RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 MIR22HGQ0VDD5 57 aa10.3□□□□□ -0.76
SCN3B-201ENST00000299333 LINC01554Q52M75 96 aa10.3□□□□□ -0.76
SCN3B-201ENST00000299333 CUL9Q8IWT3 2517 aa10.29□□□□□ -0.76
SCN3B-201ENST00000299333 RBM12B-AS1Q9P1G2 102 aa10.29□□□□□ -0.76
SCN3B-201ENST00000299333 LINC00315P59091 139 aa10.28□□□□□ -0.76
SCN3B-201ENST00000299333 ELOF1P60002 83 aaKnown RBP10.28□□□□□ -0.76
SCN3B-201ENST00000299333 LINC00167Q96N53 147 aa10.28□□□□□ -0.76
SCN3B-201ENST00000299333 RPL37AP61513 92 aaKnown RBP10.28□□□□□ -0.76
SCN3B-201ENST00000299333 MOBPQ13875 183 aa10.27□□□□□ -0.77
SCN3B-201ENST00000299333 PRR15Q8IV56 129 aa10.27□□□□□ -0.77
SCN3B-201ENST00000299333 Q8NBF4 154 aa10.26□□□□□ -0.77
SCN3B-201ENST00000299333 MUC6Q6W4X9 2439 aa10.26□□□□□ -0.77
SCN3B-201ENST00000299333 SPACA4Q8TDM5 124 aa10.26□□□□□ -0.77
SCN3B-201ENST00000299333 LINC00476Q8WZB0 136 aa10.26□□□□□ -0.77
SCN3B-201ENST00000299333 IGLV5-45A0A087WSX0 123 aa10.24□□□□□ -0.77
SCN3B-201ENST00000299333 A0A1B0GW54 56 aa10.24□□□□□ -0.77
SCN3B-201ENST00000299333 ERC2-IT1O76042 136 aa10.24□□□□□ -0.77
SCN3B-201ENST00000299333 EXPH5Q8NEV8 1989 aa10.23□□□□□ -0.77
SCN3B-201ENST00000299333 SMR3AQ99954 134 aa10.23□□□□□ -0.77
SCN3B-201ENST00000299333 PRO3102Q9H379 93 aa10.23□□□□□ -0.77
SCN3B-201ENST00000299333 LRP4O75096 1905 aa10.23□□□□□ -0.77
SCN3B-201ENST00000299333 CEP192Q8TEP8 1941 aa10.21□□□□□ -0.77
SCN3B-201ENST00000299333 ABCA2Q9BZC7 2435 aa10.21□□□□□ -0.77
SCN3B-201ENST00000299333 ST20-AS1Q8NBB2 130 aa10.21□□□□□ -0.78
SCN3B-201ENST00000299333 COL5A1P20908 1838 aaPredicted RBP10.2□□□□□ -0.78
SCN3B-201ENST00000299333 TRBV7-4A0A0J9YYF1 115 aa10.2□□□□□ -0.78
SCN3B-201ENST00000299333 FHL3Q13643 280 aa10.19□□□□□ -0.78
SCN3B-201ENST00000299333 APLNQ9ULZ1 77 aa10.19□□□□□ -0.78
SCN3B-201ENST00000299333 Q6ZRX8 168 aa10.18□□□□□ -0.78
SCN3B-201ENST00000299333 NAV2Q8IVL1 2488 aa10.18□□□□□ -0.78
SCN3B-201ENST00000299333 LUZP6Q538Z0 58 aa10.18□□□□□ -0.78
SCN3B-201ENST00000299333 C1orf134Q5TEV5 83 aa10.17□□□□□ -0.78
SCN3B-201ENST00000299333 KLKP1Q107X0 134 aa10.17□□□□□ -0.78
SCN3B-201ENST00000299333 LINC00313P59037 77 aa10.16□□□□□ -0.78
SCN3B-201ENST00000299333 K7EQZ3 153 aa10.16□□□□□ -0.78
SCN3B-201ENST00000299333 CPAMD8Q8IZJ3 1885 aa10.16□□□□□ -0.78
SCN3B-201ENST00000299333 H7BZZ5 65 aa10.16□□□□□ -0.78
SCN3B-201ENST00000299333 PTPRSQ13332 1948 aa10.15□□□□□ -0.78
SCN3B-201ENST00000299333 KRTAP10-9P60411 292 aa10.14□□□□□ -0.79
SCN3B-201ENST00000299333 LITAFQ99732 161 aa10.14□□□□□ -0.79
SCN3B-201ENST00000299333 CCDC168Q8NDH2 2452 aa10.13□□□□□ -0.79
SCN3B-201ENST00000299333 CDC42SE1Q9NRR8 79 aa10.13□□□□□ -0.79
SCN3B-201ENST00000299333 C16orf95Q9H693 158 aa10.13□□□□□ -0.79
SCN3B-201ENST00000299333 RAI1Q7Z5J4 1906 aaPredicted RBP10.12□□□□□ -0.79
SCN3B-201ENST00000299333 PHF5AQ7RTV0 110 aaKnown RBP10.12□□□□□ -0.79
SCN3B-201ENST00000299333 A0A1W2PPR1 153 aa10.11□□□□□ -0.79
SCN3B-201ENST00000299333 C9orf129Q5T035 196 aaKnown RBP10.11□□□□□ -0.79
SCN3B-201ENST00000299333 EPM2AB3EWF7 344 aa10.11□□□□□ -0.79
SCN3B-201ENST00000299333 MYO9AB2RTY4 2548 aa10.09□□□□□ -0.79
SCN3B-201ENST00000299333 TTC28Q96AY4 2481 aa10.09□□□□□ -0.79
SCN3B-201ENST00000299333 ZNF462Q96JM2 2506 aa10.09□□□□□ -0.79
SCN3B-201ENST00000299333 A8MWP4 228 aa10.09□□□□□ -0.79
SCN3B-201ENST00000299333 CHTF8P0CG12 524 aa10.07□□□□□ -0.8
SCN3B-201ENST00000299333 Q96NJ1 140 aa10.05□□□□□ -0.8
SCN3B-201ENST00000299333 MRPL34Q9BQ48 92 aaKnown RBP10.05□□□□□ -0.8
SCN3B-201ENST00000299333 IGLV6-57P01721 117 aa10.02□□□□□ -0.8
SCN3B-201ENST00000299333 A0A0A0MQY5 61 aa10.02□□□□□ -0.81
SCN3B-201ENST00000299333 FAM229AH3BQW9 127 aa10.01□□□□□ -0.81
SCN3B-201ENST00000299333 TET2Q6N021 2002 aaPredicted RBP10.01□□□□□ -0.81
SCN3B-201ENST00000299333 Q6ZRP5 223 aa10□□□□□ -0.81
SCN3B-201ENST00000299333 ADAMTS20P59510 1910 aa10□□□□□ -0.81
SCN3B-201ENST00000299333 PIEZO2Q9H5I5 2752 aa10□□□□□ -0.81
SCN3B-201ENST00000299333 EIF4EBP3O60516 100 aaPredicted RBP9.99□□□□□ -0.81
SCN3B-201ENST00000299333 FAM168BA1KXE4 195 aa9.98□□□□□ -0.81
SCN3B-201ENST00000299333 PRAC1Q96KF2 57 aa9.98□□□□□ -0.81
SCN3B-201ENST00000299333 SRCAPQ6ZRS2 3230 aa9.98□□□□□ -0.81
SCN3B-201ENST00000299333 C16orf90A8MZG2 172 aa9.97□□□□□ -0.81
SCN3B-201ENST00000299333 TYMSOSQ8TAI1 123 aa9.96□□□□□ -0.81
SCN3B-201ENST00000299333 FN1P02751 2386 aaKnown RBP9.95□□□□□ -0.82
SCN3B-201ENST00000299333 GVQW2A0A096LPI5 108 aaPredicted RBP9.94□□□□□ -0.82
SCN3B-201ENST00000299333 IGFL1Q6UW32 110 aa9.93□□□□□ -0.82
SCN3B-201ENST00000299333 Q1T7F1 81 aa9.92□□□□□ -0.82
SCN3B-201ENST00000299333 C8orf17Q9NRJ1 99 aa9.92□□□□□ -0.82
SCN3B-201ENST00000299333 DSCR10P59022 87 aa9.91□□□□□ -0.82
SCN3B-201ENST00000299333 H3BNG1 76 aa9.91□□□□□ -0.82
SCN3B-201ENST00000299333 RTL8CO15255 209 aa9.91□□□□□ -0.82
SCN3B-201ENST00000299333 LINC00528Q8N1L1 170 aa9.9□□□□□ -0.82
SCN3B-201ENST00000299333 CSNK1G2-AS1Q8NCQ2 148 aa9.9□□□□□ -0.82
SCN3B-201ENST00000299333 IGLV1-50A0A075B6I6 118 aa9.89□□□□□ -0.83
SCN3B-201ENST00000299333 A0A0D9SG42 100 aa9.89□□□□□ -0.83
SCN3B-201ENST00000299333 A0A0G2JQZ4 141 aa9.89□□□□□ -0.83
SCN3B-201ENST00000299333 A0A1W2PNN7 141 aa9.89□□□□□ -0.83
SCN3B-201ENST00000299333 Q5XG85 94 aa9.88□□□□□ -0.83
SCN3B-201ENST00000299333 KCNQ1DNQ9H478 68 aa9.87□□□□□ -0.83
SCN3B-201ENST00000299333 PTPRBP23467 1997 aa9.86□□□□□ -0.83
SCN3B-201ENST00000299333 LINC00588Q9Y4M8 146 aa9.86□□□□□ -0.83
SCN3B-201ENST00000299333 Q8N377 158 aa9.85□□□□□ -0.83
SCN3B-201ENST00000299333 TLN2Q9Y4G6 2542 aa9.84□□□□□ -0.83
SCN3B-201ENST00000299333 A0A1B0GVX0 72 aa9.84□□□□□ -0.83
SCN3B-201ENST00000299333 Q8NAQ8 132 aa9.81□□□□□ -0.84
SCN3B-201ENST00000299333 IGF2RP11717 2491 aa9.81□□□□□ -0.84
SCN3B-201ENST00000299333 JMJD1CQ15652 2540 aa9.81□□□□□ -0.84
SCN3B-201ENST00000299333 CSAG1Q6PB30 78 aa9.81□□□□□ -0.84
SCN3B-201ENST00000299333 NBDYA0A0U1RRE5 68 aa9.8□□□□□ -0.84
SCN3B-201ENST00000299333 SPANXA2-OT1Q8N9U9 137 aa9.8□□□□□ -0.84
SCN3B-201ENST00000299333 PLA2G2DQ9UNK4 145 aa9.8□□□□□ -0.84
SCN3B-201ENST00000299333 KLK9Q2XQG4 91 aa9.79□□□□□ -0.84
SCN3B-201ENST00000299333 OBSCN-AS1Q96MR7 158 aa9.79□□□□□ -0.84
SCN3B-201ENST00000299333 ABCA12Q86UK0 2595 aa9.78□□□□□ -0.84
SCN3B-201ENST00000299333 F8P00451 2351 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms