RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 LINC01546A6NGU7 62 aa7.32□□□□□ -1.24
TPT1-201ENST00000309246 C3orf79P0CE67 100 aa7.32□□□□□ -1.24
TPT1-201ENST00000309246 G0S2P27469 103 aa7.32□□□□□ -1.24
TPT1-201ENST00000309246 C2orf82Q6UX34 121 aa7.32□□□□□ -1.24
TPT1-201ENST00000309246 C2orf66Q6UXQ4 117 aa7.32□□□□□ -1.24
TPT1-201ENST00000309246 CDIP1Q9H305 208 aa7.32□□□□□ -1.24
TPT1-201ENST00000309246 A0A096LNJ9 63 aa7.31□□□□□ -1.24
TPT1-201ENST00000309246 ATP5LO75964 103 aa7.31□□□□□ -1.24
TPT1-201ENST00000309246 UBE2D1P51668 147 aa7.31□□□□□ -1.24
TPT1-201ENST00000309246 C9orf129Q5T035 196 aaKnown RBP7.31□□□□□ -1.24
TPT1-201ENST00000309246 LINC00242Q5T6M2 205 aa7.31□□□□□ -1.24
TPT1-201ENST00000309246 Q6ZN92 141 aa7.31□□□□□ -1.24
TPT1-201ENST00000309246 IFI27L1Q96BM0 104 aa7.31□□□□□ -1.24
TPT1-201ENST00000309246 PAM16Q9Y3D7 125 aa7.31□□□□□ -1.24
TPT1-201ENST00000309246 IGLV4-3A0A075B6K6 122 aa7.3□□□□□ -1.24
TPT1-201ENST00000309246 TRBV30A0A0K0K1B3 111 aa7.3□□□□□ -1.24
TPT1-201ENST00000309246 NDUFC2-KCTD14E9PQ53 114 aa7.3□□□□□ -1.24
TPT1-201ENST00000309246 SPATA45Q537H7 98 aa7.3□□□□□ -1.24
TPT1-201ENST00000309246 TOMM6Q96B49 74 aa7.3□□□□□ -1.24
TPT1-201ENST00000309246 SYS1-DBNDD2H3BUS1 97 aa7.29□□□□□ -1.24
TPT1-201ENST00000309246 IGLC3P0DOY3 106 aa7.29□□□□□ -1.24
TPT1-201ENST00000309246 PRR4Q16378 134 aa7.29□□□□□ -1.24
TPT1-201ENST00000309246 TMEM141Q96I45 108 aa7.29□□□□□ -1.24
TPT1-201ENST00000309246 PYGO1Q9Y3Y4 419 aa7.29□□□□□ -1.24
TPT1-201ENST00000309246 COL5A1-AS1Q5SY13 56 aa7.28□□□□□ -1.24
TPT1-201ENST00000309246 ZC2HC1BQ5TFG8 222 aa7.28□□□□□ -1.24
TPT1-201ENST00000309246 PET117Q6UWS5 81 aa7.28□□□□□ -1.24
TPT1-201ENST00000309246 PMCHL2Q9BQD1 86 aa7.28□□□□□ -1.24
TPT1-201ENST00000309246 LINC01549A6NIU2 74 aa7.27□□□□□ -1.25
TPT1-201ENST00000309246 RPL13AP40429 203 aaKnown RBP7.27□□□□□ -1.25
TPT1-201ENST00000309246 ERASQ7Z444 233 aa7.27□□□□□ -1.25
TPT1-201ENST00000309246 ATOH7Q8N100 152 aa7.27□□□□□ -1.25
TPT1-201ENST00000309246 TOMM7Q9P0U1 55 aa7.26□□□□□ -1.25
TPT1-201ENST00000309246 LINC01561Q8N1V8 128 aa7.25□□□□□ -1.25
TPT1-201ENST00000309246 TIMM17AQ99595 171 aa7.25□□□□□ -1.25
TPT1-201ENST00000309246 HSBP1L1C9JCN9 74 aa7.24□□□□□ -1.25
TPT1-201ENST00000309246 ZNF861PO60384 105 aa7.24□□□□□ -1.25
TPT1-201ENST00000309246 PRSS2P07478 247 aa7.24□□□□□ -1.25
TPT1-201ENST00000309246 CKS1BP61024 79 aa7.24□□□□□ -1.25
TPT1-201ENST00000309246 XAGE1AQ9HD64 81 aa7.24□□□□□ -1.25
TPT1-201ENST00000309246 CHTOPQ9Y3Y2 248 aaKnown RBP7.24□□□□□ -1.25
TPT1-201ENST00000309246 DLEU1O43261 78 aa7.23□□□□□ -1.25
TPT1-201ENST00000309246 TSPAN13O95857 204 aa7.23□□□□□ -1.25
TPT1-201ENST00000309246 PAPPA-AS1Q5QFB9 102 aa7.23□□□□□ -1.25
TPT1-201ENST00000309246 LINC01545Q5VT33 79 aa7.23□□□□□ -1.25
TPT1-201ENST00000309246 AMELXQ99217 191 aa7.23□□□□□ -1.25
TPT1-201ENST00000309246 VCX2Q9H322 139 aa7.23□□□□□ -1.25
TPT1-201ENST00000309246 C22orf24Q9Y442 160 aa7.23□□□□□ -1.25
TPT1-201ENST00000309246 IGIPA6NJ69 53 aa7.22□□□□□ -1.25
TPT1-201ENST00000309246 DPM2O94777 84 aa7.22□□□□□ -1.25
TPT1-201ENST00000309246 PMVKQ15126 192 aa7.22□□□□□ -1.25
TPT1-201ENST00000309246 C6orf226Q5I0X4 101 aa7.22□□□□□ -1.25
TPT1-201ENST00000309246 Q8IZM0 81 aa7.22□□□□□ -1.25
TPT1-201ENST00000309246 TRAV12-1A0A0B4J245 112 aa7.21□□□□□ -1.26
TPT1-201ENST00000309246 IGKCP01834 107 aa7.21□□□□□ -1.26
TPT1-201ENST00000309246 CST9LQ9H4G1 147 aa7.21□□□□□ -1.26
TPT1-201ENST00000309246 A0A087X002 238 aa7.2□□□□□ -1.26
TPT1-201ENST00000309246 PLNP26678 52 aa7.2□□□□□ -1.26
TPT1-201ENST00000309246 FAM19A3Q7Z5A8 133 aa7.2□□□□□ -1.26
TPT1-201ENST00000309246 CDKN2A-AS1Q9UH64 79 aa7.2□□□□□ -1.26
TPT1-201ENST00000309246 F8VRH5 84 aa7.19□□□□□ -1.26
TPT1-201ENST00000309246 SLC25A34Q6PIV7 304 aa7.19□□□□□ -1.26
TPT1-201ENST00000309246 BCE1O60756 84 aa7.18□□□□□ -1.26
TPT1-201ENST00000309246 NPSP0C0P6 89 aa7.18□□□□□ -1.26
TPT1-201ENST00000309246 RPL28P46779 137 aaKnown RBP7.18□□□□□ -1.26
TPT1-201ENST00000309246 HERVK_113P63121 156 aa7.18□□□□□ -1.26
TPT1-201ENST00000309246 BATFQ16520 125 aa7.18□□□□□ -1.26
TPT1-201ENST00000309246 MRPL55Q7Z7F7 128 aaKnown RBP7.18□□□□□ -1.26
TPT1-201ENST00000309246 KRTAP4-7Q9BYR0 210 aa7.18□□□□□ -1.26
TPT1-201ENST00000309246 TP73-AS1Q9UF72 201 aa7.18□□□□□ -1.26
TPT1-201ENST00000309246 A0A0U1RQV1 116 aa7.17□□□□□ -1.26
TPT1-201ENST00000309246 TMEM170BQ5T4T1 132 aa7.17□□□□□ -1.26
TPT1-201ENST00000309246 GEMIN7Q9H840 131 aaKnown RBP7.17□□□□□ -1.26
TPT1-201ENST00000309246 C9orf118A6NHY6 69 aa7.16□□□□□ -1.26
TPT1-201ENST00000309246 C11orf86A6NJI1 115 aa7.16□□□□□ -1.26
TPT1-201ENST00000309246 RPL37AP8A6NKH3 93 aa7.16□□□□□ -1.26
TPT1-201ENST00000309246 CRYGAP11844 174 aa7.16□□□□□ -1.26
TPT1-201ENST00000309246 NMUP48645 174 aa7.16□□□□□ -1.26
TPT1-201ENST00000309246 HERVK_113P61574 105 aa7.16□□□□□ -1.26
TPT1-201ENST00000309246 SEC11AP67812 179 aa7.16□□□□□ -1.26
TPT1-201ENST00000309246 LCE1DQ5T752 114 aa7.16□□□□□ -1.26
TPT1-201ENST00000309246 TYMSOSQ8TAI1 123 aa7.16□□□□□ -1.26
TPT1-201ENST00000309246 GAGE10A6NGK3 116 aa7.15□□□□□ -1.26
TPT1-201ENST00000309246 COX8AP10176 69 aa7.15□□□□□ -1.26
TPT1-201ENST00000309246 CXCL5P42830 114 aa7.15□□□□□ -1.26
TPT1-201ENST00000309246 LINC00167Q96N53 147 aa7.15□□□□□ -1.26
TPT1-201ENST00000309246 ANAPC11Q9NYG5 84 aa7.15□□□□□ -1.26
TPT1-201ENST00000309246 SMIM1B2RUZ4 78 aa7.14□□□□□ -1.27
TPT1-201ENST00000309246 HINT1P49773 126 aaPredicted RBP7.14□□□□□ -1.27
TPT1-201ENST00000309246 KRTAP13-2Q52LG2 175 aa7.13□□□□□ -1.27
TPT1-201ENST00000309246 COX7B2Q8TF08 81 aa7.13□□□□□ -1.27
TPT1-201ENST00000309246 RETNLBQ9BQ08 111 aa7.13□□□□□ -1.27
TPT1-201ENST00000309246 TINCRA0A1B0GVN0 87 aa7.12□□□□□ -1.27
TPT1-201ENST00000309246 H3BRM9 83 aa7.12□□□□□ -1.27
TPT1-201ENST00000309246 UBE2V1Q13404 147 aa7.12□□□□□ -1.27
TPT1-201ENST00000309246 BVES-AS1Q5T3Y7 98 aa7.12□□□□□ -1.27
TPT1-201ENST00000309246 MUC2Q02817 5179 aa7.11□□□□□ -1.27
TPT1-201ENST00000309246 SPINK8P0C7L1 97 aa7.11□□□□□ -1.27
TPT1-201ENST00000309246 ZNF22P17026 224 aaPredicted RBP7.11□□□□□ -1.27
TPT1-201ENST00000309246 UBE2AP49459 152 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms