RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 WNK1Q9H4A3 2382 aa10.3□□□□□ -0.76
XRCC1-201ENST00000262887 ZNF561-AS1K7EIQ3 104 aa10.3□□□□□ -0.76
XRCC1-201ENST00000262887 IGHV4-31P0DP07 118 aa10.3□□□□□ -0.76
XRCC1-201ENST00000262887 LINC00575Q6W349 94 aa10.3□□□□□ -0.76
XRCC1-201ENST00000262887 LAMTOR3Q9UHA4 124 aa10.3□□□□□ -0.76
XRCC1-201ENST00000262887 SNURFQ9Y675 71 aa10.3□□□□□ -0.76
XRCC1-201ENST00000262887 TRAV10A0A0B4J240 114 aa10.29□□□□□ -0.76
XRCC1-201ENST00000262887 RMI2Q96E14 147 aa10.29□□□□□ -0.76
XRCC1-201ENST00000262887 CCL24O00175 119 aa10.29□□□□□ -0.76
XRCC1-201ENST00000262887 COX17Q14061 63 aa10.29□□□□□ -0.76
XRCC1-201ENST00000262887 Q6ZVQ6 151 aa10.29□□□□□ -0.76
XRCC1-201ENST00000262887 M0R2N4 97 aa10.28□□□□□ -0.76
XRCC1-201ENST00000262887 C6orf223Q8N319 242 aa10.28□□□□□ -0.76
XRCC1-201ENST00000262887 DEFB130BP0DP73 79 aa10.27□□□□□ -0.77
XRCC1-201ENST00000262887 DEFB130AP0DP74 79 aa10.27□□□□□ -0.77
XRCC1-201ENST00000262887 ATP5EP56381 51 aaPredicted RBP10.27□□□□□ -0.77
XRCC1-201ENST00000262887 PDZD2O15018 2839 aa10.27□□□□□ -0.77
XRCC1-201ENST00000262887 A0A1B0GUV1 79 aa10.26□□□□□ -0.77
XRCC1-201ENST00000262887 NDUFC1O43677 76 aa10.26□□□□□ -0.77
XRCC1-201ENST00000262887 C9orf116Q5BN46 136 aaPredicted RBP10.26□□□□□ -0.77
XRCC1-201ENST00000262887 CSNK1G2-AS1Q8NCQ2 148 aa10.26□□□□□ -0.77
XRCC1-201ENST00000262887 GYPEP15421 78 aa10.26□□□□□ -0.77
XRCC1-201ENST00000262887 CMC4P56277 68 aaPredicted RBP10.25□□□□□ -0.77
XRCC1-201ENST00000262887 KIAA0087Q14695 138 aa10.25□□□□□ -0.77
XRCC1-201ENST00000262887 JMJD1CQ15652 2540 aa10.25□□□□□ -0.77
XRCC1-201ENST00000262887 CXCL6P80162 114 aa10.25□□□□□ -0.77
XRCC1-201ENST00000262887 Q8NDZ9 215 aa10.25□□□□□ -0.77
XRCC1-201ENST00000262887 TEP1Q99973 2627 aaKnown RBP10.24□□□□□ -0.77
XRCC1-201ENST00000262887 A0A096LPF7 62 aa10.23□□□□□ -0.77
XRCC1-201ENST00000262887 LINC00269Q8N2A0 174 aa10.23□□□□□ -0.77
XRCC1-201ENST00000262887 CR1P17927 2039 aa10.23□□□□□ -0.77
XRCC1-201ENST00000262887 PDE6GP18545 87 aa10.22□□□□□ -0.77
XRCC1-201ENST00000262887 IGLV10-54A0A075B6I4 117 aa10.22□□□□□ -0.77
XRCC1-201ENST00000262887 IGHV4-28A0A0C4DH34 117 aa10.22□□□□□ -0.77
XRCC1-201ENST00000262887 CD164L2Q6UWJ8 174 aa10.22□□□□□ -0.77
XRCC1-201ENST00000262887 Q8N3U1 123 aa10.22□□□□□ -0.77
XRCC1-201ENST00000262887 C9orf66Q5T8R8 295 aa10.21□□□□□ -0.78
XRCC1-201ENST00000262887 C19orf73Q9NVV2 129 aa10.21□□□□□ -0.78
XRCC1-201ENST00000262887 CHCHD10Q8WYQ3 142 aaPredicted RBP10.2□□□□□ -0.78
XRCC1-201ENST00000262887 Q6ZQY7 126 aa10.2□□□□□ -0.78
XRCC1-201ENST00000262887 TM2D3Q9BRN9 247 aa10.2□□□□□ -0.78
XRCC1-201ENST00000262887 MPLKIPQ8TAP9 179 aa10.19□□□□□ -0.78
XRCC1-201ENST00000262887 MUC7Q8TAX7 377 aa10.18□□□□□ -0.78
XRCC1-201ENST00000262887 H3BQ85 93 aa10.18□□□□□ -0.78
XRCC1-201ENST00000262887 SPATA3Q8NHX4 192 aa10.18□□□□□ -0.78
XRCC1-201ENST00000262887 TRBV7-4A0A0J9YYF1 115 aa10.17□□□□□ -0.78
XRCC1-201ENST00000262887 ANGP03950 147 aaKnown RBP10.17□□□□□ -0.78
XRCC1-201ENST00000262887 FAM229BQ4G0N7 80 aa10.17□□□□□ -0.78
XRCC1-201ENST00000262887 SCXQ7RTU7 201 aa10.17□□□□□ -0.78
XRCC1-201ENST00000262887 MIFP14174 115 aa10.16□□□□□ -0.78
XRCC1-201ENST00000262887 IGLV1-51P01701 117 aa10.16□□□□□ -0.78
XRCC1-201ENST00000262887 REG3AQ06141 175 aa10.16□□□□□ -0.78
XRCC1-201ENST00000262887 PRO0255Q9UI72 69 aa10.16□□□□□ -0.78
XRCC1-201ENST00000262887 IGLV6-57P01721 117 aa10.15□□□□□ -0.78
XRCC1-201ENST00000262887 LINC01006Q8NI28 216 aa10.15□□□□□ -0.78
XRCC1-201ENST00000262887 DNAJC9-AS1A6NH13 148 aa10.15□□□□□ -0.78
XRCC1-201ENST00000262887 C10orf25Q5T742 122 aa10.15□□□□□ -0.79
XRCC1-201ENST00000262887 NREPQ16612 68 aa10.14□□□□□ -0.79
XRCC1-201ENST00000262887 UNQ6190/PRO20217Q6UXQ8 127 aa10.14□□□□□ -0.79
XRCC1-201ENST00000262887 LINC00612Q8N6U2 182 aa10.14□□□□□ -0.79
XRCC1-201ENST00000262887 SPAG11BQ08648 103 aa10.13□□□□□ -0.79
XRCC1-201ENST00000262887 PMAIP1Q13794 54 aa10.13□□□□□ -0.79
XRCC1-201ENST00000262887 TMEM254Q8TBM7 123 aa10.12□□□□□ -0.79
XRCC1-201ENST00000262887 BPY2O14599 106 aa10.11□□□□□ -0.79
XRCC1-201ENST00000262887 FN1P02751 2386 aaKnown RBP10.11□□□□□ -0.79
XRCC1-201ENST00000262887 DIRC1Q969H9 104 aa10.11□□□□□ -0.79
XRCC1-201ENST00000262887 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.1□□□□□ -0.79
XRCC1-201ENST00000262887 ANK3Q12955 4377 aaKnown RBP10.1□□□□□ -0.79
XRCC1-201ENST00000262887 CYSRT1A8MQ03 144 aa10.1□□□□□ -0.79
XRCC1-201ENST00000262887 ERC2-IT1O76042 136 aa10.09□□□□□ -0.79
XRCC1-201ENST00000262887 PRR15Q8IV56 129 aa10.09□□□□□ -0.79
XRCC1-201ENST00000262887 ESM1Q9NQ30 184 aa10.09□□□□□ -0.79
XRCC1-201ENST00000262887 HIVEP1P15822 2718 aa10.09□□□□□ -0.79
XRCC1-201ENST00000262887 A0A0J9YWU9 116 aa10.08□□□□□ -0.8
XRCC1-201ENST00000262887 IGHV4-30-4P0DP06 118 aa10.08□□□□□ -0.8
XRCC1-201ENST00000262887 ESRGQ1W209 222 aa10.08□□□□□ -0.8
XRCC1-201ENST00000262887 DEFB113Q30KQ7 82 aa10.08□□□□□ -0.8
XRCC1-201ENST00000262887 COX7BP24311 80 aa10.06□□□□□ -0.8
XRCC1-201ENST00000262887 VWFP04275 2813 aa10.06□□□□□ -0.8
XRCC1-201ENST00000262887 TENM1Q9UKZ4 2725 aa10.06□□□□□ -0.8
XRCC1-201ENST00000262887 X6R8D5 127 aa10.06□□□□□ -0.8
XRCC1-201ENST00000262887 ZNF73O43830 326 aaPredicted RBP10.06□□□□□ -0.8
XRCC1-201ENST00000262887 XAGE1AQ9HD64 81 aa10.06□□□□□ -0.8
XRCC1-201ENST00000262887 Q6ZRU5 148 aa10.05□□□□□ -0.8
XRCC1-201ENST00000262887 Q8N9L7 120 aa10.04□□□□□ -0.8
XRCC1-201ENST00000262887 NBEAL2Q6ZNJ1 2754 aa10.03□□□□□ -0.8
XRCC1-201ENST00000262887 PRYO14603 147 aa10.03□□□□□ -0.8
XRCC1-201ENST00000262887 ELOF1P60002 83 aaKnown RBP10.03□□□□□ -0.8
XRCC1-201ENST00000262887 IGKV4-1P06312 121 aa10.02□□□□□ -0.8
XRCC1-201ENST00000262887 FUSP35637 526 aaKnown RBP eCLIP10.02□□□□□ -0.81
XRCC1-201ENST00000262887 SMR3AQ99954 134 aa10.02□□□□□ -0.81
XRCC1-201ENST00000262887 Q6ZTC4 211 aa10.02□□□□□ -0.81
XRCC1-201ENST00000262887 TRRAPQ9Y4A5 3859 aa10.01□□□□□ -0.81
XRCC1-201ENST00000262887 DEFB4AO15263 64 aa10.01□□□□□ -0.81
XRCC1-201ENST00000262887 OCR1Q9BZK8 76 aa10.01□□□□□ -0.81
XRCC1-201ENST00000262887 LYRM9A8MSI8 78 aa10.01□□□□□ -0.81
XRCC1-201ENST00000262887 C6orf48Q9UBA6 75 aa10.01□□□□□ -0.81
XRCC1-201ENST00000262887 GVQW2A0A096LPI5 108 aaPredicted RBP10□□□□□ -0.81
XRCC1-201ENST00000262887 KLK12Q9UKR0 248 aa10□□□□□ -0.81
XRCC1-201ENST00000262887 HIVEP2P31629 2446 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms