RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 MIFP14174 115 aa11.05□□□□□ -0.64
PRPF40B-201ENST00000261897 NANOS2P60321 138 aaKnown RBP11.05□□□□□ -0.64
PRPF40B-201ENST00000261897 HIGD2BQ4VC39 106 aa11.05□□□□□ -0.64
PRPF40B-201ENST00000261897 LINC01006Q8NI28 216 aa11.05□□□□□ -0.64
PRPF40B-201ENST00000261897 ITPR3Q14573 2671 aa11.05□□□□□ -0.64
PRPF40B-201ENST00000261897 NDUFC2-KCTD14E9PQ53 114 aa11.05□□□□□ -0.64
PRPF40B-201ENST00000261897 H7BZZ5 65 aa11.05□□□□□ -0.64
PRPF40B-201ENST00000261897 NREPQ16612 68 aa11.04□□□□□ -0.64
PRPF40B-201ENST00000261897 SPATA3Q8NHX4 192 aa11.03□□□□□ -0.64
PRPF40B-201ENST00000261897 REG3AQ06141 175 aa11.02□□□□□ -0.64
PRPF40B-201ENST00000261897 ZNF561-AS1K7EIQ3 104 aa11.02□□□□□ -0.65
PRPF40B-201ENST00000261897 C1orf195Q5TG92 126 aa11.02□□□□□ -0.65
PRPF40B-201ENST00000261897 C4orf3Q8WVX3 66 aa11.02□□□□□ -0.65
PRPF40B-201ENST00000261897 BPY2O14599 106 aa11.01□□□□□ -0.65
PRPF40B-201ENST00000261897 C10orf25Q5T742 122 aa11.01□□□□□ -0.65
PRPF40B-201ENST00000261897 TRBV10-3A0A0K0K1G6 114 aa11□□□□□ -0.65
PRPF40B-201ENST00000261897 DIRC1Q969H9 104 aa11□□□□□ -0.65
PRPF40B-201ENST00000261897 FUSP35637 526 aaKnown RBP eCLIP10.99□□□□□ -0.65
PRPF40B-201ENST00000261897 FAM30AQ9NZY2 134 aa10.99□□□□□ -0.65
PRPF40B-201ENST00000261897 LINC00575Q6W349 94 aa10.99□□□□□ -0.65
PRPF40B-201ENST00000261897 Q6YL49 198 aa10.99□□□□□ -0.65
PRPF40B-201ENST00000261897 A0A096LNT2 108 aa10.98□□□□□ -0.65
PRPF40B-201ENST00000261897 DEFB135Q30KP9 77 aa10.98□□□□□ -0.65
PRPF40B-201ENST00000261897 TMEM254Q8TBM7 123 aa10.98□□□□□ -0.65
PRPF40B-201ENST00000261897 ATRQ13535 2644 aa10.98□□□□□ -0.65
PRPF40B-201ENST00000261897 Q6ZQT0 140 aa10.98□□□□□ -0.65
PRPF40B-201ENST00000261897 Q8IZM0 81 aa10.98□□□□□ -0.65
PRPF40B-201ENST00000261897 LINC00482Q8N8I6 264 aa10.98□□□□□ -0.65
PRPF40B-201ENST00000261897 V9GYY9 64 aa10.97□□□□□ -0.65
PRPF40B-201ENST00000261897 CYSRT1A8MQ03 144 aa10.97□□□□□ -0.65
PRPF40B-201ENST00000261897 BAHCC1Q9P281 2608 aa10.97□□□□□ -0.65
PRPF40B-201ENST00000261897 PSPHP1O15172 72 aa10.96□□□□□ -0.65
PRPF40B-201ENST00000261897 MUC7Q8TAX7 377 aa10.96□□□□□ -0.65
PRPF40B-201ENST00000261897 HIGD2AQ9BW72 106 aa10.95□□□□□ -0.66
PRPF40B-201ENST00000261897 COX7BP24311 80 aa10.95□□□□□ -0.66
PRPF40B-201ENST00000261897 LYPD5Q6UWN5 251 aa10.95□□□□□ -0.66
PRPF40B-201ENST00000261897 UBR5O95071 2799 aaPredicted RBP10.94□□□□□ -0.66
PRPF40B-201ENST00000261897 OBSCN-AS1Q96MR7 158 aa10.94□□□□□ -0.66
PRPF40B-201ENST00000261897 PRO0255Q9UI72 69 aa10.93□□□□□ -0.66
PRPF40B-201ENST00000261897 TEP1Q99973 2627 aaKnown RBP10.93□□□□□ -0.66
PRPF40B-201ENST00000261897 CAMK2N2Q96S95 79 aa10.93□□□□□ -0.66
PRPF40B-201ENST00000261897 CD164L2Q6UWJ8 174 aa10.92□□□□□ -0.66
PRPF40B-201ENST00000261897 Q8NDZ9 215 aa10.91□□□□□ -0.66
PRPF40B-201ENST00000261897 WIPF1O43516 503 aa10.91□□□□□ -0.66
PRPF40B-201ENST00000261897 FP248Q71RG6 208 aaPredicted RBP10.91□□□□□ -0.66
PRPF40B-201ENST00000261897 ZNF73O43830 326 aaPredicted RBP10.9□□□□□ -0.67
PRPF40B-201ENST00000261897 IGSF10Q6WRI0 2623 aa10.9□□□□□ -0.67
PRPF40B-201ENST00000261897 DSCR9P59020 149 aa10.89□□□□□ -0.67
PRPF40B-201ENST00000261897 FAM19A3Q7Z5A8 133 aa10.89□□□□□ -0.67
PRPF40B-201ENST00000261897 KRTAP10-9P60411 292 aa10.89□□□□□ -0.67
PRPF40B-201ENST00000261897 IGHV4-31P0DP07 118 aa10.89□□□□□ -0.67
PRPF40B-201ENST00000261897 PRYO14603 147 aa10.87□□□□□ -0.67
PRPF40B-201ENST00000261897 FAM229BQ4G0N7 80 aa10.87□□□□□ -0.67
PRPF40B-201ENST00000261897 DNAJC9-AS1A6NH13 148 aa10.87□□□□□ -0.67
PRPF40B-201ENST00000261897 DEFB116Q30KQ4 102 aa10.87□□□□□ -0.67
PRPF40B-201ENST00000261897 FASNP49327 2511 aaKnown RBP10.86□□□□□ -0.67
PRPF40B-201ENST00000261897 LY6G6DO95868 133 aa10.86□□□□□ -0.67
PRPF40B-201ENST00000261897 HIVEP1P15822 2718 aa10.85□□□□□ -0.67
PRPF40B-201ENST00000261897 GIG44P09565 113 aaPredicted RBP10.84□□□□□ -0.67
PRPF40B-201ENST00000261897 PDE6GP18545 87 aa10.84□□□□□ -0.67
PRPF40B-201ENST00000261897 KLKP1Q107X0 134 aa10.84□□□□□ -0.67
PRPF40B-201ENST00000261897 NKAPP1Q8N9T2 125 aa10.84□□□□□ -0.67
PRPF40B-201ENST00000261897 SEC61GP60059 68 aa10.84□□□□□ -0.67
PRPF40B-201ENST00000261897 SPTSSBQ8NFR3 76 aa10.83□□□□□ -0.68
PRPF40B-201ENST00000261897 NDUFC1O43677 76 aa10.83□□□□□ -0.68
PRPF40B-201ENST00000261897 PLAC8L1A1L4L8 177 aa10.82□□□□□ -0.68
PRPF40B-201ENST00000261897 ESRGQ1W209 222 aa10.82□□□□□ -0.68
PRPF40B-201ENST00000261897 HECTD1Q9ULT8 2610 aa10.82□□□□□ -0.68
PRPF40B-201ENST00000261897 RPL37AP8A6NKH3 93 aa10.81□□□□□ -0.68
PRPF40B-201ENST00000261897 IGKV2D-24A0A075B6R9 120 aa10.81□□□□□ -0.68
PRPF40B-201ENST00000261897 SMIM29Q86T20 159 aa10.81□□□□□ -0.68
PRPF40B-201ENST00000261897 COX17Q14061 63 aa10.79□□□□□ -0.68
PRPF40B-201ENST00000261897 KIAA0087Q14695 138 aa10.79□□□□□ -0.68
PRPF40B-201ENST00000261897 WFDC13Q8IUB5 93 aa10.79□□□□□ -0.68
PRPF40B-201ENST00000261897 CMC4P56277 68 aaPredicted RBP10.78□□□□□ -0.68
PRPF40B-201ENST00000261897 CXCL6P80162 114 aa10.78□□□□□ -0.68
PRPF40B-201ENST00000261897 A0A0J9YWU9 116 aa10.77□□□□□ -0.68
PRPF40B-201ENST00000261897 IL17DQ8TAD2 202 aa10.77□□□□□ -0.69
PRPF40B-201ENST00000261897 WFDC10BQ8IUB3 73 aa10.76□□□□□ -0.69
PRPF40B-201ENST00000261897 LOC110117498A0A087WWA1 95 aa10.76□□□□□ -0.69
PRPF40B-201ENST00000261897 A0A1B0GUV1 79 aa10.75□□□□□ -0.69
PRPF40B-201ENST00000261897 UBE2BP63146 152 aa10.75□□□□□ -0.69
PRPF40B-201ENST00000261897 NOTCH1P46531 2555 aa10.74□□□□□ -0.69
PRPF40B-201ENST00000261897 C6orf48Q9UBA6 75 aa10.73□□□□□ -0.69
PRPF40B-201ENST00000261897 NBEAL1Q6ZS30 2694 aa10.73□□□□□ -0.69
PRPF40B-201ENST00000261897 A0A0G2JQZ4 141 aa10.72□□□□□ -0.69
PRPF40B-201ENST00000261897 A0A1W2PNN7 141 aa10.72□□□□□ -0.69
PRPF40B-201ENST00000261897 LINC00167Q96N53 147 aa10.72□□□□□ -0.69
PRPF40B-201ENST00000261897 A0A096LNI7 61 aa10.72□□□□□ -0.69
PRPF40B-201ENST00000261897 TRBV7-4A0A0J9YYF1 115 aa10.72□□□□□ -0.69
PRPF40B-201ENST00000261897 ATP5EP56381 51 aaPredicted RBP10.71□□□□□ -0.69
PRPF40B-201ENST00000261897 PDZD2O15018 2839 aa10.71□□□□□ -0.7
PRPF40B-201ENST00000261897 ETDCA0A1B0GVM5 59 aa10.7□□□□□ -0.7
PRPF40B-201ENST00000261897 DEFB113Q30KQ7 82 aa10.7□□□□□ -0.7
PRPF40B-201ENST00000261897 IGLV1-51P01701 117 aa10.7□□□□□ -0.7
PRPF40B-201ENST00000261897 COL6A5A8TX70 2615 aa10.69□□□□□ -0.7
PRPF40B-201ENST00000261897 PMAIP1Q13794 54 aa10.69□□□□□ -0.7
PRPF40B-201ENST00000261897 Q6ZRU5 148 aa10.69□□□□□ -0.7
PRPF40B-201ENST00000261897 C16orf95Q9H693 158 aa10.68□□□□□ -0.7
PRPF40B-201ENST00000261897 ITPR2Q14571 2701 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms