RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 HTN3P15516 51 aa11.45□□□□□ -0.58
CHRNE-201ENST00000293780 C6orf99Q4VX62 202 aa11.45□□□□□ -0.58
CHRNE-201ENST00000293780 C9orf66Q5T8R8 295 aa11.44□□□□□ -0.58
CHRNE-201ENST00000293780 CCKP06307 115 aa11.44□□□□□ -0.58
CHRNE-201ENST00000293780 CYSRT1A8MQ03 144 aa11.43□□□□□ -0.58
CHRNE-201ENST00000293780 SERP2Q8N6R1 65 aa11.42□□□□□ -0.58
CHRNE-201ENST00000293780 Q8NAQ8 132 aa11.42□□□□□ -0.58
CHRNE-201ENST00000293780 TMEM256-PLSCR3K7ERE1 68 aa11.41□□□□□ -0.58
CHRNE-201ENST00000293780 RPS28P62857 69 aaKnown RBP11.41□□□□□ -0.58
CHRNE-201ENST00000293780 SPAG11BQ08648 103 aa11.41□□□□□ -0.58
CHRNE-201ENST00000293780 S100A7L2Q5SY68 101 aa11.41□□□□□ -0.58
CHRNE-201ENST00000293780 NSD1Q96L73 2696 aaPredicted RBP11.4□□□□□ -0.58
CHRNE-201ENST00000293780 APOC4P55056 127 aa11.4□□□□□ -0.58
CHRNE-201ENST00000293780 USP17L23D6RBM5 183 aa11.4□□□□□ -0.59
CHRNE-201ENST00000293780 UPK3BQ9BT76 320 aa11.4□□□□□ -0.59
CHRNE-201ENST00000293780 KLK12Q9UKR0 248 aa11.4□□□□□ -0.59
CHRNE-201ENST00000293780 JMJD7-PLA2G4BH0Y9G9 81 aa11.39□□□□□ -0.59
CHRNE-201ENST00000293780 TMEM258P61165 79 aa11.38□□□□□ -0.59
CHRNE-201ENST00000293780 C5orf47Q569G3 176 aa11.38□□□□□ -0.59
CHRNE-201ENST00000293780 LELP1Q5T871 98 aa11.37□□□□□ -0.59
CHRNE-201ENST00000293780 LINC00575Q6W349 94 aa11.37□□□□□ -0.59
CHRNE-201ENST00000293780 ENHOQ6UWT2 76 aa11.36□□□□□ -0.59
CHRNE-201ENST00000293780 WFDC9Q8NEX5 89 aa11.36□□□□□ -0.59
CHRNE-201ENST00000293780 DPH3Q96FX2 82 aa11.36□□□□□ -0.59
CHRNE-201ENST00000293780 SPART-AS1P0CW21 52 aa11.35□□□□□ -0.59
CHRNE-201ENST00000293780 F8P00451 2351 aa11.35□□□□□ -0.59
CHRNE-201ENST00000293780 MIFP14174 115 aa11.35□□□□□ -0.59
CHRNE-201ENST00000293780 ATRQ13535 2644 aa11.35□□□□□ -0.59
CHRNE-201ENST00000293780 A0A0J9YWU9 116 aa11.34□□□□□ -0.59
CHRNE-201ENST00000293780 IGHV4-30-4P0DP06 118 aa11.34□□□□□ -0.59
CHRNE-201ENST00000293780 PRR34Q9NV39 138 aa11.34□□□□□ -0.59
CHRNE-201ENST00000293780 DSCR8Q96T75 97 aa11.33□□□□□ -0.6
CHRNE-201ENST00000293780 IGLV6-57P01721 117 aa11.32□□□□□ -0.6
CHRNE-201ENST00000293780 XAGE1AQ9HD64 81 aa11.32□□□□□ -0.6
CHRNE-201ENST00000293780 C6orf48Q9UBA6 75 aa11.31□□□□□ -0.6
CHRNE-201ENST00000293780 M0R2N4 97 aa11.3□□□□□ -0.6
CHRNE-201ENST00000293780 LYPD5Q6UWN5 251 aa11.3□□□□□ -0.6
CHRNE-201ENST00000293780 FAM19A1Q7Z5A9 133 aa11.3□□□□□ -0.6
CHRNE-201ENST00000293780 OXTP01178 125 aa11.3□□□□□ -0.6
CHRNE-201ENST00000293780 TEP1Q99973 2627 aaKnown RBP11.29□□□□□ -0.6
CHRNE-201ENST00000293780 LAMTOR3Q9UHA4 124 aa11.29□□□□□ -0.6
CHRNE-201ENST00000293780 TRBV10-3A0A0K0K1G6 114 aa11.29□□□□□ -0.6
CHRNE-201ENST00000293780 RBM3P98179 157 aaKnown RBP11.29□□□□□ -0.6
CHRNE-201ENST00000293780 ANK2Q01484 3957 aa11.28□□□□□ -0.6
CHRNE-201ENST00000293780 GHRHP01286 108 aa11.28□□□□□ -0.6
CHRNE-201ENST00000293780 TRAV23DV6A0A075B6W5 121 aa11.28□□□□□ -0.6
CHRNE-201ENST00000293780 Q6ZQT0 140 aa11.28□□□□□ -0.6
CHRNE-201ENST00000293780 Q6ZQY7 126 aa11.27□□□□□ -0.61
CHRNE-201ENST00000293780 ZNF561-AS1K7EIQ3 104 aa11.27□□□□□ -0.61
CHRNE-201ENST00000293780 HIGD2BQ4VC39 106 aa11.26□□□□□ -0.61
CHRNE-201ENST00000293780 ATP5EP2Q5VTU8 51 aa11.26□□□□□ -0.61
CHRNE-201ENST00000293780 MUC7Q8TAX7 377 aa11.26□□□□□ -0.61
CHRNE-201ENST00000293780 GVQW2A0A096LPI5 108 aaPredicted RBP11.26□□□□□ -0.61
CHRNE-201ENST00000293780 WFDC10BQ8IUB3 73 aa11.26□□□□□ -0.61
CHRNE-201ENST00000293780 UBL5Q9BZL1 73 aa11.26□□□□□ -0.61
CHRNE-201ENST00000293780 PKD1L1Q8TDX9 2849 aa11.25□□□□□ -0.61
CHRNE-201ENST00000293780 RETNQ9HD89 108 aa11.24□□□□□ -0.61
CHRNE-201ENST00000293780 LOC110117498A0A087WWA1 95 aa11.22□□□□□ -0.61
CHRNE-201ENST00000293780 DIRC1Q969H9 104 aa11.21□□□□□ -0.61
CHRNE-201ENST00000293780 C4orf26Q17RF5 130 aa11.21□□□□□ -0.61
CHRNE-201ENST00000293780 ZNF73O43830 326 aaPredicted RBP11.2□□□□□ -0.62
CHRNE-201ENST00000293780 KPRPQ5T749 579 aaPredicted RBP11.2□□□□□ -0.62
CHRNE-201ENST00000293780 CAMK2N2Q96S95 79 aa11.2□□□□□ -0.62
CHRNE-201ENST00000293780 C20orf197Q8N268 126 aa11.19□□□□□ -0.62
CHRNE-201ENST00000293780 KRTAP26-1Q6PEX3 210 aa11.19□□□□□ -0.62
CHRNE-201ENST00000293780 Q5XG85 94 aa11.18□□□□□ -0.62
CHRNE-201ENST00000293780 Q6ZRU5 148 aa11.18□□□□□ -0.62
CHRNE-201ENST00000293780 NDUFC2-KCTD14E9PQ53 114 aa11.18□□□□□ -0.62
CHRNE-201ENST00000293780 VPREB1P12018 145 aa11.18□□□□□ -0.62
CHRNE-201ENST00000293780 COX7BP24311 80 aa11.18□□□□□ -0.62
CHRNE-201ENST00000293780 HAMPP81172 84 aa11.17□□□□□ -0.62
CHRNE-201ENST00000293780 CMYA5Q8N3K9 4069 aa11.17□□□□□ -0.62
CHRNE-201ENST00000293780 LINC01547P58512 204 aaPredicted RBP11.16□□□□□ -0.62
CHRNE-201ENST00000293780 Q6ZTC4 211 aa11.16□□□□□ -0.62
CHRNE-201ENST00000293780 Q6ZVQ6 151 aa11.16□□□□□ -0.62
CHRNE-201ENST00000293780 OXLD1Q5BKU9 147 aa11.16□□□□□ -0.62
CHRNE-201ENST00000293780 HRCT1Q6UXD1 115 aa11.16□□□□□ -0.62
CHRNE-201ENST00000293780 C15orf56Q8N910 161 aa11.16□□□□□ -0.62
CHRNE-201ENST00000293780 ELOF1P60002 83 aaKnown RBP11.15□□□□□ -0.62
CHRNE-201ENST00000293780 MAST4O15021 2626 aa11.14□□□□□ -0.63
CHRNE-201ENST00000293780 WIPF1O43516 503 aa11.14□□□□□ -0.63
CHRNE-201ENST00000293780 ESRGQ1W209 222 aa11.14□□□□□ -0.63
CHRNE-201ENST00000293780 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.14□□□□□ -0.63
CHRNE-201ENST00000293780 KRTAP10-11P60412 298 aa11.13□□□□□ -0.63
CHRNE-201ENST00000293780 EGFEM1PQ0D2K5 195 aa11.13□□□□□ -0.63
CHRNE-201ENST00000293780 FAM236DA0A1B0GTK5 79 aa11.12□□□□□ -0.63
CHRNE-201ENST00000293780 FAM236CP0DP71 79 aa11.12□□□□□ -0.63
CHRNE-201ENST00000293780 TENM3Q9P273 2699 aa11.11□□□□□ -0.63
CHRNE-201ENST00000293780 M0R378 163 aa11.11□□□□□ -0.63
CHRNE-201ENST00000293780 TRBV7-4A0A0J9YYF1 115 aa11.11□□□□□ -0.63
CHRNE-201ENST00000293780 Q6ZRP5 223 aa11.11□□□□□ -0.63
CHRNE-201ENST00000293780 H3BQ85 93 aa11.1□□□□□ -0.63
CHRNE-201ENST00000293780 PDE6GP18545 87 aa11.1□□□□□ -0.63
CHRNE-201ENST00000293780 KRTAP24-1Q3LI83 254 aa11.1□□□□□ -0.63
CHRNE-201ENST00000293780 TRAV7A0A075B6U4 112 aa11.09□□□□□ -0.63
CHRNE-201ENST00000293780 TRAV10A0A0B4J240 114 aa11.09□□□□□ -0.63
CHRNE-201ENST00000293780 H3BNG1 76 aa11.09□□□□□ -0.63
CHRNE-201ENST00000293780 SCXQ7RTU7 201 aa11.09□□□□□ -0.63
CHRNE-201ENST00000293780 TRBV7-6A0A0J9YX20 115 aa11.08□□□□□ -0.64
CHRNE-201ENST00000293780 H7BZZ5 65 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms