RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 HERC2O95714 4834 aa15.33■□□□□ 0.04
HOXC9-201ENST00000303450 SCGB1D4Q6XE38 83 aa15.33■□□□□ 0.04
HOXC9-201ENST00000303450 KRTAP17-1Q9BYP8 105 aa15.33■□□□□ 0.04
HOXC9-201ENST00000303450 Q5VSD8 79 aa15.32■□□□□ 0.04
HOXC9-201ENST00000303450 C22orf24Q9Y442 160 aa15.31■□□□□ 0.04
HOXC9-201ENST00000303450 TIMM17BO60830 172 aa15.3■□□□□ 0.04
HOXC9-201ENST00000303450 PYY3Q5JQD4 70 aa15.3■□□□□ 0.04
HOXC9-201ENST00000303450 RPL24P83731 157 aaKnown RBP15.29■□□□□ 0.04
HOXC9-201ENST00000303450 ADAMTSL4-AS1Q5T5F5 129 aa15.29■□□□□ 0.04
HOXC9-201ENST00000303450 NKAPP1Q8N9T2 125 aa15.29■□□□□ 0.04
HOXC9-201ENST00000303450 VAMP8Q9BV40 100 aa15.29■□□□□ 0.04
HOXC9-201ENST00000303450 PAM16Q9Y3D7 125 aa15.28■□□□□ 0.04
HOXC9-201ENST00000303450 FAT1Q14517 4588 aa15.28■□□□□ 0.04
HOXC9-201ENST00000303450 PLA2G1BP04054 148 aaKnown RBP15.27■□□□□ 0.04
HOXC9-201ENST00000303450 BOD1L2Q8IYS8 172 aa15.27■□□□□ 0.04
HOXC9-201ENST00000303450 MIEN1Q9BRT3 115 aa15.27■□□□□ 0.04
HOXC9-201ENST00000303450 IGLV5-37A0A075B6J1 123 aa15.27■□□□□ 0.03
HOXC9-201ENST00000303450 RPL37AP61513 92 aaKnown RBP15.27■□□□□ 0.03
HOXC9-201ENST00000303450 LBHQ53QV2 105 aaPredicted RBP15.27■□□□□ 0.03
HOXC9-201ENST00000303450 LITAFQ99732 161 aa15.27■□□□□ 0.03
HOXC9-201ENST00000303450 TP73-AS1Q9UF72 201 aa15.27■□□□□ 0.03
HOXC9-201ENST00000303450 VPREB1P12018 145 aa15.26■□□□□ 0.03
HOXC9-201ENST00000303450 UBE2BP63146 152 aa15.26■□□□□ 0.03
HOXC9-201ENST00000303450 SPATA45Q537H7 98 aa15.26■□□□□ 0.03
HOXC9-201ENST00000303450 MRPL55Q7Z7F7 128 aaKnown RBP15.26■□□□□ 0.03
HOXC9-201ENST00000303450 TMEM238C9JI98 176 aa15.24■□□□□ 0.03
HOXC9-201ENST00000303450 NPC2P61916 151 aa15.24■□□□□ 0.03
HOXC9-201ENST00000303450 VPS13BQ7Z7G8 4022 aa15.24■□□□□ 0.03
HOXC9-201ENST00000303450 LOC107984156A0A0G2JMH3 177 aa15.23■□□□□ 0.03
HOXC9-201ENST00000303450 ARL17AQ8IVW1 177 aa15.23■□□□□ 0.03
HOXC9-201ENST00000303450 Q8NDZ9 215 aa15.23■□□□□ 0.03
HOXC9-201ENST00000303450 COX8AP10176 69 aa15.22■□□□□ 0.03
HOXC9-201ENST00000303450 GAGE10A6NGK3 116 aa15.21■□□□□ 0.03
HOXC9-201ENST00000303450 LINC00167Q96N53 147 aa15.21■□□□□ 0.03
HOXC9-201ENST00000303450 LINC00308Q8TCZ7 52 aa15.2■□□□□ 0.02
HOXC9-201ENST00000303450 SOSTDC1Q6X4U4 206 aa15.19■□□□□ 0.02
HOXC9-201ENST00000303450 PRR3P79522 188 aaKnown RBP15.18■□□□□ 0.02
HOXC9-201ENST00000303450 KRTAP11-1Q8IUC1 163 aa15.18■□□□□ 0.02
HOXC9-201ENST00000303450 C14orf144Q96I85 54 aa15.18■□□□□ 0.02
HOXC9-201ENST00000303450 SPANXDQ9BXN6 97 aa15.18■□□□□ 0.02
HOXC9-201ENST00000303450 KRTAP4-5Q9BYR2 181 aa15.18■□□□□ 0.02
HOXC9-201ENST00000303450 SPANXCQ9NY87 97 aa15.18■□□□□ 0.02
HOXC9-201ENST00000303450 PSORS1C2Q9UIG4 136 aa15.18■□□□□ 0.02
HOXC9-201ENST00000303450 EIF4EBP3O60516 100 aaPredicted RBP15.17■□□□□ 0.02
HOXC9-201ENST00000303450 RPL37AP8A6NKH3 93 aa15.17■□□□□ 0.02
HOXC9-201ENST00000303450 M0R378 163 aa15.16■□□□□ 0.02
HOXC9-201ENST00000303450 NCR3O14931 201 aa15.16■□□□□ 0.02
HOXC9-201ENST00000303450 DLEU1O43261 78 aa15.16■□□□□ 0.02
HOXC9-201ENST00000303450 KRTAP10-4P60372 401 aaPredicted RBP15.16■□□□□ 0.02
HOXC9-201ENST00000303450 Q6ZVH6 145 aa15.16■□□□□ 0.02
HOXC9-201ENST00000303450 COPS9Q8WXC6 57 aa15.15■□□□□ 0.02
HOXC9-201ENST00000303450 SRRM2Q9UQ35 2752 aaKnown RBP15.14■□□□□ 0.01
HOXC9-201ENST00000303450 NDUFC2O95298 119 aa15.14■□□□□ 0.01
HOXC9-201ENST00000303450 IGKV2-28A0A075B6P5 120 aa15.13■□□□□ 0.01
HOXC9-201ENST00000303450 IGKV2D-28P01615 120 aa15.13■□□□□ 0.01
HOXC9-201ENST00000303450 S100A12P80511 92 aa15.13■□□□□ 0.01
HOXC9-201ENST00000303450 C1orf137Q5JT78 98 aa15.13■□□□□ 0.01
HOXC9-201ENST00000303450 IFITM1P13164 125 aa15.12■□□□□ 0.01
HOXC9-201ENST00000303450 SRSF9Q13242 221 aaKnown RBP eCLIP15.12■□□□□ 0.01
HOXC9-201ENST00000303450 SLC25A34Q6PIV7 304 aa15.12■□□□□ 0.01
HOXC9-201ENST00000303450 SPANXB1Q9NS25 103 aaPredicted RBP15.12■□□□□ 0.01
HOXC9-201ENST00000303450 IGLV1-50A0A075B6I6 118 aa15.1■□□□□ 0.01
HOXC9-201ENST00000303450 TRBV10-2A0A0K0K1G8 114 aa15.09■□□□□ 0.01
HOXC9-201ENST00000303450 MUSTN1Q8IVN3 82 aa15.09■□□□□ 0.01
HOXC9-201ENST00000303450 LOC105371267A0A1B0GV96 52 aa15.07■□□□□ 0
HOXC9-201ENST00000303450 PPDPFQ9H3Y8 114 aa15.07■□□□□ 0
HOXC9-201ENST00000303450 INAFM2P0DMQ5 153 aa15.05■□□□□ -0
HOXC9-201ENST00000303450 TRBV10-3A0A0K0K1G6 114 aa15.04■□□□□ -0
HOXC9-201ENST00000303450 SMIM6P0DI80 62 aa15.04■□□□□ -0
HOXC9-201ENST00000303450 S100A7L2Q5SY68 101 aa15.04■□□□□ -0
HOXC9-201ENST00000303450 HIST1H4GQ99525 98 aa15.04■□□□□ -0
HOXC9-201ENST00000303450 IGLV7-43P04211 117 aa15.03■□□□□ -0
HOXC9-201ENST00000303450 HNRNPA3P51991 378 aaKnown RBP15.03■□□□□ -0
HOXC9-201ENST00000303450 HIGD1BQ9P298 99 aa15.03■□□□□ -0
HOXC9-201ENST00000303450 DDTP30046 118 aa15.02■□□□□ -0
HOXC9-201ENST00000303450 REG3GQ6UW15 175 aa15.02■□□□□ -0
HOXC9-201ENST00000303450 LINC00518Q8N0U6 118 aa15.02■□□□□ -0
HOXC9-201ENST00000303450 ABCA13Q86UQ4 5058 aa15.01□□□□□ -0.01
HOXC9-201ENST00000303450 BCE1O60756 84 aa15.01□□□□□ -0.01
HOXC9-201ENST00000303450 C2orf91Q6ZV80 131 aa15.01□□□□□ -0.01
HOXC9-201ENST00000303450 TMEM126AQ9H061 195 aa15.01□□□□□ -0.01
HOXC9-201ENST00000303450 IGLV6-57P01721 117 aa14.99□□□□□ -0.01
HOXC9-201ENST00000303450 KCNQ1DNQ9H478 68 aa14.99□□□□□ -0.01
HOXC9-201ENST00000303450 PRYO14603 147 aa14.98□□□□□ -0.01
HOXC9-201ENST00000303450 OR13C6PQ8NH95 151 aa14.98□□□□□ -0.01
HOXC9-201ENST00000303450 SPINK6Q6UWN8 80 aa14.97□□□□□ -0.01
HOXC9-201ENST00000303450 UQCR10Q9UDW1 63 aa14.97□□□□□ -0.01
HOXC9-201ENST00000303450 LINC00337Q8N6G1 96 aa14.96□□□□□ -0.02
HOXC9-201ENST00000303450 UBE2AP49459 152 aa14.95□□□□□ -0.02
HOXC9-201ENST00000303450 A4D1N5 150 aa14.94□□□□□ -0.02
HOXC9-201ENST00000303450 FAM19A1Q7Z5A9 133 aa14.94□□□□□ -0.02
HOXC9-201ENST00000303450 ZNF861PO60384 105 aa14.93□□□□□ -0.02
HOXC9-201ENST00000303450 RPL28P46779 137 aaKnown RBP14.93□□□□□ -0.02
HOXC9-201ENST00000303450 CBY1Q9Y3M2 126 aa14.93□□□□□ -0.02
HOXC9-201ENST00000303450 FLG2Q5D862 2391 aaPredicted RBP14.93□□□□□ -0.02
HOXC9-201ENST00000303450 PKHD1L1Q86WI1 4243 aa14.93□□□□□ -0.02
HOXC9-201ENST00000303450 TRAV23DV6A0A075B6W5 121 aa14.92□□□□□ -0.02
HOXC9-201ENST00000303450 A6NDN8 102 aa14.91□□□□□ -0.02
HOXC9-201ENST00000303450 SPRR1AP35321 89 aa14.91□□□□□ -0.02
HOXC9-201ENST00000303450 TAL2Q16559 108 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms