RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 C2orf88Q9BSF0 95 aa5.82□□□□□ -1.48
LRTM1-201ENST00000273286 C6orf48Q9UBA6 75 aa5.82□□□□□ -1.48
LRTM1-201ENST00000273286 M0QXV9 152 aa5.82□□□□□ -1.48
LRTM1-201ENST00000273286 SERF1AO75920 110 aa5.82□□□□□ -1.48
LRTM1-201ENST00000273286 ATP5LO75964 103 aa5.82□□□□□ -1.48
LRTM1-201ENST00000273286 UNQ6190/PRO20217Q6UXQ8 127 aa5.82□□□□□ -1.48
LRTM1-201ENST00000273286 ERASQ7Z444 233 aa5.82□□□□□ -1.48
LRTM1-201ENST00000273286 FAM19A5Q7Z5A7 132 aaPredicted RBP5.82□□□□□ -1.48
LRTM1-201ENST00000273286 SCGB3A1Q96QR1 104 aa5.82□□□□□ -1.48
LRTM1-201ENST00000273286 S100A6P06703 90 aa5.81□□□□□ -1.48
LRTM1-201ENST00000273286 GAGE2EQ4V326 116 aa5.81□□□□□ -1.48
LRTM1-201ENST00000273286 TEX43Q6ZNM6 134 aa5.81□□□□□ -1.48
LRTM1-201ENST00000273286 FAM104AQ969W3 186 aa5.81□□□□□ -1.48
LRTM1-201ENST00000273286 VCX2Q9H322 139 aa5.81□□□□□ -1.48
LRTM1-201ENST00000273286 GAGE2DQ9UEU5 116 aa5.81□□□□□ -1.48
LRTM1-201ENST00000273286 A0A0U1RQV1 116 aa5.8□□□□□ -1.48
LRTM1-201ENST00000273286 FAM168BA1KXE4 195 aa5.8□□□□□ -1.48
LRTM1-201ENST00000273286 IGIPA6NJ69 53 aa5.8□□□□□ -1.48
LRTM1-201ENST00000273286 KIAA0087Q14695 138 aa5.8□□□□□ -1.48
LRTM1-201ENST00000273286 COA6Q5JTJ3 125 aaKnown RBP5.8□□□□□ -1.48
LRTM1-201ENST00000273286 HSPB8Q9UJY1 196 aa5.8□□□□□ -1.48
LRTM1-201ENST00000273286 IGLV4-3A0A075B6K6 122 aa5.79□□□□□ -1.48
LRTM1-201ENST00000273286 NUPR1O60356 82 aa5.79□□□□□ -1.48
LRTM1-201ENST00000273286 LEPROTL1O95214 131 aa5.79□□□□□ -1.48
LRTM1-201ENST00000273286 KRTAP1-4P0C5Y4 121 aa5.79□□□□□ -1.48
LRTM1-201ENST00000273286 NDUFA6P56556 154 aa5.79□□□□□ -1.48
LRTM1-201ENST00000273286 SEC11AP67812 179 aa5.79□□□□□ -1.48
LRTM1-201ENST00000273286 PMCHL1Q16048 86 aa5.79□□□□□ -1.48
LRTM1-201ENST00000273286 PDZD11Q5EBL8 140 aa5.79□□□□□ -1.48
LRTM1-201ENST00000273286 LINC00242Q5T6M2 205 aa5.79□□□□□ -1.48
LRTM1-201ENST00000273286 A0A096LNJ9 63 aa5.78□□□□□ -1.48
LRTM1-201ENST00000273286 CKS1BP61024 79 aa5.78□□□□□ -1.48
LRTM1-201ENST00000273286 FAM19A2Q8N3H0 131 aa5.78□□□□□ -1.48
LRTM1-201ENST00000273286 ZNF861PO60384 105 aa5.77□□□□□ -1.49
LRTM1-201ENST00000273286 PMVKQ15126 192 aa5.77□□□□□ -1.49
LRTM1-201ENST00000273286 LBHQ53QV2 105 aaPredicted RBP5.77□□□□□ -1.49
LRTM1-201ENST00000273286 KRTAP11-1Q8IUC1 163 aa5.77□□□□□ -1.49
LRTM1-201ENST00000273286 Q8IZM0 81 aa5.77□□□□□ -1.49
LRTM1-201ENST00000273286 AMELXQ99217 191 aa5.77□□□□□ -1.49
LRTM1-201ENST00000273286 LPAP08519 4548 aa5.77□□□□□ -1.49
LRTM1-201ENST00000273286 S100A2P29034 98 aa5.76□□□□□ -1.49
LRTM1-201ENST00000273286 PRR4Q16378 134 aa5.76□□□□□ -1.49
LRTM1-201ENST00000273286 C6orf226Q5I0X4 101 aa5.76□□□□□ -1.49
LRTM1-201ENST00000273286 C9orf129Q5T035 196 aaKnown RBP5.76□□□□□ -1.49
LRTM1-201ENST00000273286 C2orf82Q6UX34 121 aa5.76□□□□□ -1.49
LRTM1-201ENST00000273286 KRTAP7-1Q8IUC3 87 aa5.76□□□□□ -1.49
LRTM1-201ENST00000273286 IFI27L1Q96BM0 104 aa5.76□□□□□ -1.49
LRTM1-201ENST00000273286 MUC2Q02817 5179 aa5.76□□□□□ -1.49
LRTM1-201ENST00000273286 HERVK_113P63121 156 aa5.75□□□□□ -1.49
LRTM1-201ENST00000273286 FAM19A3Q7Z5A8 133 aa5.75□□□□□ -1.49
LRTM1-201ENST00000273286 MAP1LC3CQ9BXW4 147 aa5.75□□□□□ -1.49
LRTM1-201ENST00000273286 GEMIN7Q9H840 131 aaKnown RBP5.75□□□□□ -1.49
LRTM1-201ENST00000273286 TP73-AS1Q9UF72 201 aa5.75□□□□□ -1.49
LRTM1-201ENST00000273286 TRAV12-1A0A0B4J245 112 aa5.74□□□□□ -1.49
LRTM1-201ENST00000273286 FABP4P15090 132 aa5.74□□□□□ -1.49
LRTM1-201ENST00000273286 CXCL5P42830 114 aa5.74□□□□□ -1.49
LRTM1-201ENST00000273286 RPL28P46779 137 aaKnown RBP5.74□□□□□ -1.49
LRTM1-201ENST00000273286 LINC00173Q6ZV60 143 aa5.74□□□□□ -1.49
LRTM1-201ENST00000273286 CST9LQ9H4G1 147 aa5.74□□□□□ -1.49
LRTM1-201ENST00000273286 KRTAP9-6A8MVA2 160 aa5.74□□□□□ -1.49
LRTM1-201ENST00000273286 F8VRH5 84 aa5.74□□□□□ -1.49
LRTM1-201ENST00000273286 TOMM7Q9P0U1 55 aa5.74□□□□□ -1.49
LRTM1-201ENST00000273286 C22orf24Q9Y442 160 aa5.74□□□□□ -1.49
LRTM1-201ENST00000273286 TINCRA0A1B0GVN0 87 aa5.73□□□□□ -1.49
LRTM1-201ENST00000273286 H3BRM9 83 aa5.73□□□□□ -1.49
LRTM1-201ENST00000273286 AKR1D1P51857 326 aa5.73□□□□□ -1.49
LRTM1-201ENST00000273286 LINC01547P58512 204 aaPredicted RBP5.73□□□□□ -1.49
LRTM1-201ENST00000273286 KRTAP5-1Q6L8H4 278 aa5.73□□□□□ -1.49
LRTM1-201ENST00000273286 CHTOPQ9Y3Y2 248 aaKnown RBP5.73□□□□□ -1.49
LRTM1-201ENST00000273286 C20orf202A1L168 122 aa5.72□□□□□ -1.49
LRTM1-201ENST00000273286 H0Y8G0 127 aa5.72□□□□□ -1.49
LRTM1-201ENST00000273286 CRYGAP11844 174 aa5.72□□□□□ -1.49
LRTM1-201ENST00000273286 MRPL55Q7Z7F7 128 aaKnown RBP5.72□□□□□ -1.49
LRTM1-201ENST00000273286 HIST3H2BBQ8N257 126 aa5.72□□□□□ -1.49
LRTM1-201ENST00000273286 LINC00469Q8N7U9 141 aa5.72□□□□□ -1.49
LRTM1-201ENST00000273286 BCE1O60756 84 aa5.71□□□□□ -1.5
LRTM1-201ENST00000273286 IGLC3P0DOY3 106 aa5.71□□□□□ -1.5
LRTM1-201ENST00000273286 PLNP26678 52 aa5.71□□□□□ -1.5
LRTM1-201ENST00000273286 SEC61BP60468 96 aaKnown RBP5.71□□□□□ -1.5
LRTM1-201ENST00000273286 SNRPEP62304 92 aaKnown RBP5.71□□□□□ -1.5
LRTM1-201ENST00000273286 ZC2HC1BQ5TFG8 222 aa5.71□□□□□ -1.5
LRTM1-201ENST00000273286 PET117Q6UWS5 81 aa5.71□□□□□ -1.5
LRTM1-201ENST00000273286 IGLV5-45A0A087WSX0 123 aa5.7□□□□□ -1.5
LRTM1-201ENST00000273286 C5orf52A6NGY3 159 aa5.7□□□□□ -1.5
LRTM1-201ENST00000273286 SYS1-DBNDD2H3BUS1 97 aa5.7□□□□□ -1.5
LRTM1-201ENST00000273286 CTAG1AP78358 180 aa5.7□□□□□ -1.5
LRTM1-201ENST00000273286 TYMSOSQ8TAI1 123 aa5.7□□□□□ -1.5
LRTM1-201ENST00000273286 XAGE1AQ9HD64 81 aa5.7□□□□□ -1.5
LRTM1-201ENST00000273286 DPM2O94777 84 aa5.69□□□□□ -1.5
LRTM1-201ENST00000273286 KRTDAPP60985 99 aa5.69□□□□□ -1.5
LRTM1-201ENST00000273286 TMEM170BQ5T4T1 132 aa5.69□□□□□ -1.5
LRTM1-201ENST00000273286 HIST1H2BLQ99880 126 aa5.69□□□□□ -1.5
LRTM1-201ENST00000273286 CDKN2A-AS1Q9UH64 79 aa5.69□□□□□ -1.5
LRTM1-201ENST00000273286 C11orf86A6NJI1 115 aa5.67□□□□□ -1.5
LRTM1-201ENST00000273286 TSPAN13O95857 204 aa5.67□□□□□ -1.5
LRTM1-201ENST00000273286 IGKCP01834 107 aa5.67□□□□□ -1.5
LRTM1-201ENST00000273286 C3orf79P0CE67 100 aa5.67□□□□□ -1.5
LRTM1-201ENST00000273286 HERVK_113P61574 105 aa5.67□□□□□ -1.5
LRTM1-201ENST00000273286 A0A087X002 238 aa5.66□□□□□ -1.5
LRTM1-201ENST00000273286 ZNF22P17026 224 aaPredicted RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms