RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 KRTAP9-2Q9BYQ4 174 aa8.31□□□□□ -1.08
COMMD4-201ENST00000267935 ANAPC11Q9NYG5 84 aa8.31□□□□□ -1.08
COMMD4-201ENST00000267935 H3BRM9 83 aa8.3□□□□□ -1.08
COMMD4-201ENST00000267935 PMVKQ15126 192 aa8.3□□□□□ -1.08
COMMD4-201ENST00000267935 LINC00310P59036 64 aa8.29□□□□□ -1.08
COMMD4-201ENST00000267935 CST9LQ9H4G1 147 aa8.29□□□□□ -1.08
COMMD4-201ENST00000267935 IGLV7-46A0A075B6I9 117 aa8.28□□□□□ -1.08
COMMD4-201ENST00000267935 IGLV5-45A0A087WSX0 123 aa8.28□□□□□ -1.08
COMMD4-201ENST00000267935 KRTAP13-2Q52LG2 175 aa8.28□□□□□ -1.08
COMMD4-201ENST00000267935 IFI27L1Q96BM0 104 aa8.28□□□□□ -1.08
COMMD4-201ENST00000267935 IGKV2-28A0A075B6P5 120 aa8.27□□□□□ -1.09
COMMD4-201ENST00000267935 LEPROTL1O95214 131 aa8.27□□□□□ -1.09
COMMD4-201ENST00000267935 IGKV2D-28P01615 120 aa8.27□□□□□ -1.09
COMMD4-201ENST00000267935 SPINK8P0C7L1 97 aa8.27□□□□□ -1.09
COMMD4-201ENST00000267935 RPL24P83731 157 aaKnown RBP8.27□□□□□ -1.09
COMMD4-201ENST00000267935 TPRXLQ17RH7 258 aa8.27□□□□□ -1.09
COMMD4-201ENST00000267935 KRTAP13-1Q8IUC0 172 aa8.27□□□□□ -1.09
COMMD4-201ENST00000267935 RETNLBQ9BQ08 111 aa8.27□□□□□ -1.09
COMMD4-201ENST00000267935 FABP4P15090 132 aa8.26□□□□□ -1.09
COMMD4-201ENST00000267935 FAM19A1Q7Z5A9 133 aa8.26□□□□□ -1.09
COMMD4-201ENST00000267935 HSPB8Q9UJY1 196 aa8.26□□□□□ -1.09
COMMD4-201ENST00000267935 PFN2P35080 140 aa8.25□□□□□ -1.09
COMMD4-201ENST00000267935 H0Y8G0 127 aa8.24□□□□□ -1.09
COMMD4-201ENST00000267935 C4orf48Q5BLP8 95 aa8.24□□□□□ -1.09
COMMD4-201ENST00000267935 LCE2AQ5TA79 106 aaPredicted RBP8.24□□□□□ -1.09
COMMD4-201ENST00000267935 SPAG11AQ6PDA7 123 aa8.24□□□□□ -1.09
COMMD4-201ENST00000267935 COX17Q14061 63 aa8.23□□□□□ -1.09
COMMD4-201ENST00000267935 COA6Q5JTJ3 125 aaKnown RBP8.23□□□□□ -1.09
COMMD4-201ENST00000267935 TMEM126AQ9H061 195 aa8.23□□□□□ -1.09
COMMD4-201ENST00000267935 CHTOPQ9Y3Y2 248 aaKnown RBP8.23□□□□□ -1.09
COMMD4-201ENST00000267935 TRAV12-1A0A0B4J245 112 aa8.22□□□□□ -1.09
COMMD4-201ENST00000267935 IGLC3P0DOY3 106 aa8.22□□□□□ -1.09
COMMD4-201ENST00000267935 PRLHP81277 87 aa8.22□□□□□ -1.09
COMMD4-201ENST00000267935 S100A6P06703 90 aa8.21□□□□□ -1.1
COMMD4-201ENST00000267935 SFTA2Q6UW10 78 aa8.21□□□□□ -1.1
COMMD4-201ENST00000267935 PLEKHB2Q96CS7 222 aa8.21□□□□□ -1.1
COMMD4-201ENST00000267935 MAP1LC3CQ9BXW4 147 aa8.21□□□□□ -1.1
COMMD4-201ENST00000267935 PPDPFQ9H3Y8 114 aa8.21□□□□□ -1.1
COMMD4-201ENST00000267935 SND1-IT1Q9HBX3 110 aa8.21□□□□□ -1.1
COMMD4-201ENST00000267935 FAT4Q6V0I7 4981 aa8.2□□□□□ -1.1
COMMD4-201ENST00000267935 VPREB1P12018 145 aa8.2□□□□□ -1.1
COMMD4-201ENST00000267935 LINC00337Q8N6G1 96 aa8.2□□□□□ -1.1
COMMD4-201ENST00000267935 ERG28Q9UKR5 140 aa8.2□□□□□ -1.1
COMMD4-201ENST00000267935 C11orf86A6NJI1 115 aa8.19□□□□□ -1.1
COMMD4-201ENST00000267935 TMEM238C9JI98 176 aa8.19□□□□□ -1.1
COMMD4-201ENST00000267935 TMEM170BQ5T4T1 132 aa8.19□□□□□ -1.1
COMMD4-201ENST00000267935 ZNF22P17026 224 aaPredicted RBP8.18□□□□□ -1.1
COMMD4-201ENST00000267935 FP248Q71RG6 208 aaPredicted RBP8.18□□□□□ -1.1
COMMD4-201ENST00000267935 HIGD2AQ9BW72 106 aa8.18□□□□□ -1.1
COMMD4-201ENST00000267935 IGLV5-39A0A0G2JS06 123 aa8.17□□□□□ -1.1
COMMD4-201ENST00000267935 M0R378 163 aa8.17□□□□□ -1.1
COMMD4-201ENST00000267935 S100A2P29034 98 aa8.17□□□□□ -1.1
COMMD4-201ENST00000267935 ZNF706Q9Y5V0 76 aaPredicted RBP8.17□□□□□ -1.1
COMMD4-201ENST00000267935 SYS1-DBNDD2H3BUS1 97 aa8.15□□□□□ -1.1
COMMD4-201ENST00000267935 C3orf22Q8N5N4 141 aa8.15□□□□□ -1.1
COMMD4-201ENST00000267935 ZNF625Q96I27 306 aaPredicted RBP8.15□□□□□ -1.1
COMMD4-201ENST00000267935 PMCHL2Q9BQD1 86 aa8.15□□□□□ -1.1
COMMD4-201ENST00000267935 KRTAP9-6A0A140TA67 174 aa8.14□□□□□ -1.11
COMMD4-201ENST00000267935 DPM2O94777 84 aa8.14□□□□□ -1.11
COMMD4-201ENST00000267935 PLNP26678 52 aa8.14□□□□□ -1.11
COMMD4-201ENST00000267935 LINC00158P58513 81 aa8.14□□□□□ -1.11
COMMD4-201ENST00000267935 KRTDAPP60985 99 aa8.14□□□□□ -1.11
COMMD4-201ENST00000267935 HIST3H2BBQ8N257 126 aa8.14□□□□□ -1.11
COMMD4-201ENST00000267935 IGKCP01834 107 aa8.13□□□□□ -1.11
COMMD4-201ENST00000267935 PET117Q6UWS5 81 aa8.13□□□□□ -1.11
COMMD4-201ENST00000267935 SPRR4Q96PI1 79 aa8.13□□□□□ -1.11
COMMD4-201ENST00000267935 TMEM223A0PJW6 202 aa8.12□□□□□ -1.11
COMMD4-201ENST00000267935 C3orf79P0CE67 100 aa8.12□□□□□ -1.11
COMMD4-201ENST00000267935 SNRPEP62304 92 aaKnown RBP8.12□□□□□ -1.11
COMMD4-201ENST00000267935 C20orf202A1L168 122 aa8.11□□□□□ -1.11
COMMD4-201ENST00000267935 SPINK1P00995 79 aa8.1□□□□□ -1.11
COMMD4-201ENST00000267935 LINC01547P58512 204 aaPredicted RBP8.1□□□□□ -1.11
COMMD4-201ENST00000267935 HERVK_113P61574 105 aa8.1□□□□□ -1.11
COMMD4-201ENST00000267935 S100A12P80511 92 aa8.1□□□□□ -1.11
COMMD4-201ENST00000267935 LINC01545Q5VT33 79 aa8.1□□□□□ -1.11
COMMD4-201ENST00000267935 HIST1H2BLQ99880 126 aa8.1□□□□□ -1.11
COMMD4-201ENST00000267935 NDUFA12Q9UI09 145 aa8.09□□□□□ -1.11
COMMD4-201ENST00000267935 C5orf52A6NGY3 159 aa8.08□□□□□ -1.12
COMMD4-201ENST00000267935 LINC00587B1AMM8 73 aa8.08□□□□□ -1.12
COMMD4-201ENST00000267935 PRYO14603 147 aa8.08□□□□□ -1.12
COMMD4-201ENST00000267935 SEC61BP60468 96 aaKnown RBP8.08□□□□□ -1.12
COMMD4-201ENST00000267935 Q8NBF4 154 aa8.08□□□□□ -1.12
COMMD4-201ENST00000267935 ETDCA0A1B0GVM5 59 aa8.07□□□□□ -1.12
COMMD4-201ENST00000267935 ASB16-AS1Q495Z4 193 aa8.07□□□□□ -1.12
COMMD4-201ENST00000267935 SMCR5Q8TEV8 140 aa8.07□□□□□ -1.12
COMMD4-201ENST00000267935 TMA7Q9Y2S6 64 aaKnown RBP8.07□□□□□ -1.12
COMMD4-201ENST00000267935 A0A0U1RRA0 63 aa8.06□□□□□ -1.12
COMMD4-201ENST00000267935 BOD1L2Q8IYS8 172 aa8.06□□□□□ -1.12
COMMD4-201ENST00000267935 DAND5Q8N907 189 aa8.06□□□□□ -1.12
COMMD4-201ENST00000267935 Q8NDZ9 215 aa8.06□□□□□ -1.12
COMMD4-201ENST00000267935 MUC17Q685J3 4493 aa8.05□□□□□ -1.12
COMMD4-201ENST00000267935 LEPROTO15243 131 aa8.05□□□□□ -1.12
COMMD4-201ENST00000267935 KRTAP13-3Q3SY46 172 aa8.05□□□□□ -1.12
COMMD4-201ENST00000267935 KCNQ1DNQ9H478 68 aa8.05□□□□□ -1.12
COMMD4-201ENST00000267935 LGALS3P17931 250 aaKnown RBP8.04□□□□□ -1.12
COMMD4-201ENST00000267935 AKR1D1P51857 326 aa8.04□□□□□ -1.12
COMMD4-201ENST00000267935 MEIG1Q5JSS6 88 aa8.04□□□□□ -1.12
COMMD4-201ENST00000267935 HERV-K104P63124 156 aa8.03□□□□□ -1.12
COMMD4-201ENST00000267935 SSBP3-AS1Q7Z2R9 100 aa8.03□□□□□ -1.12
COMMD4-201ENST00000267935 MYMXA0A1B0GTQ4 84 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms