RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 TRAV7A0A075B6U4 112 aa10.03□□□□□ -0.8
COL6A2-202ENST00000310645 ZNF561-AS1K7EIQ3 104 aa10.03□□□□□ -0.8
COL6A2-202ENST00000310645 ITPR3Q14573 2671 aa10.03□□□□□ -0.8
COL6A2-202ENST00000310645 FLNAP21333 2647 aaKnown RBP10.03□□□□□ -0.8
COL6A2-202ENST00000310645 C19orf73Q9NVV2 129 aa10.03□□□□□ -0.8
COL6A2-202ENST00000310645 A0A1B0GUV1 79 aa10.03□□□□□ -0.8
COL6A2-202ENST00000310645 CD164L2Q6UWJ8 174 aa10.03□□□□□ -0.8
COL6A2-202ENST00000310645 F8WEM9 126 aa10.01□□□□□ -0.81
COL6A2-202ENST00000310645 REG3AQ06141 175 aa10.01□□□□□ -0.81
COL6A2-202ENST00000310645 WIPF1O43516 503 aa10.01□□□□□ -0.81
COL6A2-202ENST00000310645 CMC4P56277 68 aaPredicted RBP10.01□□□□□ -0.81
COL6A2-202ENST00000310645 COX17Q14061 63 aa10.01□□□□□ -0.81
COL6A2-202ENST00000310645 ZNF469Q96JG9 3925 aaPredicted RBP10□□□□□ -0.81
COL6A2-202ENST00000310645 XAGE1AQ9HD64 81 aa10□□□□□ -0.81
COL6A2-202ENST00000310645 PRO0255Q9UI72 69 aa10□□□□□ -0.81
COL6A2-202ENST00000310645 SERP1Q9Y6X1 66 aa9.99□□□□□ -0.81
COL6A2-202ENST00000310645 IGLV1-51P01701 117 aa9.98□□□□□ -0.81
COL6A2-202ENST00000310645 SPAG11BQ08648 103 aa9.98□□□□□ -0.81
COL6A2-202ENST00000310645 LINC00482Q8N8I6 264 aa9.98□□□□□ -0.81
COL6A2-202ENST00000310645 FASNP49327 2511 aaKnown RBP9.98□□□□□ -0.81
COL6A2-202ENST00000310645 TM2D3Q9BRN9 247 aa9.98□□□□□ -0.81
COL6A2-202ENST00000310645 LOC110117498A0A087WWA1 95 aa9.97□□□□□ -0.81
COL6A2-202ENST00000310645 LINC00336Q6ZUF6 198 aa9.97□□□□□ -0.81
COL6A2-202ENST00000310645 CYSRT1A8MQ03 144 aa9.96□□□□□ -0.81
COL6A2-202ENST00000310645 DEFB113Q30KQ7 82 aa9.96□□□□□ -0.82
COL6A2-202ENST00000310645 MUC7Q8TAX7 377 aa9.96□□□□□ -0.82
COL6A2-202ENST00000310645 HTN3P15516 51 aa9.95□□□□□ -0.82
COL6A2-202ENST00000310645 IGHV4-28A0A0C4DH34 117 aa9.94□□□□□ -0.82
COL6A2-202ENST00000310645 Q8N9L7 120 aa9.94□□□□□ -0.82
COL6A2-202ENST00000310645 KLKP1Q107X0 134 aa9.94□□□□□ -0.82
COL6A2-202ENST00000310645 LINC00474Q9P2X8 69 aa9.93□□□□□ -0.82
COL6A2-202ENST00000310645 DIRC1Q969H9 104 aa9.92□□□□□ -0.82
COL6A2-202ENST00000310645 KLK12Q9UKR0 248 aa9.92□□□□□ -0.82
COL6A2-202ENST00000310645 IGLV6-57P01721 117 aa9.91□□□□□ -0.82
COL6A2-202ENST00000310645 HECTD1Q9ULT8 2610 aa9.91□□□□□ -0.82
COL6A2-202ENST00000310645 C1orf43Q9BWL3 253 aa9.91□□□□□ -0.82
COL6A2-202ENST00000310645 CXCL6P80162 114 aa9.9□□□□□ -0.82
COL6A2-202ENST00000310645 X6R8D5 127 aa9.9□□□□□ -0.82
COL6A2-202ENST00000310645 PDE6GP18545 87 aa9.89□□□□□ -0.83
COL6A2-202ENST00000310645 FP248Q71RG6 208 aaPredicted RBP9.89□□□□□ -0.83
COL6A2-202ENST00000310645 DEFB135Q30KP9 77 aa9.89□□□□□ -0.83
COL6A2-202ENST00000310645 SMIM26A0A096LP01 95 aa9.89□□□□□ -0.83
COL6A2-202ENST00000310645 TRBV7-6A0A0J9YX20 115 aa9.89□□□□□ -0.83
COL6A2-202ENST00000310645 BCE1O60756 84 aa9.89□□□□□ -0.83
COL6A2-202ENST00000310645 MIFP14174 115 aa9.89□□□□□ -0.83
COL6A2-202ENST00000310645 NREPQ16612 68 aa9.89□□□□□ -0.83
COL6A2-202ENST00000310645 ZNF73O43830 326 aaPredicted RBP9.88□□□□□ -0.83
COL6A2-202ENST00000310645 COX7BP24311 80 aa9.88□□□□□ -0.83
COL6A2-202ENST00000310645 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.88□□□□□ -0.83
COL6A2-202ENST00000310645 LINC00612Q8N6U2 182 aa9.88□□□□□ -0.83
COL6A2-202ENST00000310645 PKIGQ9Y2B9 76 aa9.88□□□□□ -0.83
COL6A2-202ENST00000310645 BPY2O14599 106 aa9.87□□□□□ -0.83
COL6A2-202ENST00000310645 DAD1P61803 113 aa9.87□□□□□ -0.83
COL6A2-202ENST00000310645 HELZ2Q9BYK8 2649 aaKnown RBP9.87□□□□□ -0.83
COL6A2-202ENST00000310645 EPM2AB3EWF7 344 aa9.86□□□□□ -0.83
COL6A2-202ENST00000310645 C9orf66Q5T8R8 295 aa9.86□□□□□ -0.83
COL6A2-202ENST00000310645 MRAPQ8TCY5 172 aa9.86□□□□□ -0.83
COL6A2-202ENST00000310645 HIGD2BQ4VC39 106 aa9.86□□□□□ -0.83
COL6A2-202ENST00000310645 PRO0628Q9UI54 55 aa9.86□□□□□ -0.83
COL6A2-202ENST00000310645 TRBV7-4A0A0J9YYF1 115 aa9.85□□□□□ -0.83
COL6A2-202ENST00000310645 MPLKIPQ8TAP9 179 aa9.85□□□□□ -0.83
COL6A2-202ENST00000310645 TMEM254Q8TBM7 123 aa9.85□□□□□ -0.83
COL6A2-202ENST00000310645 C6orf48Q9UBA6 75 aa9.85□□□□□ -0.83
COL6A2-202ENST00000310645 A0A0J9YWU9 116 aa9.84□□□□□ -0.83
COL6A2-202ENST00000310645 IGHV4-30-4P0DP06 118 aa9.84□□□□□ -0.83
COL6A2-202ENST00000310645 C3orf84H3BNL1 204 aa9.83□□□□□ -0.84
COL6A2-202ENST00000310645 BRK1Q8WUW1 75 aa9.83□□□□□ -0.84
COL6A2-202ENST00000310645 C16orf95Q9H693 158 aa9.83□□□□□ -0.84
COL6A2-202ENST00000310645 VWFP04275 2813 aa9.82□□□□□ -0.84
COL6A2-202ENST00000310645 KRTAP1-3Q8IUG1 177 aa9.82□□□□□ -0.84
COL6A2-202ENST00000310645 DEFB105AQ8NG35 78 aa9.82□□□□□ -0.84
COL6A2-202ENST00000310645 CELA1Q9UNI1 258 aa9.82□□□□□ -0.84
COL6A2-202ENST00000310645 A0A0U1RQV1 116 aa9.81□□□□□ -0.84
COL6A2-202ENST00000310645 UNC79Q9P2D8 2635 aa9.81□□□□□ -0.84
COL6A2-202ENST00000310645 NDUFC1O43677 76 aa9.81□□□□□ -0.84
COL6A2-202ENST00000310645 LYRM9A8MSI8 78 aa9.8□□□□□ -0.84
COL6A2-202ENST00000310645 CAMK2N2Q96S95 79 aa9.8□□□□□ -0.84
COL6A2-202ENST00000310645 ELOF1P60002 83 aaKnown RBP9.79□□□□□ -0.84
COL6A2-202ENST00000310645 ITPR2Q14571 2701 aa9.79□□□□□ -0.84
COL6A2-202ENST00000310645 FAM229BQ4G0N7 80 aa9.79□□□□□ -0.84
COL6A2-202ENST00000310645 H3BQ85 93 aa9.79□□□□□ -0.84
COL6A2-202ENST00000310645 LELP1Q5T871 98 aa9.76□□□□□ -0.85
COL6A2-202ENST00000310645 HIGD2AQ9BW72 106 aa9.76□□□□□ -0.85
COL6A2-202ENST00000310645 FLNBO75369 2602 aaKnown RBP9.76□□□□□ -0.85
COL6A2-202ENST00000310645 IGKV4-1P06312 121 aa9.76□□□□□ -0.85
COL6A2-202ENST00000310645 PRYO14603 147 aa9.75□□□□□ -0.85
COL6A2-202ENST00000310645 VPREB1P12018 145 aa9.75□□□□□ -0.85
COL6A2-202ENST00000310645 F8P00451 2351 aa9.75□□□□□ -0.85
COL6A2-202ENST00000310645 FUSP35637 526 aaKnown RBP eCLIP9.75□□□□□ -0.85
COL6A2-202ENST00000310645 LRCOL1A6NCL2 159 aa9.73□□□□□ -0.85
COL6A2-202ENST00000310645 Q6ZRU5 148 aa9.73□□□□□ -0.85
COL6A2-202ENST00000310645 FAM30AQ9NZY2 134 aa9.73□□□□□ -0.85
COL6A2-202ENST00000310645 M0R378 163 aa9.73□□□□□ -0.85
COL6A2-202ENST00000310645 ATP5EP56381 51 aaPredicted RBP9.73□□□□□ -0.85
COL6A2-202ENST00000310645 PRR34Q9NV39 138 aa9.73□□□□□ -0.85
COL6A2-202ENST00000310645 GVQW2A0A096LPI5 108 aaPredicted RBP9.72□□□□□ -0.85
COL6A2-202ENST00000310645 UBR5O95071 2799 aaPredicted RBP9.72□□□□□ -0.85
COL6A2-202ENST00000310645 KRTAP10-3P60369 221 aa9.72□□□□□ -0.85
COL6A2-202ENST00000310645 LINC00528Q8N1L1 170 aa9.72□□□□□ -0.85
COL6A2-202ENST00000310645 OCR1Q9BZK8 76 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms