RNA–Protein interactions for RNA: ENST00000306378.10

BPTF-201, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BPTF, Length 9,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-201ENST00000306378 SMCPP49901 116 aaPredicted RBP13.77□□□□□ -0.21
BPTF-201ENST00000306378 FAM19A4Q96LR4 140 aa13.77□□□□□ -0.21
BPTF-201ENST00000306378 C1orf229Q6ZS94 237 aaPredicted RBP13.75□□□□□ -0.21
BPTF-201ENST00000306378 ATRQ13535 2644 aa13.74□□□□□ -0.21
BPTF-201ENST00000306378 FHL2Q14192 279 aa13.74□□□□□ -0.21
BPTF-201ENST00000306378 CIRBP-AS1Q8TBR5 109 aa13.74□□□□□ -0.21
BPTF-201ENST00000306378 MAST4O15021 2626 aa13.74□□□□□ -0.21
BPTF-201ENST00000306378 SPINK1P00995 79 aa13.74□□□□□ -0.21
BPTF-201ENST00000306378 MSMPQ1L6U9 139 aa13.73□□□□□ -0.21
BPTF-201ENST00000306378 C9orf116Q5BN46 136 aaPredicted RBP13.72□□□□□ -0.21
BPTF-201ENST00000306378 ADORA2A-AS1P86434 159 aa13.72□□□□□ -0.21
BPTF-201ENST00000306378 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.7□□□□□ -0.22
BPTF-201ENST00000306378 PRR3P79522 188 aaKnown RBP13.7□□□□□ -0.22
BPTF-201ENST00000306378 PRLHP81277 87 aa13.7□□□□□ -0.22
BPTF-201ENST00000306378 PLA2G2AP14555 144 aa13.69□□□□□ -0.22
BPTF-201ENST00000306378 Q8NBF4 154 aa13.69□□□□□ -0.22
BPTF-201ENST00000306378 MDFIQ99750 246 aa13.69□□□□□ -0.22
BPTF-201ENST00000306378 TM2D3Q9BRN9 247 aa13.68□□□□□ -0.22
BPTF-201ENST00000306378 MGAM2Q2M2H8 2515 aa13.66□□□□□ -0.22
BPTF-201ENST00000306378 CRIPTQ9P021 101 aa13.66□□□□□ -0.22
BPTF-201ENST00000306378 TRBV7-4A0A0J9YYF1 115 aa13.64□□□□□ -0.23
BPTF-201ENST00000306378 IGKV2D-30A0A075B6S6 120 aa13.64□□□□□ -0.23
BPTF-201ENST00000306378 IGKV2-30P06310 120 aa13.64□□□□□ -0.23
BPTF-201ENST00000306378 SSBP3-AS1Q7Z2R9 100 aa13.63□□□□□ -0.23
BPTF-201ENST00000306378 C6orf223Q8N319 242 aa13.62□□□□□ -0.23
BPTF-201ENST00000306378 NUPR2A6NF83 97 aa13.62□□□□□ -0.23
BPTF-201ENST00000306378 LINC00336Q6ZUF6 198 aa13.62□□□□□ -0.23
BPTF-201ENST00000306378 COA5Q86WW8 74 aa13.61□□□□□ -0.23
BPTF-201ENST00000306378 SPANXA2-OT1Q8N9U9 137 aa13.6□□□□□ -0.23
BPTF-201ENST00000306378 Q9UF83 564 aa13.59□□□□□ -0.23
BPTF-201ENST00000306378 LINC01600Q96MT4 127 aa13.59□□□□□ -0.23
BPTF-201ENST00000306378 NOTCH1P46531 2555 aa13.58□□□□□ -0.23
BPTF-201ENST00000306378 Q6ZRX8 168 aa13.58□□□□□ -0.24
BPTF-201ENST00000306378 IGHV3OR16-9A0A0B4J2B5 98 aa13.57□□□□□ -0.24
BPTF-201ENST00000306378 PLA2G5P39877 138 aa13.56□□□□□ -0.24
BPTF-201ENST00000306378 FAM229AH3BQW9 127 aa13.55□□□□□ -0.24
BPTF-201ENST00000306378 MIR22HGQ0VDD5 57 aa13.55□□□□□ -0.24
BPTF-201ENST00000306378 IGLV4-60A0A075B6I1 120 aa13.55□□□□□ -0.24
BPTF-201ENST00000306378 C11orf71Q6IPW1 123 aa13.55□□□□□ -0.24
BPTF-201ENST00000306378 CDC42SE1Q9NRR8 79 aa13.54□□□□□ -0.24
BPTF-201ENST00000306378 A8MWP4 228 aa13.54□□□□□ -0.24
BPTF-201ENST00000306378 KIAA0087Q14695 138 aa13.54□□□□□ -0.24
BPTF-201ENST00000306378 H7BZZ5 65 aa13.52□□□□□ -0.24
BPTF-201ENST00000306378 FAM218AQ96MZ4 157 aa13.51□□□□□ -0.25
BPTF-201ENST00000306378 Q1T7F1 81 aa13.51□□□□□ -0.25
BPTF-201ENST00000306378 A8MTW9 85 aa13.5□□□□□ -0.25
BPTF-201ENST00000306378 SMCR5Q8TEV8 140 aa13.48□□□□□ -0.25
BPTF-201ENST00000306378 A8MUN3 132 aa13.48□□□□□ -0.25
BPTF-201ENST00000306378 KIF25-AS1Q9Y6Z4 181 aa13.48□□□□□ -0.25
BPTF-201ENST00000306378 DEFB116Q30KQ4 102 aa13.47□□□□□ -0.25
BPTF-201ENST00000306378 FLNAP21333 2647 aaKnown RBP13.46□□□□□ -0.25
BPTF-201ENST00000306378 LY6G6DO95868 133 aa13.46□□□□□ -0.25
BPTF-201ENST00000306378 ODF3L2Q3SX64 289 aa13.46□□□□□ -0.26
BPTF-201ENST00000306378 LINC01006Q8NI28 216 aa13.46□□□□□ -0.26
BPTF-201ENST00000306378 IGLV1-51P01701 117 aa13.45□□□□□ -0.26
BPTF-201ENST00000306378 FSHBP01225 129 aa13.45□□□□□ -0.26
BPTF-201ENST00000306378 LINC01556Q5JQF7 62 aa13.45□□□□□ -0.26
BPTF-201ENST00000306378 CFAP46Q8IYW2 2715 aa13.44□□□□□ -0.26
BPTF-201ENST00000306378 IGLV5-52A0A0A0MRZ9 124 aa13.44□□□□□ -0.26
BPTF-201ENST00000306378 IGLV6-57P01721 117 aa13.43□□□□□ -0.26
BPTF-201ENST00000306378 LUZP6Q538Z0 58 aa13.43□□□□□ -0.26
BPTF-201ENST00000306378 GCN1Q92616 2671 aaKnown RBP13.42□□□□□ -0.26
BPTF-201ENST00000306378 LINC00313P59037 77 aa13.41□□□□□ -0.26
BPTF-201ENST00000306378 Q8NA96 180 aa13.41□□□□□ -0.26
BPTF-201ENST00000306378 GVQW2A0A096LPI5 108 aaPredicted RBP13.4□□□□□ -0.26
BPTF-201ENST00000306378 EPM2AB3EWF7 344 aa13.39□□□□□ -0.27
BPTF-201ENST00000306378 LINC00476Q8WZB0 136 aa13.38□□□□□ -0.27
BPTF-201ENST00000306378 HELZ2Q9BYK8 2649 aaKnown RBP13.37□□□□□ -0.27
BPTF-201ENST00000306378 EDN2P20800 178 aa13.37□□□□□ -0.27
BPTF-201ENST00000306378 STAB1Q9NY15 2570 aa13.37□□□□□ -0.27
BPTF-201ENST00000306378 C22orf24Q9Y442 160 aa13.35□□□□□ -0.27
BPTF-201ENST00000306378 FHL3Q13643 280 aa13.35□□□□□ -0.27
BPTF-201ENST00000306378 LYPD5Q6UWN5 251 aa13.35□□□□□ -0.27
BPTF-201ENST00000306378 H3BNG1 76 aa13.35□□□□□ -0.27
BPTF-201ENST00000306378 DMBT1Q9UGM3 2413 aaPredicted RBP13.34□□□□□ -0.27
BPTF-201ENST00000306378 Q6ZRU5 148 aa13.33□□□□□ -0.27
BPTF-201ENST00000306378 Q6ZSN1 163 aa13.33□□□□□ -0.28
BPTF-201ENST00000306378 PLA2G1BP04054 148 aaKnown RBP13.32□□□□□ -0.28
BPTF-201ENST00000306378 RPL37AP61513 92 aaKnown RBP13.31□□□□□ -0.28
BPTF-201ENST00000306378 IGLV8-61A0A075B6I0 122 aa13.31□□□□□ -0.28
BPTF-201ENST00000306378 C10orf99Q6UWK7 81 aa13.3□□□□□ -0.28
BPTF-201ENST00000306378 LITAFQ99732 161 aa13.3□□□□□ -0.28
BPTF-201ENST00000306378 Q6ZRP5 223 aa13.28□□□□□ -0.28
BPTF-201ENST00000306378 LINC00315P59091 139 aa13.27□□□□□ -0.29
BPTF-201ENST00000306378 K7EQZ3 153 aa13.26□□□□□ -0.29
BPTF-201ENST00000306378 CHD6Q8TD26 2715 aa13.26□□□□□ -0.29
BPTF-201ENST00000306378 ITPR3Q14573 2671 aa13.25□□□□□ -0.29
BPTF-201ENST00000306378 LINC00167Q96N53 147 aa13.25□□□□□ -0.29
BPTF-201ENST00000306378 COL6A5A8TX70 2615 aa13.24□□□□□ -0.29
BPTF-201ENST00000306378 RBM12B-AS1Q9P1G2 102 aa13.24□□□□□ -0.29
BPTF-201ENST00000306378 Q75L30 129 aa13.24□□□□□ -0.29
BPTF-201ENST00000306378 C16orf90A8MZG2 172 aa13.23□□□□□ -0.29
BPTF-201ENST00000306378 COL4A2P08572 1712 aa13.23□□□□□ -0.29
BPTF-201ENST00000306378 A0A1W2PNU3 283 aaPredicted RBP13.23□□□□□ -0.29
BPTF-201ENST00000306378 H3BS24 57 aa13.23□□□□□ -0.29
BPTF-201ENST00000306378 MRPL34Q9BQ48 92 aaKnown RBP13.23□□□□□ -0.29
BPTF-201ENST00000306378 AVPP01185 164 aa13.22□□□□□ -0.29
BPTF-201ENST00000306378 LINC01554Q52M75 96 aa13.22□□□□□ -0.29
BPTF-201ENST00000306378 CENPFP49454 3210 aa13.2□□□□□ -0.3
BPTF-201ENST00000306378 C16orf95Q9H693 158 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms