RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 HIST1H2BHQ93079 126 aa5.29□□□□□ -1.56
TMEM258-201ENST00000257262 HIST1H2BNQ99877 126 aa5.29□□□□□ -1.56
TMEM258-201ENST00000257262 HIST1H2BMQ99879 126 aa5.29□□□□□ -1.56
TMEM258-201ENST00000257262 TMEM223A0PJW6 202 aa5.28□□□□□ -1.56
TMEM258-201ENST00000257262 KRTAP29-1A8MX34 341 aaPredicted RBP5.28□□□□□ -1.56
TMEM258-201ENST00000257262 XAGE1AQ9HD64 81 aa5.28□□□□□ -1.56
TMEM258-201ENST00000257262 DMBT1Q9UGM3 2413 aaPredicted RBP5.28□□□□□ -1.56
TMEM258-201ENST00000257262 KRTAP11-1Q8IUC1 163 aa5.27□□□□□ -1.57
TMEM258-201ENST00000257262 ZNF625Q96I27 306 aaPredicted RBP5.27□□□□□ -1.57
TMEM258-201ENST00000257262 PSORS1C2Q9UIG4 136 aa5.27□□□□□ -1.57
TMEM258-201ENST00000257262 HSPB8Q9UJY1 196 aa5.27□□□□□ -1.57
TMEM258-201ENST00000257262 M0QXV9 152 aa5.26□□□□□ -1.57
TMEM258-201ENST00000257262 PFN2P35080 140 aa5.26□□□□□ -1.57
TMEM258-201ENST00000257262 SERTAD4-AS1Q5TG53 156 aa5.26□□□□□ -1.57
TMEM258-201ENST00000257262 OXTP01178 125 aa5.25□□□□□ -1.57
TMEM258-201ENST00000257262 S100A1P23297 94 aa5.25□□□□□ -1.57
TMEM258-201ENST00000257262 PCP4P48539 62 aa5.25□□□□□ -1.57
TMEM258-201ENST00000257262 SRSF9Q13242 221 aaKnown RBP eCLIP5.25□□□□□ -1.57
TMEM258-201ENST00000257262 C1orf137Q5JT78 98 aa5.25□□□□□ -1.57
TMEM258-201ENST00000257262 ERG28Q9UKR5 140 aa5.25□□□□□ -1.57
TMEM258-201ENST00000257262 C22orf24Q9Y442 160 aa5.25□□□□□ -1.57
TMEM258-201ENST00000257262 FLG2Q5D862 2391 aaPredicted RBP5.24□□□□□ -1.57
TMEM258-201ENST00000257262 MYCBP2O75592 4640 aa5.24□□□□□ -1.57
TMEM258-201ENST00000257262 B5MCH6 92 aa5.24□□□□□ -1.57
TMEM258-201ENST00000257262 UBE2BP63146 152 aa5.24□□□□□ -1.57
TMEM258-201ENST00000257262 SPINK6Q6UWN8 80 aa5.24□□□□□ -1.57
TMEM258-201ENST00000257262 PMCHL2Q9BQD1 86 aa5.24□□□□□ -1.57
TMEM258-201ENST00000257262 MAP1LC3CQ9BXW4 147 aa5.24□□□□□ -1.57
TMEM258-201ENST00000257262 C9orf118A6NHY6 69 aa5.23□□□□□ -1.57
TMEM258-201ENST00000257262 ATP6V1G1O75348 118 aa5.23□□□□□ -1.57
TMEM258-201ENST00000257262 DPM2O94777 84 aa5.23□□□□□ -1.57
TMEM258-201ENST00000257262 IGKCP01834 107 aa5.23□□□□□ -1.57
TMEM258-201ENST00000257262 PLNP26678 52 aa5.23□□□□□ -1.57
TMEM258-201ENST00000257262 COX17Q14061 63 aa5.23□□□□□ -1.57
TMEM258-201ENST00000257262 SFTA2Q6UW10 78 aa5.23□□□□□ -1.57
TMEM258-201ENST00000257262 A0A0U1RRA0 63 aa5.22□□□□□ -1.57
TMEM258-201ENST00000257262 SYS1-DBNDD2H3BUS1 97 aa5.22□□□□□ -1.57
TMEM258-201ENST00000257262 IGLV7-43P04211 117 aa5.22□□□□□ -1.57
TMEM258-201ENST00000257262 LBHQ53QV2 105 aaPredicted RBP5.22□□□□□ -1.57
TMEM258-201ENST00000257262 MRPL55Q7Z7F7 128 aaKnown RBP5.22□□□□□ -1.57
TMEM258-201ENST00000257262 LEPROTO15243 131 aa5.21□□□□□ -1.58
TMEM258-201ENST00000257262 LINC00158P58513 81 aa5.21□□□□□ -1.58
TMEM258-201ENST00000257262 COA6Q5JTJ3 125 aaKnown RBP5.21□□□□□ -1.58
TMEM258-201ENST00000257262 LINC00167Q96N53 147 aa5.21□□□□□ -1.58
TMEM258-201ENST00000257262 SND1-IT1Q9HBX3 110 aa5.21□□□□□ -1.58
TMEM258-201ENST00000257262 TP73-AS1Q9UF72 201 aa5.21□□□□□ -1.58
TMEM258-201ENST00000257262 LRP1Q07954 4544 aaKnown RBP5.21□□□□□ -1.58
TMEM258-201ENST00000257262 PKHD1L1Q86WI1 4243 aa5.21□□□□□ -1.58
TMEM258-201ENST00000257262 IGLV5-37A0A075B6J1 123 aa5.2□□□□□ -1.58
TMEM258-201ENST00000257262 RPL37AP8A6NKH3 93 aa5.2□□□□□ -1.58
TMEM258-201ENST00000257262 SMIM13P0DJ93 91 aa5.2□□□□□ -1.58
TMEM258-201ENST00000257262 TSPEAR-AS2P59090 65 aa5.2□□□□□ -1.58
TMEM258-201ENST00000257262 HERV-K104P63124 156 aa5.2□□□□□ -1.58
TMEM258-201ENST00000257262 NKAPP1Q8N9T2 125 aa5.2□□□□□ -1.58
TMEM258-201ENST00000257262 NDUFA12Q9UI09 145 aa5.2□□□□□ -1.58
TMEM258-201ENST00000257262 MYMXA0A1B0GTQ4 84 aa5.19□□□□□ -1.58
TMEM258-201ENST00000257262 J3QQQ9 107 aa5.19□□□□□ -1.58
TMEM258-201ENST00000257262 C3orf79P0CE67 100 aa5.19□□□□□ -1.58
TMEM258-201ENST00000257262 VPREB1P12018 145 aa5.19□□□□□ -1.58
TMEM258-201ENST00000257262 HERVK_113P61574 105 aa5.19□□□□□ -1.58
TMEM258-201ENST00000257262 MEIG1Q5JSS6 88 aa5.19□□□□□ -1.58
TMEM258-201ENST00000257262 REG3GQ6UW15 175 aa5.19□□□□□ -1.58
TMEM258-201ENST00000257262 Q8NDZ9 215 aa5.19□□□□□ -1.58
TMEM258-201ENST00000257262 PLEKHB2Q96CS7 222 aa5.19□□□□□ -1.58
TMEM258-201ENST00000257262 LINC01600Q96MT4 127 aa5.19□□□□□ -1.58
TMEM258-201ENST00000257262 MT1HL1P0DM35 61 aa5.18□□□□□ -1.58
TMEM258-201ENST00000257262 RPL24P83731 157 aaKnown RBP5.18□□□□□ -1.58
TMEM258-201ENST00000257262 LINC01545Q5VT33 79 aa5.18□□□□□ -1.58
TMEM258-201ENST00000257262 FAT3Q8TDW7 4589 aa5.18□□□□□ -1.58
TMEM258-201ENST00000257262 LINC00587B1AMM8 73 aa5.17□□□□□ -1.58
TMEM258-201ENST00000257262 E9PLD3 99 aa5.17□□□□□ -1.58
TMEM258-201ENST00000257262 LGALS3P17931 250 aaKnown RBP5.17□□□□□ -1.58
TMEM258-201ENST00000257262 KRTDAPP60985 99 aa5.17□□□□□ -1.58
TMEM258-201ENST00000257262 MIR7-3HGQ8N6C7 128 aa5.17□□□□□ -1.58
TMEM258-201ENST00000257262 IGLV1-50A0A075B6I6 118 aa5.16□□□□□ -1.58
TMEM258-201ENST00000257262 IGKV2-28A0A075B6P5 120 aa5.16□□□□□ -1.58
TMEM258-201ENST00000257262 A4D1N5 150 aa5.16□□□□□ -1.58
TMEM258-201ENST00000257262 H0Y9J4 135 aa5.16□□□□□ -1.58
TMEM258-201ENST00000257262 IGKV2D-28P01615 120 aa5.16□□□□□ -1.58
TMEM258-201ENST00000257262 NMUP48645 174 aa5.16□□□□□ -1.58
TMEM258-201ENST00000257262 KRTAP10-8P60410 259 aa5.16□□□□□ -1.58
TMEM258-201ENST00000257262 DIRC1Q969H9 104 aa5.16□□□□□ -1.58
TMEM258-201ENST00000257262 ZNF861PO60384 105 aa5.15□□□□□ -1.59
TMEM258-201ENST00000257262 BCE1O60756 84 aa5.15□□□□□ -1.59
TMEM258-201ENST00000257262 DAND5Q8N907 189 aa5.15□□□□□ -1.59
TMEM258-201ENST00000257262 M0R378 163 aa5.14□□□□□ -1.59
TMEM258-201ENST00000257262 BOD1L2Q8IYS8 172 aa5.14□□□□□ -1.59
TMEM258-201ENST00000257262 HIST3H2BBQ8N257 126 aa5.14□□□□□ -1.59
TMEM258-201ENST00000257262 IGKV2D-26A0A0A0MRZ7 120 aa5.13□□□□□ -1.59
TMEM258-201ENST00000257262 A0A0J9YXY3 114 aa5.13□□□□□ -1.59
TMEM258-201ENST00000257262 TMEM238C9JI98 176 aa5.13□□□□□ -1.59
TMEM258-201ENST00000257262 RPL28P46779 137 aaKnown RBP5.13□□□□□ -1.59
TMEM258-201ENST00000257262 ADAMTSL4-AS1Q5T5F5 129 aa5.13□□□□□ -1.59
TMEM258-201ENST00000257262 KRTAP3-1Q9BYR8 98 aa5.13□□□□□ -1.59
TMEM258-201ENST00000257262 TMEM126AQ9H061 195 aa5.13□□□□□ -1.59
TMEM258-201ENST00000257262 LOC107984156A0A0G2JMH3 177 aa5.12□□□□□ -1.59
TMEM258-201ENST00000257262 C20orf202A1L168 122 aa5.12□□□□□ -1.59
TMEM258-201ENST00000257262 NCR3O14931 201 aa5.12□□□□□ -1.59
TMEM258-201ENST00000257262 S100A6P06703 90 aa5.12□□□□□ -1.59
TMEM258-201ENST00000257262 KRTAP1-4P0C5Y4 121 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms