RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 TSPAN13O95857 204 aa14.63□□□□□ -0.07
IRF3-201ENST00000309877 ALMS1Q8TCU4 4167 aa14.63□□□□□ -0.07
IRF3-201ENST00000309877 TRAV13-2A0A0B4J235 113 aa14.62□□□□□ -0.07
IRF3-201ENST00000309877 NDUFC2O95298 119 aa14.62□□□□□ -0.07
IRF3-201ENST00000309877 RPL13AP40429 203 aaKnown RBP14.62□□□□□ -0.07
IRF3-201ENST00000309877 Q1RN00 199 aa14.62□□□□□ -0.07
IRF3-201ENST00000309877 IGKV2-28A0A075B6P5 120 aa14.61□□□□□ -0.07
IRF3-201ENST00000309877 IGKV2D-28P01615 120 aa14.61□□□□□ -0.07
IRF3-201ENST00000309877 A0A087WTM6 91 aa14.61□□□□□ -0.07
IRF3-201ENST00000309877 LOC107984640A0A0U1RRK4 108 aa14.6□□□□□ -0.07
IRF3-201ENST00000309877 Q8N814 137 aa14.6□□□□□ -0.07
IRF3-201ENST00000309877 PRR3P79522 188 aaKnown RBP14.58□□□□□ -0.07
IRF3-201ENST00000309877 LINC00337Q8N6G1 96 aa14.58□□□□□ -0.07
IRF3-201ENST00000309877 A0A1W2PPM0 123 aa14.58□□□□□ -0.08
IRF3-201ENST00000309877 KMT2AQ03164 3969 aa14.57□□□□□ -0.08
IRF3-201ENST00000309877 GAGE2BQ13066 116 aa14.57□□□□□ -0.08
IRF3-201ENST00000309877 VAMP3Q15836 100 aa14.57□□□□□ -0.08
IRF3-201ENST00000309877 Q8NDZ9 215 aa14.57□□□□□ -0.08
IRF3-201ENST00000309877 OR13C6PQ8NH95 151 aa14.57□□□□□ -0.08
IRF3-201ENST00000309877 FABP2P12104 132 aa14.56□□□□□ -0.08
IRF3-201ENST00000309877 PSMB2P49721 201 aa14.56□□□□□ -0.08
IRF3-201ENST00000309877 NCR3O14931 201 aa14.55□□□□□ -0.08
IRF3-201ENST00000309877 C9orf129Q5T035 196 aaKnown RBP14.55□□□□□ -0.08
IRF3-201ENST00000309877 DNAH6Q9C0G6 4158 aa14.54□□□□□ -0.08
IRF3-201ENST00000309877 C9orf163Q8N9P6 203 aa14.52□□□□□ -0.08
IRF3-201ENST00000309877 SCGB1C2P0DMR2 95 aa14.51□□□□□ -0.09
IRF3-201ENST00000309877 VPREB1P12018 145 aa14.51□□□□□ -0.09
IRF3-201ENST00000309877 PKIGQ9Y2B9 76 aa14.51□□□□□ -0.09
IRF3-201ENST00000309877 TRBV10-2A0A0K0K1G8 114 aa14.5□□□□□ -0.09
IRF3-201ENST00000309877 LCE6AA0A183 80 aa14.5□□□□□ -0.09
IRF3-201ENST00000309877 S100A7L2Q5SY68 101 aa14.5□□□□□ -0.09
IRF3-201ENST00000309877 LYRM7Q5U5X0 104 aa14.5□□□□□ -0.09
IRF3-201ENST00000309877 TMEM126AQ9H061 195 aa14.49□□□□□ -0.09
IRF3-201ENST00000309877 DNAH2Q9P225 4427 aa14.49□□□□□ -0.09
IRF3-201ENST00000309877 TRIAP1O43715 76 aa14.49□□□□□ -0.09
IRF3-201ENST00000309877 SPCS1Q9Y6A9 102 aa14.49□□□□□ -0.09
IRF3-201ENST00000309877 C16orf90A8MZG2 172 aa14.48□□□□□ -0.09
IRF3-201ENST00000309877 RTL8CO15255 209 aa14.48□□□□□ -0.09
IRF3-201ENST00000309877 TNP2Q05952 138 aa14.48□□□□□ -0.09
IRF3-201ENST00000309877 COX6CP09669 75 aa14.47□□□□□ -0.09
IRF3-201ENST00000309877 PLA2G2DQ9UNK4 145 aa14.47□□□□□ -0.09
IRF3-201ENST00000309877 A0A096LNI7 61 aa14.46□□□□□ -0.09
IRF3-201ENST00000309877 IGKV2-24A0A0C4DH68 120 aa14.46□□□□□ -0.09
IRF3-201ENST00000309877 GAGE10A6NGK3 116 aa14.46□□□□□ -0.09
IRF3-201ENST00000309877 M0R378 163 aa14.46□□□□□ -0.09
IRF3-201ENST00000309877 NKAPP1Q8N9T2 125 aa14.46□□□□□ -0.09
IRF3-201ENST00000309877 SMIM11BQ8TCY0 68 aa14.46□□□□□ -0.1
IRF3-201ENST00000309877 LINC01620Q4KN68 170 aa14.45□□□□□ -0.1
IRF3-201ENST00000309877 SERTAD4-AS1Q5TG53 156 aa14.45□□□□□ -0.1
IRF3-201ENST00000309877 GTF2H5Q6ZYL4 71 aa14.45□□□□□ -0.1
IRF3-201ENST00000309877 K7EP34 96 aa14.44□□□□□ -0.1
IRF3-201ENST00000309877 RPL28P46779 137 aaKnown RBP14.44□□□□□ -0.1
IRF3-201ENST00000309877 FAM168BA1KXE4 195 aa14.42□□□□□ -0.1
IRF3-201ENST00000309877 SDIM1Q6ZPB5 146 aa14.42□□□□□ -0.1
IRF3-201ENST00000309877 IGLV6-57P01721 117 aa14.42□□□□□ -0.1
IRF3-201ENST00000309877 IGLV5-52A0A0A0MRZ9 124 aa14.41□□□□□ -0.1
IRF3-201ENST00000309877 TRBV10-3A0A0K0K1G6 114 aa14.41□□□□□ -0.1
IRF3-201ENST00000309877 FUSP35637 526 aaKnown RBP eCLIP14.4□□□□□ -0.1
IRF3-201ENST00000309877 FAM19A5Q7Z5A7 132 aaPredicted RBP14.4□□□□□ -0.1
IRF3-201ENST00000309877 IGLV5-37A0A075B6J1 123 aa14.39□□□□□ -0.11
IRF3-201ENST00000309877 TRBV20-1A0A075B6N2 111 aa14.39□□□□□ -0.11
IRF3-201ENST00000309877 UBE2V1Q13404 147 aa14.39□□□□□ -0.11
IRF3-201ENST00000309877 LINC00474Q9P2X8 69 aa14.39□□□□□ -0.11
IRF3-201ENST00000309877 CHTF8P0CG12 524 aa14.38□□□□□ -0.11
IRF3-201ENST00000309877 DNAH17Q9UFH2 4485 aa14.38□□□□□ -0.11
IRF3-201ENST00000309877 HYDINQ4G0P3 5121 aa14.38□□□□□ -0.11
IRF3-201ENST00000309877 TCL1BO95988 128 aa14.37□□□□□ -0.11
IRF3-201ENST00000309877 C22orf24Q9Y442 160 aa14.37□□□□□ -0.11
IRF3-201ENST00000309877 C7orf33Q8WU49 177 aa14.36□□□□□ -0.11
IRF3-201ENST00000309877 KRTAP7-1Q8IUC3 87 aa14.36□□□□□ -0.11
IRF3-201ENST00000309877 CBY1Q9Y3M2 126 aa14.36□□□□□ -0.11
IRF3-201ENST00000309877 TRAV23DV6A0A075B6W5 121 aa14.35□□□□□ -0.11
IRF3-201ENST00000309877 CLEC2BQ92478 149 aa14.35□□□□□ -0.11
IRF3-201ENST00000309877 H3BMG7 143 aa14.34□□□□□ -0.11
IRF3-201ENST00000309877 ATXN8Q156A1 80 aa14.34□□□□□ -0.11
IRF3-201ENST00000309877 DPH3Q96FX2 82 aa14.34□□□□□ -0.11
IRF3-201ENST00000309877 SACSQ9NZJ4 4579 aa14.33□□□□□ -0.11
IRF3-201ENST00000309877 A0A1W2PNN7 141 aa14.33□□□□□ -0.11
IRF3-201ENST00000309877 H0YGX0 51 aa14.33□□□□□ -0.12
IRF3-201ENST00000309877 C6orf99Q4VX62 202 aa14.33□□□□□ -0.12
IRF3-201ENST00000309877 MRPL55Q7Z7F7 128 aaKnown RBP14.33□□□□□ -0.12
IRF3-201ENST00000309877 M0QXV9 152 aa14.31□□□□□ -0.12
IRF3-201ENST00000309877 LINC00167Q96N53 147 aa14.31□□□□□ -0.12
IRF3-201ENST00000309877 RPL37AP8A6NKH3 93 aa14.29□□□□□ -0.12
IRF3-201ENST00000309877 ZNF73O43830 326 aaPredicted RBP14.29□□□□□ -0.12
IRF3-201ENST00000309877 KRTAP10-2P60368 255 aa14.29□□□□□ -0.12
IRF3-201ENST00000309877 DIRC1Q969H9 104 aa14.29□□□□□ -0.12
IRF3-201ENST00000309877 PANO1I0J062 215 aa14.28□□□□□ -0.12
IRF3-201ENST00000309877 LST1O00453 97 aa14.28□□□□□ -0.12
IRF3-201ENST00000309877 SPACA4Q8TDM5 124 aa14.28□□□□□ -0.12
IRF3-201ENST00000309877 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.28□□□□□ -0.12
IRF3-201ENST00000309877 IGLV1-50A0A075B6I6 118 aa14.26□□□□□ -0.13
IRF3-201ENST00000309877 KCNQ1DNQ9H478 68 aa14.26□□□□□ -0.13
IRF3-201ENST00000309877 FRAS1Q86XX4 4008 aa14.26□□□□□ -0.13
IRF3-201ENST00000309877 LINC00336Q6ZUF6 198 aa14.26□□□□□ -0.13
IRF3-201ENST00000309877 FAM218AQ96MZ4 157 aa14.25□□□□□ -0.13
IRF3-201ENST00000309877 PRYO14603 147 aa14.23□□□□□ -0.13
IRF3-201ENST00000309877 A0A087WYN8 130 aa14.21□□□□□ -0.13
IRF3-201ENST00000309877 TRBV7-6A0A0J9YX20 115 aa14.21□□□□□ -0.13
IRF3-201ENST00000309877 C9JAW5 83 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms