RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 LINC00612Q8N6U2 182 aa12.23□□□□□ -0.45
TRAF4-201ENST00000262395 NDUFC2O95298 119 aa12.22□□□□□ -0.45
TRAF4-201ENST00000262395 KRTAP10-3P60369 221 aa12.22□□□□□ -0.45
TRAF4-201ENST00000262395 UBL5Q9BZL1 73 aa12.22□□□□□ -0.45
TRAF4-201ENST00000262395 ANK3Q12955 4377 aaKnown RBP12.22□□□□□ -0.45
TRAF4-201ENST00000262395 KRTAP1-1Q07627 177 aa12.21□□□□□ -0.45
TRAF4-201ENST00000262395 LINC00575Q6W349 94 aa12.21□□□□□ -0.45
TRAF4-201ENST00000262395 PDZD2O15018 2839 aa12.21□□□□□ -0.45
TRAF4-201ENST00000262395 C16orf95Q9H693 158 aa12.21□□□□□ -0.45
TRAF4-201ENST00000262395 SPAG11BQ08648 103 aa12.2□□□□□ -0.46
TRAF4-201ENST00000262395 COX17Q14061 63 aa12.2□□□□□ -0.46
TRAF4-201ENST00000262395 RBM3P98179 157 aaKnown RBP12.19□□□□□ -0.46
TRAF4-201ENST00000262395 HAMPP81172 84 aa12.19□□□□□ -0.46
TRAF4-201ENST00000262395 SMR3AQ99954 134 aa12.19□□□□□ -0.46
TRAF4-201ENST00000262395 XAGE1AQ9HD64 81 aa12.19□□□□□ -0.46
TRAF4-201ENST00000262395 CYSRT1A8MQ03 144 aa12.18□□□□□ -0.46
TRAF4-201ENST00000262395 Q6ZQY7 126 aa12.18□□□□□ -0.46
TRAF4-201ENST00000262395 CELA1Q9UNI1 258 aa12.17□□□□□ -0.46
TRAF4-201ENST00000262395 KLK12Q9UKR0 248 aa12.17□□□□□ -0.46
TRAF4-201ENST00000262395 Q6ZQT0 140 aa12.17□□□□□ -0.46
TRAF4-201ENST00000262395 IGHV4-28A0A0C4DH34 117 aa12.16□□□□□ -0.46
TRAF4-201ENST00000262395 DAD1P61803 113 aa12.16□□□□□ -0.46
TRAF4-201ENST00000262395 TENM1Q9UKZ4 2725 aa12.15□□□□□ -0.46
TRAF4-201ENST00000262395 NOTCH2Q04721 2471 aa12.15□□□□□ -0.47
TRAF4-201ENST00000262395 SCXQ7RTU7 201 aa12.14□□□□□ -0.47
TRAF4-201ENST00000262395 TRBV10-3A0A0K0K1G6 114 aa12.13□□□□□ -0.47
TRAF4-201ENST00000262395 FAM236DA0A1B0GTK5 79 aa12.13□□□□□ -0.47
TRAF4-201ENST00000262395 FAM236CP0DP71 79 aa12.13□□□□□ -0.47
TRAF4-201ENST00000262395 ATP5EP2Q5VTU8 51 aa12.13□□□□□ -0.47
TRAF4-201ENST00000262395 FASNP49327 2511 aaKnown RBP12.13□□□□□ -0.47
TRAF4-201ENST00000262395 ZNF561-AS1K7EIQ3 104 aa12.12□□□□□ -0.47
TRAF4-201ENST00000262395 LYPD5Q6UWN5 251 aa12.12□□□□□ -0.47
TRAF4-201ENST00000262395 LYRM9A8MSI8 78 aa12.1□□□□□ -0.47
TRAF4-201ENST00000262395 LINC01547P58512 204 aaPredicted RBP12.1□□□□□ -0.47
TRAF4-201ENST00000262395 TRAV10A0A0B4J240 114 aa12.1□□□□□ -0.47
TRAF4-201ENST00000262395 Q6ZVQ6 151 aa12.1□□□□□ -0.47
TRAF4-201ENST00000262395 IGLV6-57P01721 117 aa12.08□□□□□ -0.48
TRAF4-201ENST00000262395 LINC00336Q6ZUF6 198 aa12.08□□□□□ -0.48
TRAF4-201ENST00000262395 HIVEP1P15822 2718 aa12.08□□□□□ -0.48
TRAF4-201ENST00000262395 HIGD2BQ4VC39 106 aa12.08□□□□□ -0.48
TRAF4-201ENST00000262395 UNC79Q9P2D8 2635 aa12.08□□□□□ -0.48
TRAF4-201ENST00000262395 SNURFQ9Y675 71 aa12.08□□□□□ -0.48
TRAF4-201ENST00000262395 C6orf48Q9UBA6 75 aa12.07□□□□□ -0.48
TRAF4-201ENST00000262395 PKD1L1Q8TDX9 2849 aa12.06□□□□□ -0.48
TRAF4-201ENST00000262395 ATRQ13535 2644 aa12.05□□□□□ -0.48
TRAF4-201ENST00000262395 NDUFC2-KCTD14E9PQ53 114 aa12.05□□□□□ -0.48
TRAF4-201ENST00000262395 TRRAPQ9Y4A5 3859 aa12.05□□□□□ -0.48
TRAF4-201ENST00000262395 LOC110117498A0A087WWA1 95 aa12.05□□□□□ -0.48
TRAF4-201ENST00000262395 C1orf43Q9BWL3 253 aa12.04□□□□□ -0.48
TRAF4-201ENST00000262395 HELZ2Q9BYK8 2649 aaKnown RBP12.04□□□□□ -0.48
TRAF4-201ENST00000262395 A0A0J9YWU9 116 aa12.04□□□□□ -0.48
TRAF4-201ENST00000262395 H7BZZ5 65 aa12.04□□□□□ -0.48
TRAF4-201ENST00000262395 IGHV4-30-4P0DP06 118 aa12.04□□□□□ -0.48
TRAF4-201ENST00000262395 MRAPQ8TCY5 172 aa12.04□□□□□ -0.48
TRAF4-201ENST00000262395 DIRC1Q969H9 104 aa12.04□□□□□ -0.48
TRAF4-201ENST00000262395 MUC7Q8TAX7 377 aa12.03□□□□□ -0.48
TRAF4-201ENST00000262395 LELP1Q5T871 98 aa12.02□□□□□ -0.48
TRAF4-201ENST00000262395 ZNF73O43830 326 aaPredicted RBP12.02□□□□□ -0.49
TRAF4-201ENST00000262395 Q8NAQ8 132 aa12.01□□□□□ -0.49
TRAF4-201ENST00000262395 RMI2Q96E14 147 aa12.01□□□□□ -0.49
TRAF4-201ENST00000262395 PKIGQ9Y2B9 76 aa12.01□□□□□ -0.49
TRAF4-201ENST00000262395 SERP1Q9Y6X1 66 aa12.01□□□□□ -0.49
TRAF4-201ENST00000262395 TEP1Q99973 2627 aaKnown RBP12□□□□□ -0.49
TRAF4-201ENST00000262395 KMT2BQ9UMN6 2715 aaPredicted RBP12□□□□□ -0.49
TRAF4-201ENST00000262395 COX7BP24311 80 aa12□□□□□ -0.49
TRAF4-201ENST00000262395 PRO0628Q9UI54 55 aa11.99□□□□□ -0.49
TRAF4-201ENST00000262395 PRR34Q9NV39 138 aa11.98□□□□□ -0.49
TRAF4-201ENST00000262395 TRAV7A0A075B6U4 112 aa11.98□□□□□ -0.49
TRAF4-201ENST00000262395 SPART-AS1P0CW21 52 aa11.98□□□□□ -0.49
TRAF4-201ENST00000262395 APOC4P55056 127 aa11.98□□□□□ -0.49
TRAF4-201ENST00000262395 Q8N9L7 120 aa11.98□□□□□ -0.49
TRAF4-201ENST00000262395 F8WEM9 126 aa11.97□□□□□ -0.49
TRAF4-201ENST00000262395 CAMK2N2Q96S95 79 aa11.97□□□□□ -0.49
TRAF4-201ENST00000262395 HECTD1Q9ULT8 2610 aa11.97□□□□□ -0.49
TRAF4-201ENST00000262395 OTOGQ6ZRI0 2925 aa11.97□□□□□ -0.49
TRAF4-201ENST00000262395 C9orf66Q5T8R8 295 aa11.97□□□□□ -0.49
TRAF4-201ENST00000262395 WFDC10BQ8IUB3 73 aa11.97□□□□□ -0.49
TRAF4-201ENST00000262395 TM2D3Q9BRN9 247 aa11.96□□□□□ -0.49
TRAF4-201ENST00000262395 LINC00474Q9P2X8 69 aa11.94□□□□□ -0.5
TRAF4-201ENST00000262395 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.94□□□□□ -0.5
TRAF4-201ENST00000262395 Q6ZRU5 148 aa11.93□□□□□ -0.5
TRAF4-201ENST00000262395 TRBV7-4A0A0J9YYF1 115 aa11.93□□□□□ -0.5
TRAF4-201ENST00000262395 ELOF1P60002 83 aaKnown RBP11.93□□□□□ -0.5
TRAF4-201ENST00000262395 FP248Q71RG6 208 aaPredicted RBP11.93□□□□□ -0.5
TRAF4-201ENST00000262395 VPREB1P12018 145 aa11.92□□□□□ -0.5
TRAF4-201ENST00000262395 MIFP14174 115 aa11.92□□□□□ -0.5
TRAF4-201ENST00000262395 GVQW2A0A096LPI5 108 aaPredicted RBP11.91□□□□□ -0.5
TRAF4-201ENST00000262395 PDE6GP18545 87 aa11.91□□□□□ -0.5
TRAF4-201ENST00000262395 DEFB105AQ8NG35 78 aa11.91□□□□□ -0.5
TRAF4-201ENST00000262395 CXCL6P80162 114 aa11.9□□□□□ -0.5
TRAF4-201ENST00000262395 KLKP1Q107X0 134 aa11.9□□□□□ -0.5
TRAF4-201ENST00000262395 RETNQ9HD89 108 aa11.9□□□□□ -0.5
TRAF4-201ENST00000262395 SMIM26A0A096LP01 95 aa11.89□□□□□ -0.51
TRAF4-201ENST00000262395 EPM2AB3EWF7 344 aa11.89□□□□□ -0.51
TRAF4-201ENST00000262395 A0A0U1RQV1 116 aa11.88□□□□□ -0.51
TRAF4-201ENST00000262395 BRK1Q8WUW1 75 aa11.88□□□□□ -0.51
TRAF4-201ENST00000262395 C3orf84H3BNL1 204 aa11.87□□□□□ -0.51
TRAF4-201ENST00000262395 TRBV7-6A0A0J9YX20 115 aa11.87□□□□□ -0.51
TRAF4-201ENST00000262395 M0R378 163 aa11.86□□□□□ -0.51
TRAF4-201ENST00000262395 BPY2O14599 106 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms