RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 SMIM26A0A096LP01 95 aa4.19□□□□□ -1.74
PRKDC-201ENST00000314191 CCDC179H3BU77 68 aa4.19□□□□□ -1.74
PRKDC-201ENST00000314191 Q6Q795 121 aa4.19□□□□□ -1.74
PRKDC-201ENST00000314191 CHD8Q9HCK8 2581 aa4.19□□□□□ -1.74
PRKDC-201ENST00000314191 LY6G6CO95867 125 aa4.19□□□□□ -1.74
PRKDC-201ENST00000314191 SERP2Q8N6R1 65 aa4.18□□□□□ -1.74
PRKDC-201ENST00000314191 LINC00846Q9NV44 126 aa4.18□□□□□ -1.74
PRKDC-201ENST00000314191 PMAIP1Q13794 54 aa4.18□□□□□ -1.74
PRKDC-201ENST00000314191 C7orf33Q8WU49 177 aa4.18□□□□□ -1.74
PRKDC-201ENST00000314191 Q6JHZ5 121 aa4.18□□□□□ -1.74
PRKDC-201ENST00000314191 DNAH14Q0VDD8 3507 aa4.18□□□□□ -1.74
PRKDC-201ENST00000314191 NDUFS5O43920 106 aa4.18□□□□□ -1.74
PRKDC-201ENST00000314191 C22orf24Q9Y442 160 aa4.18□□□□□ -1.74
PRKDC-201ENST00000314191 LINC00588Q9Y4M8 146 aa4.18□□□□□ -1.74
PRKDC-201ENST00000314191 SERP1Q9Y6X1 66 aa4.18□□□□□ -1.74
PRKDC-201ENST00000314191 PRO0628Q9UI54 55 aa4.17□□□□□ -1.74
PRKDC-201ENST00000314191 DMBT1Q9UGM3 2413 aaPredicted RBP4.17□□□□□ -1.74
PRKDC-201ENST00000314191 MPLKIPQ8TAP9 179 aa4.16□□□□□ -1.74
PRKDC-201ENST00000314191 H0Y9J4 135 aa4.16□□□□□ -1.74
PRKDC-201ENST00000314191 LRCOL1A6NCL2 159 aa4.16□□□□□ -1.74
PRKDC-201ENST00000314191 NUPR2A6NF83 97 aa4.16□□□□□ -1.74
PRKDC-201ENST00000314191 LINC00167Q96N53 147 aa4.16□□□□□ -1.74
PRKDC-201ENST00000314191 REG3GQ6UW15 175 aa4.16□□□□□ -1.74
PRKDC-201ENST00000314191 COX7CP15954 63 aa4.16□□□□□ -1.74
PRKDC-201ENST00000314191 A6NED7 52 aa4.15□□□□□ -1.74
PRKDC-201ENST00000314191 F8WDY8 70 aa4.15□□□□□ -1.75
PRKDC-201ENST00000314191 C1orf137Q5JT78 98 aa4.15□□□□□ -1.75
PRKDC-201ENST00000314191 Q6ZRP5 223 aa4.15□□□□□ -1.75
PRKDC-201ENST00000314191 PRR34Q9NV39 138 aa4.15□□□□□ -1.75
PRKDC-201ENST00000314191 K7EIL1 84 aa4.14□□□□□ -1.75
PRKDC-201ENST00000314191 MDFIQ99750 246 aa4.14□□□□□ -1.75
PRKDC-201ENST00000314191 HRCT1Q6UXD1 115 aa4.14□□□□□ -1.75
PRKDC-201ENST00000314191 ELOF1P60002 83 aaKnown RBP4.13□□□□□ -1.75
PRKDC-201ENST00000314191 PRLHP81277 87 aa4.13□□□□□ -1.75
PRKDC-201ENST00000314191 SNURFQ9Y675 71 aa4.13□□□□□ -1.75
PRKDC-201ENST00000314191 IGLV9-49A0A0B4J1Y8 123 aa4.13□□□□□ -1.75
PRKDC-201ENST00000314191 PRUNE2Q8WUY3 3088 aa4.13□□□□□ -1.75
PRKDC-201ENST00000314191 LAMA2P24043 3122 aaKnown RBP4.13□□□□□ -1.75
PRKDC-201ENST00000314191 SPEGQ15772 3267 aa4.13□□□□□ -1.75
PRKDC-201ENST00000314191 GVQW2A0A096LPI5 108 aaPredicted RBP4.13□□□□□ -1.75
PRKDC-201ENST00000314191 WFDC13Q8IUB5 93 aa4.13□□□□□ -1.75
PRKDC-201ENST00000314191 SERTAD4-AS1Q5TG53 156 aa4.13□□□□□ -1.75
PRKDC-201ENST00000314191 Q6ZVQ6 151 aa4.12□□□□□ -1.75
PRKDC-201ENST00000314191 SMCR5Q8TEV8 140 aa4.12□□□□□ -1.75
PRKDC-201ENST00000314191 LINC00474Q9P2X8 69 aa4.12□□□□□ -1.75
PRKDC-201ENST00000314191 A0A087WSZ3 146 aa4.12□□□□□ -1.75
PRKDC-201ENST00000314191 DEFB116Q30KQ4 102 aa4.12□□□□□ -1.75
PRKDC-201ENST00000314191 CELSR3Q9NYQ7 3312 aa4.12□□□□□ -1.75
PRKDC-201ENST00000314191 Q8N9L7 120 aa4.11□□□□□ -1.75
PRKDC-201ENST00000314191 USP34Q70CQ2 3546 aa4.11□□□□□ -1.75
PRKDC-201ENST00000314191 RPS28P62857 69 aaKnown RBP4.11□□□□□ -1.75
PRKDC-201ENST00000314191 CASC2Q6XLA1 102 aa4.11□□□□□ -1.75
PRKDC-201ENST00000314191 TRANK1O15050 2925 aa4.11□□□□□ -1.75
PRKDC-201ENST00000314191 NHLRC4P0CG21 123 aaPredicted RBP4.11□□□□□ -1.75
PRKDC-201ENST00000314191 ST20-AS1Q8NBB2 130 aa4.11□□□□□ -1.75
PRKDC-201ENST00000314191 PRYO14603 147 aa4.11□□□□□ -1.75
PRKDC-201ENST00000314191 SPINK6Q6UWN8 80 aa4.11□□□□□ -1.75
PRKDC-201ENST00000314191 LINC01547P58512 204 aaPredicted RBP4.11□□□□□ -1.75
PRKDC-201ENST00000314191 CASC10Q5T4H9 136 aa4.11□□□□□ -1.75
PRKDC-201ENST00000314191 C15orf56Q8N910 161 aa4.11□□□□□ -1.75
PRKDC-201ENST00000314191 TRBV7-7A0A0K0K1E9 115 aa4.1□□□□□ -1.75
PRKDC-201ENST00000314191 PHF5AQ7RTV0 110 aaKnown RBP4.1□□□□□ -1.75
PRKDC-201ENST00000314191 IGLV6-57P01721 117 aa4.1□□□□□ -1.75
PRKDC-201ENST00000314191 Q9BRP9 147 aa4.1□□□□□ -1.75
PRKDC-201ENST00000314191 C1orf134Q5TEV5 83 aa4.1□□□□□ -1.75
PRKDC-201ENST00000314191 FAM168BA1KXE4 195 aa4.1□□□□□ -1.75
PRKDC-201ENST00000314191 DNAH10OSP0CZ25 163 aa4.1□□□□□ -1.75
PRKDC-201ENST00000314191 FAM30AQ9NZY2 134 aa4.09□□□□□ -1.75
PRKDC-201ENST00000314191 C9orf129Q5T035 196 aaKnown RBP4.09□□□□□ -1.75
PRKDC-201ENST00000314191 TM2D3Q9BRN9 247 aa4.08□□□□□ -1.76
PRKDC-201ENST00000314191 ZNF706Q9Y5V0 76 aaPredicted RBP4.08□□□□□ -1.76
PRKDC-201ENST00000314191 TRAV7A0A075B6U4 112 aa4.08□□□□□ -1.76
PRKDC-201ENST00000314191 CHTF8P0CG12 524 aa4.08□□□□□ -1.76
PRKDC-201ENST00000314191 EYSQ5T1H1 3165 aa4.08□□□□□ -1.76
PRKDC-201ENST00000314191 WDFY4Q6ZS81 3184 aa4.08□□□□□ -1.76
PRKDC-201ENST00000314191 Q6ZQT0 140 aa4.08□□□□□ -1.76
PRKDC-201ENST00000314191 NBDYA0A0U1RRE5 68 aa4.08□□□□□ -1.76
PRKDC-201ENST00000314191 CXCL6P80162 114 aa4.08□□□□□ -1.76
PRKDC-201ENST00000314191 IGLV5-52A0A0A0MRZ9 124 aa4.08□□□□□ -1.76
PRKDC-201ENST00000314191 PRR4Q16378 134 aa4.07□□□□□ -1.76
PRKDC-201ENST00000314191 Q6ZRX8 168 aa4.07□□□□□ -1.76
PRKDC-201ENST00000314191 IGLV1-50A0A075B6I6 118 aa4.07□□□□□ -1.76
PRKDC-201ENST00000314191 A0A0C4DFX4 3053 aa4.06□□□□□ -1.76
PRKDC-201ENST00000314191 LINC00528Q8N1L1 170 aa4.06□□□□□ -1.76
PRKDC-201ENST00000314191 C16orf90A8MZG2 172 aa4.06□□□□□ -1.76
PRKDC-201ENST00000314191 HECTD1Q9ULT8 2610 aa4.05□□□□□ -1.76
PRKDC-201ENST00000314191 WIPF1O43516 503 aa4.05□□□□□ -1.76
PRKDC-201ENST00000314191 IGKV4-1P06312 121 aa4.05□□□□□ -1.76
PRKDC-201ENST00000314191 TRBV7-6A0A0J9YX20 115 aa4.05□□□□□ -1.76
PRKDC-201ENST00000314191 Q8NDZ9 215 aa4.05□□□□□ -1.76
PRKDC-201ENST00000314191 LINC00476Q8WZB0 136 aa4.05□□□□□ -1.76
PRKDC-201ENST00000314191 LIMD2Q9BT23 127 aa4.05□□□□□ -1.76
PRKDC-201ENST00000314191 MYO15AQ9UKN7 3530 aa4.04□□□□□ -1.76
PRKDC-201ENST00000314191 LOC110117498A0A087WWA1 95 aa4.04□□□□□ -1.76
PRKDC-201ENST00000314191 KCNQ1DNQ9H478 68 aa4.04□□□□□ -1.76
PRKDC-201ENST00000314191 CENPEQ02224 2701 aa4.04□□□□□ -1.76
PRKDC-201ENST00000314191 LINC00208Q96KT6 92 aa4.04□□□□□ -1.76
PRKDC-201ENST00000314191 CIRBP-AS1Q8TBR5 109 aa4.03□□□□□ -1.76
PRKDC-201ENST00000314191 EPM2AB3EWF7 344 aa4.03□□□□□ -1.76
PRKDC-201ENST00000314191 RTL8CO15255 209 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms