RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 IBA57-AS1B1ANH7 110 aa10.78□□□□□ -0.68
UBAP1-201ENST00000297661 JMJD7-PLA2G4BH0Y9G9 81 aa10.78□□□□□ -0.68
UBAP1-201ENST00000297661 LYPD5Q6UWN5 251 aa10.78□□□□□ -0.68
UBAP1-201ENST00000297661 SPATA3Q8NHX4 192 aa10.77□□□□□ -0.69
UBAP1-201ENST00000297661 DEFB4AO15263 64 aa10.77□□□□□ -0.69
UBAP1-201ENST00000297661 LINC00336Q6ZUF6 198 aa10.77□□□□□ -0.69
UBAP1-201ENST00000297661 SERP1Q9Y6X1 66 aa10.77□□□□□ -0.69
UBAP1-201ENST00000297661 EPM2AB3EWF7 344 aa10.76□□□□□ -0.69
UBAP1-201ENST00000297661 H7BZZ5 65 aa10.76□□□□□ -0.69
UBAP1-201ENST00000297661 C16orf95Q9H693 158 aa10.76□□□□□ -0.69
UBAP1-201ENST00000297661 IGHV3OR16-9A0A0B4J2B5 98 aa10.76□□□□□ -0.69
UBAP1-201ENST00000297661 UBL5Q9BZL1 73 aa10.76□□□□□ -0.69
UBAP1-201ENST00000297661 GYPEP15421 78 aa10.75□□□□□ -0.69
UBAP1-201ENST00000297661 TRBV10-3A0A0K0K1G6 114 aa10.75□□□□□ -0.69
UBAP1-201ENST00000297661 CMC4P56277 68 aaPredicted RBP10.75□□□□□ -0.69
UBAP1-201ENST00000297661 LINC00167Q96N53 147 aa10.75□□□□□ -0.69
UBAP1-201ENST00000297661 LINC00482Q8N8I6 264 aa10.74□□□□□ -0.69
UBAP1-201ENST00000297661 PRO0628Q9UI54 55 aa10.74□□□□□ -0.69
UBAP1-201ENST00000297661 Q8N814 137 aa10.73□□□□□ -0.69
UBAP1-201ENST00000297661 TMEM256-PLSCR3K7ERE1 68 aa10.73□□□□□ -0.69
UBAP1-201ENST00000297661 LINC00959A0A1B0GUT2 108 aa10.72□□□□□ -0.69
UBAP1-201ENST00000297661 Q8N3U1 123 aa10.72□□□□□ -0.69
UBAP1-201ENST00000297661 TRAV7A0A075B6U4 112 aa10.71□□□□□ -0.69
UBAP1-201ENST00000297661 MGAM2Q2M2H8 2515 aa10.71□□□□□ -0.69
UBAP1-201ENST00000297661 A0A087WZ39 114 aa10.7□□□□□ -0.7
UBAP1-201ENST00000297661 NANOS2P60321 138 aaKnown RBP10.7□□□□□ -0.7
UBAP1-201ENST00000297661 C6orf226Q5I0X4 101 aa10.7□□□□□ -0.7
UBAP1-201ENST00000297661 PRR3P79522 188 aaKnown RBP10.69□□□□□ -0.7
UBAP1-201ENST00000297661 SNURFQ9Y675 71 aa10.69□□□□□ -0.7
UBAP1-201ENST00000297661 NOTCH1P46531 2555 aa10.69□□□□□ -0.7
UBAP1-201ENST00000297661 ANK2Q01484 3957 aa10.68□□□□□ -0.7
UBAP1-201ENST00000297661 IGLV10-54A0A075B6I4 117 aa10.68□□□□□ -0.7
UBAP1-201ENST00000297661 KLKP1Q107X0 134 aa10.68□□□□□ -0.7
UBAP1-201ENST00000297661 C1orf43Q9BWL3 253 aa10.68□□□□□ -0.7
UBAP1-201ENST00000297661 X6R8D5 127 aa10.68□□□□□ -0.7
UBAP1-201ENST00000297661 RMI2Q96E14 147 aa10.67□□□□□ -0.7
UBAP1-201ENST00000297661 FP248Q71RG6 208 aaPredicted RBP10.67□□□□□ -0.7
UBAP1-201ENST00000297661 DEFB135Q30KP9 77 aa10.66□□□□□ -0.7
UBAP1-201ENST00000297661 TRAV10A0A0B4J240 114 aa10.66□□□□□ -0.7
UBAP1-201ENST00000297661 BCE1O60756 84 aa10.66□□□□□ -0.7
UBAP1-201ENST00000297661 SMIM26A0A096LP01 95 aa10.65□□□□□ -0.7
UBAP1-201ENST00000297661 F8WEM9 126 aa10.65□□□□□ -0.7
UBAP1-201ENST00000297661 LINC01547P58512 204 aaPredicted RBP10.64□□□□□ -0.71
UBAP1-201ENST00000297661 HAMPP81172 84 aa10.64□□□□□ -0.71
UBAP1-201ENST00000297661 LINC00269Q8N2A0 174 aa10.64□□□□□ -0.71
UBAP1-201ENST00000297661 Q6ZQT0 140 aa10.64□□□□□ -0.71
UBAP1-201ENST00000297661 M0R2N4 97 aa10.63□□□□□ -0.71
UBAP1-201ENST00000297661 NBEAL1Q6ZS30 2694 aa10.63□□□□□ -0.71
UBAP1-201ENST00000297661 RBM3P98179 157 aaKnown RBP10.63□□□□□ -0.71
UBAP1-201ENST00000297661 C9orf116Q5BN46 136 aaPredicted RBP10.63□□□□□ -0.71
UBAP1-201ENST00000297661 PRO0255Q9UI72 69 aa10.63□□□□□ -0.71
UBAP1-201ENST00000297661 PKIGQ9Y2B9 76 aa10.62□□□□□ -0.71
UBAP1-201ENST00000297661 LINC00612Q8N6U2 182 aa10.61□□□□□ -0.71
UBAP1-201ENST00000297661 C6orf99Q4VX62 202 aa10.61□□□□□ -0.71
UBAP1-201ENST00000297661 HTN3P15516 51 aa10.6□□□□□ -0.71
UBAP1-201ENST00000297661 Q6ZVQ6 151 aa10.6□□□□□ -0.71
UBAP1-201ENST00000297661 ANGP03950 147 aaKnown RBP10.6□□□□□ -0.71
UBAP1-201ENST00000297661 LINC00474Q9P2X8 69 aa10.6□□□□□ -0.71
UBAP1-201ENST00000297661 CMYA5Q8N3K9 4069 aa10.6□□□□□ -0.71
UBAP1-201ENST00000297661 LAMTOR3Q9UHA4 124 aa10.59□□□□□ -0.71
UBAP1-201ENST00000297661 LOC110117498A0A087WWA1 95 aa10.58□□□□□ -0.72
UBAP1-201ENST00000297661 CELA1Q9UNI1 258 aa10.58□□□□□ -0.72
UBAP1-201ENST00000297661 TRBV7-6A0A0J9YX20 115 aa10.58□□□□□ -0.72
UBAP1-201ENST00000297661 A0A1B0GUV1 79 aa10.57□□□□□ -0.72
UBAP1-201ENST00000297661 ZNF561-AS1K7EIQ3 104 aa10.57□□□□□ -0.72
UBAP1-201ENST00000297661 Q8IZM0 81 aa10.57□□□□□ -0.72
UBAP1-201ENST00000297661 IGHV4-28A0A0C4DH34 117 aa10.57□□□□□ -0.72
UBAP1-201ENST00000297661 LINC00575Q6W349 94 aa10.57□□□□□ -0.72
UBAP1-201ENST00000297661 CHCHD10Q8WYQ3 142 aaPredicted RBP10.57□□□□□ -0.72
UBAP1-201ENST00000297661 TM2D3Q9BRN9 247 aa10.56□□□□□ -0.72
UBAP1-201ENST00000297661 C6orf223Q8N319 242 aa10.55□□□□□ -0.72
UBAP1-201ENST00000297661 DAD1P61803 113 aa10.55□□□□□ -0.72
UBAP1-201ENST00000297661 REG3AQ06141 175 aa10.55□□□□□ -0.72
UBAP1-201ENST00000297661 Q8NDZ9 215 aa10.55□□□□□ -0.72
UBAP1-201ENST00000297661 CXCL6P80162 114 aa10.54□□□□□ -0.72
UBAP1-201ENST00000297661 KIAA0087Q14695 138 aa10.54□□□□□ -0.72
UBAP1-201ENST00000297661 NDUFC1O43677 76 aa10.54□□□□□ -0.72
UBAP1-201ENST00000297661 OXLD1Q5BKU9 147 aa10.54□□□□□ -0.72
UBAP1-201ENST00000297661 BRK1Q8WUW1 75 aa10.53□□□□□ -0.72
UBAP1-201ENST00000297661 TRBV7-4A0A0J9YYF1 115 aa10.53□□□□□ -0.72
UBAP1-201ENST00000297661 CD164L2Q6UWJ8 174 aa10.52□□□□□ -0.72
UBAP1-201ENST00000297661 SCXQ7RTU7 201 aa10.52□□□□□ -0.72
UBAP1-201ENST00000297661 MIFP14174 115 aa10.52□□□□□ -0.73
UBAP1-201ENST00000297661 C10orf25Q5T742 122 aa10.52□□□□□ -0.73
UBAP1-201ENST00000297661 LYRM9A8MSI8 78 aa10.51□□□□□ -0.73
UBAP1-201ENST00000297661 PRB2P02812 416 aaPredicted RBP10.51□□□□□ -0.73
UBAP1-201ENST00000297661 ATP5EP56381 51 aaPredicted RBP10.5□□□□□ -0.73
UBAP1-201ENST00000297661 KRTAP21-3Q3LHN1 58 aa10.5□□□□□ -0.73
UBAP1-201ENST00000297661 C9orf66Q5T8R8 295 aa10.5□□□□□ -0.73
UBAP1-201ENST00000297661 COX17Q14061 63 aa10.49□□□□□ -0.73
UBAP1-201ENST00000297661 UNQ6190/PRO20217Q6UXQ8 127 aa10.49□□□□□ -0.73
UBAP1-201ENST00000297661 A0A0U1RQV1 116 aa10.49□□□□□ -0.73
UBAP1-201ENST00000297661 F8WDY8 70 aa10.49□□□□□ -0.73
UBAP1-201ENST00000297661 Q6ZQY7 126 aa10.49□□□□□ -0.73
UBAP1-201ENST00000297661 NREPQ16612 68 aa10.48□□□□□ -0.73
UBAP1-201ENST00000297661 KLK12Q9UKR0 248 aa10.48□□□□□ -0.73
UBAP1-201ENST00000297661 PDE6GP18545 87 aa10.48□□□□□ -0.73
UBAP1-201ENST00000297661 MUC7Q8TAX7 377 aa10.48□□□□□ -0.73
UBAP1-201ENST00000297661 Q8NAQ8 132 aa10.47□□□□□ -0.73
UBAP1-201ENST00000297661 TMEM254Q8TBM7 123 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms