NBB2 130 aa8.51□□□□□ -1.05
SH3PXD2A-201ENST00000315994 IGLV1-50A0A075B6I6 118 aa8.5□□□□□ -1.05
SH3PXD2A-201ENST00000315994 SPINK1P00995 79 aa8.5□□□□□ -1.05
SH3PXD2A-201ENST00000315994 KCNQ1DNQ9H478 68 aa8.5□□□□□ -1.05
SH3PXD2A-201ENST00000315994 LINC00336Q6ZUF6 198 aa8.49□□□□□ -1.05
SH3PXD2A-201ENST00000315994 IGKV2D-30A0A075B6S6 120 aa8.48□□□□□ -1.05
SH3PXD2A-201ENST00000315994 IGKV2-30P06310 120 aa8.48□□□□□ -1.05
SH3PXD2A-201ENST00000315994 ZNF575Q86XF7 245 aa8.47□□□□□ -1.05
SH3PXD2A-201ENST00000315994 PCOTHQ58A44 107 aa8.47□□□□□ -1.05
SH3PXD2A-201ENST00000315994 SMIM29Q86T20 159 aa8.46□□□□□ -1.05
SH3PXD2A-201ENST00000315994 hDV103S1A0JD37 113 aa8.46□□□□□ -1.05
SH3PXD2A-201ENST00000315994 EIF4EBP3O60516 100 aaPredicted RBP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms