RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 KLK12Q9UKR0 248 aa13.33□□□□□ -0.27
NFIL3-201ENST00000297689 SPAG11BQ08648 103 aa13.33□□□□□ -0.28
NFIL3-201ENST00000297689 SLPIP03973 132 aa13.32□□□□□ -0.28
NFIL3-201ENST00000297689 DNAH3Q8TD57 4116 aa13.31□□□□□ -0.28
NFIL3-201ENST00000297689 GVQW2A0A096LPI5 108 aaPredicted RBP13.3□□□□□ -0.28
NFIL3-201ENST00000297689 H3BNG1 76 aa13.3□□□□□ -0.28
NFIL3-201ENST00000297689 GAGE2AQ6NT46 116 aa13.3□□□□□ -0.28
NFIL3-201ENST00000297689 Q8N814 137 aa13.3□□□□□ -0.28
NFIL3-201ENST00000297689 ORMDL1Q9P0S3 153 aa13.3□□□□□ -0.28
NFIL3-201ENST00000297689 C14orf132Q9NPU4 83 aa13.29□□□□□ -0.28
NFIL3-201ENST00000297689 LINC00526Q96FQ7 95 aa13.28□□□□□ -0.28
NFIL3-201ENST00000297689 NCR3O14931 201 aa13.26□□□□□ -0.29
NFIL3-201ENST00000297689 KRTAP26-1Q6PEX3 210 aa13.25□□□□□ -0.29
NFIL3-201ENST00000297689 MDFIQ99750 246 aa13.25□□□□□ -0.29
NFIL3-201ENST00000297689 C6orf99Q4VX62 202 aa13.24□□□□□ -0.29
NFIL3-201ENST00000297689 KPRPQ5T749 579 aaPredicted RBP13.24□□□□□ -0.29
NFIL3-201ENST00000297689 IGLV6-57P01721 117 aa13.23□□□□□ -0.29
NFIL3-201ENST00000297689 C6orf48Q9UBA6 75 aa13.23□□□□□ -0.29
NFIL3-201ENST00000297689 CCDC179H3BU77 68 aa13.22□□□□□ -0.29
NFIL3-201ENST00000297689 WFDC10BQ8IUB3 73 aa13.22□□□□□ -0.29
NFIL3-201ENST00000297689 LINC00575Q6W349 94 aa13.22□□□□□ -0.29
NFIL3-201ENST00000297689 NOTCH1P46531 2555 aa13.21□□□□□ -0.29
NFIL3-201ENST00000297689 TMEM256-PLSCR3K7ERE1 68 aa13.21□□□□□ -0.29
NFIL3-201ENST00000297689 LINC00846Q9NV44 126 aa13.21□□□□□ -0.29
NFIL3-201ENST00000297689 S100A7L2Q5SY68 101 aa13.2□□□□□ -0.3
NFIL3-201ENST00000297689 NBEAL1Q6ZS30 2694 aa13.2□□□□□ -0.3
NFIL3-201ENST00000297689 Q6ZTC4 211 aa13.2□□□□□ -0.3
NFIL3-201ENST00000297689 FAM236AA0A1B0GUQ0 79 aa13.19□□□□□ -0.3
NFIL3-201ENST00000297689 FAM236BA0A1B0GV22 79 aa13.19□□□□□ -0.3
NFIL3-201ENST00000297689 JMJD7-PLA2G4BH0Y9G9 81 aa13.19□□□□□ -0.3
NFIL3-201ENST00000297689 CCKP06307 115 aa13.19□□□□□ -0.3
NFIL3-201ENST00000297689 B5MCH6 92 aa13.17□□□□□ -0.3
NFIL3-201ENST00000297689 MGAM2Q2M2H8 2515 aa13.16□□□□□ -0.3
NFIL3-201ENST00000297689 RPL18AQ02543 176 aaKnown RBP13.16□□□□□ -0.3
NFIL3-201ENST00000297689 ESRGQ1W209 222 aa13.16□□□□□ -0.3
NFIL3-201ENST00000297689 Q6JHZ5 121 aa13.15□□□□□ -0.3
NFIL3-201ENST00000297689 HIST1H4AP62805 103 aaKnown RBP13.14□□□□□ -0.31
NFIL3-201ENST00000297689 TENM3Q9P273 2699 aa13.13□□□□□ -0.31
NFIL3-201ENST00000297689 hADV29S1A0JD25 119 aa13.12□□□□□ -0.31
NFIL3-201ENST00000297689 C15orf56Q8N910 161 aa13.12□□□□□ -0.31
NFIL3-201ENST00000297689 XAGE1AQ9HD64 81 aa13.12□□□□□ -0.31
NFIL3-201ENST00000297689 TRBV10-3A0A0K0K1G6 114 aa13.11□□□□□ -0.31
NFIL3-201ENST00000297689 PRB2P02812 416 aaPredicted RBP13.11□□□□□ -0.31
NFIL3-201ENST00000297689 ZNF561-AS1K7EIQ3 104 aa13.1□□□□□ -0.31
NFIL3-201ENST00000297689 HIGD2BQ4VC39 106 aa13.1□□□□□ -0.31
NFIL3-201ENST00000297689 C2orf48Q96LS8 159 aa13.09□□□□□ -0.31
NFIL3-201ENST00000297689 VPREB1P12018 145 aa13.09□□□□□ -0.31
NFIL3-201ENST00000297689 LINC01556Q5JQF7 62 aa13.09□□□□□ -0.31
NFIL3-201ENST00000297689 CAMK2N2Q96S95 79 aa13.09□□□□□ -0.31
NFIL3-201ENST00000297689 Q6ZRU5 148 aa13.08□□□□□ -0.32
NFIL3-201ENST00000297689 TRAV23DV6A0A075B6W5 121 aa13.07□□□□□ -0.32
NFIL3-201ENST00000297689 DEFB131BA0A096LNP1 70 aa13.05□□□□□ -0.32
NFIL3-201ENST00000297689 IGKV3D-7A0A0C4DH55 119 aa13.05□□□□□ -0.32
NFIL3-201ENST00000297689 SS18L2Q9UHA2 77 aa13.05□□□□□ -0.32
NFIL3-201ENST00000297689 TRBV7-6A0A0J9YX20 115 aa13.04□□□□□ -0.32
NFIL3-201ENST00000297689 KRTAP21-3Q3LHN1 58 aa13.04□□□□□ -0.32
NFIL3-201ENST00000297689 C11orf45Q8TAV5 145 aa13.04□□□□□ -0.32
NFIL3-201ENST00000297689 DIRC1Q969H9 104 aa13.04□□□□□ -0.32
NFIL3-201ENST00000297689 LOC110117498A0A087WWA1 95 aa13.04□□□□□ -0.32
NFIL3-201ENST00000297689 NDUFC2-KCTD14E9PQ53 114 aa13.04□□□□□ -0.32
NFIL3-201ENST00000297689 K7EIL1 84 aa13.04□□□□□ -0.32
NFIL3-201ENST00000297689 HUWE1Q7Z6Z7 4374 aaKnown RBP13.04□□□□□ -0.32
NFIL3-201ENST00000297689 F8WDY8 70 aa13.03□□□□□ -0.32
NFIL3-201ENST00000297689 ZNF73O43830 326 aaPredicted RBP13.03□□□□□ -0.32
NFIL3-201ENST00000297689 Q6ZQT0 140 aa13.03□□□□□ -0.32
NFIL3-201ENST00000297689 Q6ZQY7 126 aa13.03□□□□□ -0.32
NFIL3-201ENST00000297689 C1orf43Q9BWL3 253 aa13.03□□□□□ -0.32
NFIL3-201ENST00000297689 H3BQ85 93 aa13.02□□□□□ -0.33
NFIL3-201ENST00000297689 ELOF1P60002 83 aaKnown RBP13.02□□□□□ -0.33
NFIL3-201ENST00000297689 RBM3P98179 157 aaKnown RBP13.02□□□□□ -0.33
NFIL3-201ENST00000297689 M0R378 163 aa13.01□□□□□ -0.33
NFIL3-201ENST00000297689 DNAH10OSP0CZ25 163 aa13□□□□□ -0.33
NFIL3-201ENST00000297689 TM2D3Q9BRN9 247 aa13□□□□□ -0.33
NFIL3-201ENST00000297689 C3orf22Q8N5N4 141 aa13□□□□□ -0.33
NFIL3-201ENST00000297689 COX7BP24311 80 aa12.99□□□□□ -0.33
NFIL3-201ENST00000297689 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.99□□□□□ -0.33
NFIL3-201ENST00000297689 UQCRQO14949 82 aa12.98□□□□□ -0.33
NFIL3-201ENST00000297689 Q6ZRP5 223 aa12.98□□□□□ -0.33
NFIL3-201ENST00000297689 ATOX1O00244 68 aa12.98□□□□□ -0.33
NFIL3-201ENST00000297689 ATP5EP2Q5VTU8 51 aa12.98□□□□□ -0.33
NFIL3-201ENST00000297689 IGKV2D-24A0A075B6R9 120 aa12.97□□□□□ -0.33
NFIL3-201ENST00000297689 A0A087WVE0 104 aa12.97□□□□□ -0.33
NFIL3-201ENST00000297689 MRAPQ8TCY5 172 aa12.97□□□□□ -0.33
NFIL3-201ENST00000297689 COX7CP15954 63 aa12.96□□□□□ -0.33
NFIL3-201ENST00000297689 LAMTOR3Q9UHA4 124 aa12.96□□□□□ -0.33
NFIL3-201ENST00000297689 DNHD1Q96M86 4753 aa12.95□□□□□ -0.34
NFIL3-201ENST00000297689 M0R2N4 97 aa12.95□□□□□ -0.34
NFIL3-201ENST00000297689 SYCNQ0VAF6 134 aa12.95□□□□□ -0.34
NFIL3-201ENST00000297689 LINC00528Q8N1L1 170 aa12.95□□□□□ -0.34
NFIL3-201ENST00000297689 PDE6GP18545 87 aa12.93□□□□□ -0.34
NFIL3-201ENST00000297689 UBL5Q9BZL1 73 aa12.92□□□□□ -0.34
NFIL3-201ENST00000297689 DNAH1Q9P2D7 4330 aa12.92□□□□□ -0.34
NFIL3-201ENST00000297689 TRBV7-4A0A0J9YYF1 115 aa12.92□□□□□ -0.34
NFIL3-201ENST00000297689 DSCR8Q96T75 97 aa12.9□□□□□ -0.34
NFIL3-201ENST00000297689 TRAV10A0A0B4J240 114 aa12.9□□□□□ -0.34
NFIL3-201ENST00000297689 USP17L23D6RBM5 183 aa12.9□□□□□ -0.34
NFIL3-201ENST00000297689 TLX1NBP0CAT3 122 aa12.9□□□□□ -0.34
NFIL3-201ENST00000297689 GHRHP01286 108 aa12.89□□□□□ -0.35
NFIL3-201ENST00000297689 C9orf153Q5TBE3 101 aa12.89□□□□□ -0.35
NFIL3-201ENST00000297689 LINC00588Q9Y4M8 146 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms