RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 X6R8D5 127 aa13.31□□□□□ -0.28
PPFIA1-201ENST00000253925 UNC80Q8N2C7 3258 aa13.31□□□□□ -0.28
PPFIA1-201ENST00000253925 ZNF575Q86XF7 245 aa13.3□□□□□ -0.28
PPFIA1-201ENST00000253925 C1orf137Q5JT78 98 aa13.29□□□□□ -0.28
PPFIA1-201ENST00000253925 LINC00208Q96KT6 92 aa13.29□□□□□ -0.28
PPFIA1-201ENST00000253925 Q6ZRU5 148 aa13.29□□□□□ -0.28
PPFIA1-201ENST00000253925 CFAP54Q96N23 3096 aa13.28□□□□□ -0.28
PPFIA1-201ENST00000253925 FASNP49327 2511 aaKnown RBP13.27□□□□□ -0.28
PPFIA1-201ENST00000253925 A0A096LNT2 108 aa13.25□□□□□ -0.29
PPFIA1-201ENST00000253925 Q8N9L7 120 aa13.23□□□□□ -0.29
PPFIA1-201ENST00000253925 SMCR5Q8TEV8 140 aa13.23□□□□□ -0.29
PPFIA1-201ENST00000253925 EIF4EBP3O60516 100 aaPredicted RBP13.21□□□□□ -0.29
PPFIA1-201ENST00000253925 CXCL6P80162 114 aa13.21□□□□□ -0.29
PPFIA1-201ENST00000253925 REG3GQ6UW15 175 aa13.21□□□□□ -0.29
PPFIA1-201ENST00000253925 PRUNE2Q8WUY3 3088 aa13.21□□□□□ -0.3
PPFIA1-201ENST00000253925 C6orf48Q9UBA6 75 aa13.2□□□□□ -0.3
PPFIA1-201ENST00000253925 C10orf25Q5T742 122 aa13.2□□□□□ -0.3
PPFIA1-201ENST00000253925 CASC2Q6XLA1 102 aa13.19□□□□□ -0.3
PPFIA1-201ENST00000253925 LINC00474Q9P2X8 69 aa13.18□□□□□ -0.3
PPFIA1-201ENST00000253925 CSNK1G2-AS1Q8NCQ2 148 aa13.17□□□□□ -0.3
PPFIA1-201ENST00000253925 PLAC8L1A1L4L8 177 aa13.17□□□□□ -0.3
PPFIA1-201ENST00000253925 SPATA3Q8NHX4 192 aa13.16□□□□□ -0.3
PPFIA1-201ENST00000253925 LINC01556Q5JQF7 62 aa13.16□□□□□ -0.3
PPFIA1-201ENST00000253925 H3BNG1 76 aa13.16□□□□□ -0.3
PPFIA1-201ENST00000253925 C4orf48Q5BLP8 95 aa13.16□□□□□ -0.3
PPFIA1-201ENST00000253925 TRIOO75962 3097 aa13.15□□□□□ -0.3
PPFIA1-201ENST00000253925 ZNF706Q9Y5V0 76 aaPredicted RBP13.15□□□□□ -0.31
PPFIA1-201ENST00000253925 BCE1O60756 84 aa13.13□□□□□ -0.31
PPFIA1-201ENST00000253925 Q8NAQ8 132 aa13.13□□□□□ -0.31
PPFIA1-201ENST00000253925 Q6ZQT0 140 aa13.11□□□□□ -0.31
PPFIA1-201ENST00000253925 MGAQ8IWI9 3026 aa13.11□□□□□ -0.31
PPFIA1-201ENST00000253925 ELOF1P60002 83 aaKnown RBP13.11□□□□□ -0.31
PPFIA1-201ENST00000253925 LOC110117498A0A087WWA1 95 aa13.1□□□□□ -0.31
PPFIA1-201ENST00000253925 C7orf33Q8WU49 177 aa13.1□□□□□ -0.31
PPFIA1-201ENST00000253925 CDH23Q9H251 3354 aa13.1□□□□□ -0.31
PPFIA1-201ENST00000253925 GIG44P09565 113 aaPredicted RBP13.09□□□□□ -0.31
PPFIA1-201ENST00000253925 ZNF292O60281 2723 aa13.08□□□□□ -0.32
PPFIA1-201ENST00000253925 GVQW2A0A096LPI5 108 aaPredicted RBP13.08□□□□□ -0.32
PPFIA1-201ENST00000253925 SMIM29Q86T20 159 aa13.08□□□□□ -0.32
PPFIA1-201ENST00000253925 C22orf24Q9Y442 160 aa13.07□□□□□ -0.32
PPFIA1-201ENST00000253925 PCOTHQ58A44 107 aa13.07□□□□□ -0.32
PPFIA1-201ENST00000253925 C19orf73Q9NVV2 129 aa13.07□□□□□ -0.32
PPFIA1-201ENST00000253925 TM2D3Q9BRN9 247 aa13.06□□□□□ -0.32
PPFIA1-201ENST00000253925 KIAA0087Q14695 138 aa13.06□□□□□ -0.32
PPFIA1-201ENST00000253925 H0Y9P7 68 aa13.06□□□□□ -0.32
PPFIA1-201ENST00000253925 M0R2N4 97 aa13.06□□□□□ -0.32
PPFIA1-201ENST00000253925 DEFB116Q30KQ4 102 aa13.06□□□□□ -0.32
PPFIA1-201ENST00000253925 IGLV9-49A0A0B4J1Y8 123 aa13.05□□□□□ -0.32
PPFIA1-201ENST00000253925 A0A087WSZ3 146 aa13.05□□□□□ -0.32
PPFIA1-201ENST00000253925 Q9BRP9 147 aa13.04□□□□□ -0.32
PPFIA1-201ENST00000253925 HCG22E2RYF7 251 aa13.04□□□□□ -0.32
PPFIA1-201ENST00000253925 SPINK6Q6UWN8 80 aa13.03□□□□□ -0.32
PPFIA1-201ENST00000253925 WDFY4Q6ZS81 3184 aa13.03□□□□□ -0.32
PPFIA1-201ENST00000253925 LINC00336Q6ZUF6 198 aa13.03□□□□□ -0.32
PPFIA1-201ENST00000253925 IGLV6-57P01721 117 aa13.02□□□□□ -0.32
PPFIA1-201ENST00000253925 K7ERS5 55 aa13.02□□□□□ -0.33
PPFIA1-201ENST00000253925 LIMD2Q9BT23 127 aa13.02□□□□□ -0.33
PPFIA1-201ENST00000253925 A0A1B0GW54 56 aa13.02□□□□□ -0.33
PPFIA1-201ENST00000253925 LINC00167Q96N53 147 aa13□□□□□ -0.33
PPFIA1-201ENST00000253925 hDV103S1A0JD37 113 aa13□□□□□ -0.33
PPFIA1-201ENST00000253925 LINC00612Q8N6U2 182 aa13□□□□□ -0.33
PPFIA1-201ENST00000253925 NUPR2A6NF83 97 aa13□□□□□ -0.33
PPFIA1-201ENST00000253925 XIRP2A4UGR9 3374 aa12.99□□□□□ -0.33
PPFIA1-201ENST00000253925 VPS13AQ96RL7 3174 aa12.99□□□□□ -0.33
PPFIA1-201ENST00000253925 PRLHP81277 87 aa12.98□□□□□ -0.33
PPFIA1-201ENST00000253925 VPREB1P12018 145 aa12.96□□□□□ -0.33
PPFIA1-201ENST00000253925 LINC01600Q96MT4 127 aa12.95□□□□□ -0.34
PPFIA1-201ENST00000253925 CENPEQ02224 2701 aa12.95□□□□□ -0.34
PPFIA1-201ENST00000253925 Q6ZRX8 168 aa12.94□□□□□ -0.34
PPFIA1-201ENST00000253925 PRR34Q9NV39 138 aa12.93□□□□□ -0.34
PPFIA1-201ENST00000253925 FLNAP21333 2647 aaKnown RBP12.93□□□□□ -0.34
PPFIA1-201ENST00000253925 C1orf64Q8NEQ6 169 aa12.92□□□□□ -0.34
PPFIA1-201ENST00000253925 Q8NBF4 154 aa12.91□□□□□ -0.34
PPFIA1-201ENST00000253925 F8P00451 2351 aa12.91□□□□□ -0.34
PPFIA1-201ENST00000253925 Q6ZRP5 223 aa12.9□□□□□ -0.34
PPFIA1-201ENST00000253925 FAM104AQ969W3 186 aa12.9□□□□□ -0.34
PPFIA1-201ENST00000253925 KRTAP1-3Q8IUG1 177 aa12.88□□□□□ -0.35
PPFIA1-201ENST00000253925 IGHV6-1A0A0B4J1U7 121 aa12.87□□□□□ -0.35
PPFIA1-201ENST00000253925 HECTD1Q9ULT8 2610 aa12.87□□□□□ -0.35
PPFIA1-201ENST00000253925 LAMA1P25391 3075 aa12.86□□□□□ -0.35
PPFIA1-201ENST00000253925 DNAH10OSP0CZ25 163 aa12.85□□□□□ -0.35
PPFIA1-201ENST00000253925 LINC00528Q8N1L1 170 aa12.84□□□□□ -0.35
PPFIA1-201ENST00000253925 KLKP1Q107X0 134 aa12.84□□□□□ -0.35
PPFIA1-201ENST00000253925 LINC00588Q9Y4M8 146 aa12.84□□□□□ -0.35
PPFIA1-201ENST00000253925 KRTAP24-1Q3LI83 254 aa12.83□□□□□ -0.36
PPFIA1-201ENST00000253925 H7BZZ5 65 aa12.83□□□□□ -0.36
PPFIA1-201ENST00000253925 ITPR3Q14573 2671 aa12.83□□□□□ -0.36
PPFIA1-201ENST00000253925 LY6G6CO95867 125 aa12.82□□□□□ -0.36
PPFIA1-201ENST00000253925 KRTAP10-3P60369 221 aa12.82□□□□□ -0.36
PPFIA1-201ENST00000253925 SZT2Q5T011 3432 aa12.81□□□□□ -0.36
PPFIA1-201ENST00000253925 A8MUN3 132 aa12.81□□□□□ -0.36
PPFIA1-201ENST00000253925 SPAG11AQ6PDA7 123 aa12.81□□□□□ -0.36
PPFIA1-201ENST00000253925 LINC00476Q8WZB0 136 aa12.81□□□□□ -0.36
PPFIA1-201ENST00000253925 KCNQ1DNQ9H478 68 aa12.8□□□□□ -0.36
PPFIA1-201ENST00000253925 ST20-AS1Q8NBB2 130 aa12.8□□□□□ -0.36
PPFIA1-201ENST00000253925 SERTAD4-AS1Q5TG53 156 aa12.8□□□□□ -0.36
PPFIA1-201ENST00000253925 AKAP13Q12802 2813 aa12.79□□□□□ -0.36
PPFIA1-201ENST00000253925 C9orf129Q5T035 196 aaKnown RBP12.79□□□□□ -0.36
PPFIA1-201ENST00000253925 DSPP15924 2871 aaKnown RBP12.79□□□□□ -0.36
PPFIA1-201ENST00000253925 FLNBO75369 2602 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms