RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 IGHV4-31P0DP07 118 aa4.11□□□□□ -1.75
VCAN-201ENST00000265077 C11orf21Q9P2W6 132 aa4.11□□□□□ -1.75
VCAN-201ENST00000265077 IGLV1-40P01703 118 aa4.11□□□□□ -1.75
VCAN-201ENST00000265077 C11orf71Q6IPW1 123 aa4.11□□□□□ -1.75
VCAN-201ENST00000265077 CYP4F30PQ9H0H9 118 aa4.11□□□□□ -1.75
VCAN-201ENST00000265077 HIGD2AQ9BW72 106 aa4.11□□□□□ -1.75
VCAN-201ENST00000265077 Q8N9L7 120 aa4.11□□□□□ -1.75
VCAN-201ENST00000265077 RETNLBQ9BQ08 111 aa4.11□□□□□ -1.75
VCAN-201ENST00000265077 AMELXQ99217 191 aa4.11□□□□□ -1.75
VCAN-201ENST00000265077 WFDC13Q8IUB5 93 aa4.11□□□□□ -1.75
VCAN-201ENST00000265077 LRBAP50851 2863 aa4.1□□□□□ -1.75
VCAN-201ENST00000265077 XAGE1AQ9HD64 81 aa4.1□□□□□ -1.75
VCAN-201ENST00000265077 hDV103S1A0JD37 113 aa4.1□□□□□ -1.75
VCAN-201ENST00000265077 PROK1P58294 105 aa4.1□□□□□ -1.75
VCAN-201ENST00000265077 ZNF706Q9Y5V0 76 aaPredicted RBP4.1□□□□□ -1.75
VCAN-201ENST00000265077 TM2D3Q9BRN9 247 aa4.1□□□□□ -1.75
VCAN-201ENST00000265077 CHCHD7Q9BUK0 85 aa4.1□□□□□ -1.75
VCAN-201ENST00000265077 SPAG11AQ6PDA7 123 aa4.09□□□□□ -1.75
VCAN-201ENST00000265077 ZNF843Q8N446 348 aa4.09□□□□□ -1.75
VCAN-201ENST00000265077 DEFB131BA0A096LNP1 70 aa4.09□□□□□ -1.76
VCAN-201ENST00000265077 TRAV10A0A0B4J240 114 aa4.09□□□□□ -1.76
VCAN-201ENST00000265077 NSD1Q96L73 2696 aaPredicted RBP4.08□□□□□ -1.76
VCAN-201ENST00000265077 KPRPQ5T749 579 aaPredicted RBP4.08□□□□□ -1.76
VCAN-201ENST00000265077 TRAV22A0A0B4J277 110 aa4.08□□□□□ -1.76
VCAN-201ENST00000265077 BBC3Q96PG8 261 aaPredicted RBP4.08□□□□□ -1.76
VCAN-201ENST00000265077 IGKV2-24A0A0C4DH68 120 aa4.08□□□□□ -1.76
VCAN-201ENST00000265077 SMIM1B2RUZ4 78 aa4.08□□□□□ -1.76
VCAN-201ENST00000265077 WISP2O76076 250 aa4.08□□□□□ -1.76
VCAN-201ENST00000265077 ZNF580Q9UK33 172 aa4.07□□□□□ -1.76
VCAN-201ENST00000265077 A8MUN3 132 aa4.07□□□□□ -1.76
VCAN-201ENST00000265077 C10orf142B7Z368 130 aa4.07□□□□□ -1.76
VCAN-201ENST00000265077 FAM218AQ96MZ4 157 aa4.07□□□□□ -1.76
VCAN-201ENST00000265077 LINC00337Q8N6G1 96 aa4.07□□□□□ -1.76
VCAN-201ENST00000265077 A0A1B0GUV1 79 aa4.07□□□□□ -1.76
VCAN-201ENST00000265077 CYSRT1A8MQ03 144 aa4.06□□□□□ -1.76
VCAN-201ENST00000265077 C10orf25Q5T742 122 aa4.06□□□□□ -1.76
VCAN-201ENST00000265077 ASH1LQ9NR48 2969 aaKnown RBP4.06□□□□□ -1.76
VCAN-201ENST00000265077 A0A0J9YWU9 116 aa4.06□□□□□ -1.76
VCAN-201ENST00000265077 EGFEM1PQ0D2K5 195 aa4.06□□□□□ -1.76
VCAN-201ENST00000265077 ZNF702PQ9H963 129 aa4.06□□□□□ -1.76
VCAN-201ENST00000265077 COL4A2P08572 1712 aa4.06□□□□□ -1.76
VCAN-201ENST00000265077 LOC110117498A0A087WWA1 95 aa4.05□□□□□ -1.76
VCAN-201ENST00000265077 C1orf137Q5JT78 98 aa4.05□□□□□ -1.76
VCAN-201ENST00000265077 LINC01600Q96MT4 127 aa4.05□□□□□ -1.76
VCAN-201ENST00000265077 CELSR2Q9HCU4 2923 aa4.05□□□□□ -1.76
VCAN-201ENST00000265077 Q6ZRU5 148 aa4.05□□□□□ -1.76
VCAN-201ENST00000265077 Q8N2B8 174 aa4.05□□□□□ -1.76
VCAN-201ENST00000265077 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.05□□□□□ -1.76
VCAN-201ENST00000265077 IGKV2-28A0A075B6P5 120 aa4.05□□□□□ -1.76
VCAN-201ENST00000265077 IGKV2D-28P01615 120 aa4.05□□□□□ -1.76
VCAN-201ENST00000265077 H0Y9P7 68 aa4.04□□□□□ -1.76
VCAN-201ENST00000265077 C19orf84I3L1E1 186 aa4.04□□□□□ -1.76
VCAN-201ENST00000265077 Q1T7F1 81 aa4.04□□□□□ -1.76
VCAN-201ENST00000265077 NF1P21359 2839 aa4.04□□□□□ -1.76
VCAN-201ENST00000265077 C9orf116Q5BN46 136 aaPredicted RBP4.04□□□□□ -1.76
VCAN-201ENST00000265077 FP248Q71RG6 208 aaPredicted RBP4.04□□□□□ -1.76
VCAN-201ENST00000265077 C10orf99Q6UWK7 81 aa4.04□□□□□ -1.76
VCAN-201ENST00000265077 LOC100131303A0A0U1RQF7 123 aa4.04□□□□□ -1.76
VCAN-201ENST00000265077 C1orf64Q8NEQ6 169 aa4.03□□□□□ -1.76
VCAN-201ENST00000265077 COX6A2Q02221 97 aa4.03□□□□□ -1.76
VCAN-201ENST00000265077 LOC101927531A0A1B0GV80 90 aa4.03□□□□□ -1.76
VCAN-201ENST00000265077 SMIM29Q86T20 159 aa4.03□□□□□ -1.76
VCAN-201ENST00000265077 A0A096LNI7 61 aa4.03□□□□□ -1.76
VCAN-201ENST00000265077 Q6ZQT0 140 aa4.03□□□□□ -1.76
VCAN-201ENST00000265077 C7orf33Q8WU49 177 aa4.03□□□□□ -1.76
VCAN-201ENST00000265077 NIPBLQ6KC79 2804 aaeCLIP4.03□□□□□ -1.76
VCAN-201ENST00000265077 IGLV5-39A0A0G2JS06 123 aa4.02□□□□□ -1.77
VCAN-201ENST00000265077 IGSF10Q6WRI0 2623 aa4.02□□□□□ -1.77
VCAN-201ENST00000265077 A0A1B0GW54 56 aa4.02□□□□□ -1.77
VCAN-201ENST00000265077 RPL37AP8A6NKH3 93 aa4.02□□□□□ -1.77
VCAN-201ENST00000265077 ODF3L2Q3SX64 289 aa4.02□□□□□ -1.77
VCAN-201ENST00000265077 UNQ6190/PRO20217Q6UXQ8 127 aa4.02□□□□□ -1.77
VCAN-201ENST00000265077 KIF25-AS1Q9Y6Z4 181 aa4.02□□□□□ -1.77
VCAN-201ENST00000265077 LINC00575Q6W349 94 aa4.02□□□□□ -1.77
VCAN-201ENST00000265077 ZZEF1O43149 2961 aa4.02□□□□□ -1.77
VCAN-201ENST00000265077 REG3GQ6UW15 175 aa4.01□□□□□ -1.77
VCAN-201ENST00000265077 H3BPC8 53 aa4.01□□□□□ -1.77
VCAN-201ENST00000265077 SPATA3Q8NHX4 192 aa4.01□□□□□ -1.77
VCAN-201ENST00000265077 DMXL2Q8TDJ6 3036 aa4.01□□□□□ -1.77
VCAN-201ENST00000265077 OXTP01178 125 aa4.01□□□□□ -1.77
VCAN-201ENST00000265077 CYSTM1Q9H1C7 97 aa4□□□□□ -1.77
VCAN-201ENST00000265077 CDC42SE1Q9NRR8 79 aa4□□□□□ -1.77
VCAN-201ENST00000265077 ELOF1P60002 83 aaKnown RBP4□□□□□ -1.77
VCAN-201ENST00000265077 PRUNE2Q8WUY3 3088 aa4□□□□□ -1.77
VCAN-201ENST00000265077 IGLV4-60A0A075B6I1 120 aa4□□□□□ -1.77
VCAN-201ENST00000265077 LITAFQ99732 161 aa4□□□□□ -1.77
VCAN-201ENST00000265077 IGLV1-51P01701 117 aa4□□□□□ -1.77
VCAN-201ENST00000265077 SPINK6Q6UWN8 80 aa4□□□□□ -1.77
VCAN-201ENST00000265077 IGLV5-45A0A087WSX0 123 aa4□□□□□ -1.77
VCAN-201ENST00000265077 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.99□□□□□ -1.77
VCAN-201ENST00000265077 TP53AIP1Q9HCN2 124 aa3.99□□□□□ -1.77
VCAN-201ENST00000265077 LINC01554Q52M75 96 aa3.99□□□□□ -1.77
VCAN-201ENST00000265077 C6orf223Q8N319 242 aa3.99□□□□□ -1.77
VCAN-201ENST00000265077 LINC01006Q8NI28 216 aa3.99□□□□□ -1.77
VCAN-201ENST00000265077 PCOTHQ58A44 107 aa3.99□□□□□ -1.77
VCAN-201ENST00000265077 PRO3102Q9H379 93 aa3.99□□□□□ -1.77
VCAN-201ENST00000265077 IGLV9-49A0A0B4J1Y8 123 aa3.99□□□□□ -1.77
VCAN-201ENST00000265077 CRYBG3Q68DQ2 2970 aa3.98□□□□□ -1.77
VCAN-201ENST00000265077 C18orf65Q6ZTR6 163 aa3.98□□□□□ -1.77
VCAN-201ENST00000265077 LYPD5Q6UWN5 251 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms