RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 SLPIP03973 132 aa11.7□□□□□ -0.54
FOXA1-201ENST00000250448 DPH3Q96FX2 82 aa11.7□□□□□ -0.54
FOXA1-201ENST00000250448 DSCR8Q96T75 97 aa11.7□□□□□ -0.54
FOXA1-201ENST00000250448 IGKV3D-7A0A0C4DH55 119 aa11.69□□□□□ -0.54
FOXA1-201ENST00000250448 TENM3Q9P273 2699 aa11.69□□□□□ -0.54
FOXA1-201ENST00000250448 RETNQ9HD89 108 aa11.69□□□□□ -0.54
FOXA1-201ENST00000250448 ORMDL1Q9P0S3 153 aa11.69□□□□□ -0.54
FOXA1-201ENST00000250448 XCL1P47992 114 aa11.68□□□□□ -0.54
FOXA1-201ENST00000250448 RPL18AQ02543 176 aaKnown RBP11.68□□□□□ -0.54
FOXA1-201ENST00000250448 IGHV4-28A0A0C4DH34 117 aa11.67□□□□□ -0.54
FOXA1-201ENST00000250448 EGFEM1PQ0D2K5 195 aa11.67□□□□□ -0.54
FOXA1-201ENST00000250448 Q8IZM0 81 aa11.66□□□□□ -0.54
FOXA1-201ENST00000250448 SS18Q15532 418 aa11.66□□□□□ -0.54
FOXA1-201ENST00000250448 A0A0U1RQV1 116 aa11.65□□□□□ -0.54
FOXA1-201ENST00000250448 CRYGAP11844 174 aa11.65□□□□□ -0.54
FOXA1-201ENST00000250448 C1orf195Q5TG92 126 aa11.65□□□□□ -0.54
FOXA1-201ENST00000250448 CYSTM1Q9H1C7 97 aa11.65□□□□□ -0.54
FOXA1-201ENST00000250448 GYPEP15421 78 aa11.64□□□□□ -0.55
FOXA1-201ENST00000250448 LINC00167Q96N53 147 aa11.64□□□□□ -0.55
FOXA1-201ENST00000250448 CELA1Q9UNI1 258 aa11.64□□□□□ -0.55
FOXA1-201ENST00000250448 CLPSL2Q6UWE3 100 aa11.63□□□□□ -0.55
FOXA1-201ENST00000250448 hADV29S1A0JD25 119 aa11.63□□□□□ -0.55
FOXA1-201ENST00000250448 DNAH3Q8TD57 4116 aa11.63□□□□□ -0.55
FOXA1-201ENST00000250448 A0A087WVE0 104 aa11.62□□□□□ -0.55
FOXA1-201ENST00000250448 A0A1B0GUV1 79 aa11.62□□□□□ -0.55
FOXA1-201ENST00000250448 Q8NAQ8 132 aa11.62□□□□□ -0.55
FOXA1-201ENST00000250448 CCKP06307 115 aa11.62□□□□□ -0.55
FOXA1-201ENST00000250448 NANOS2P60321 138 aaKnown RBP11.62□□□□□ -0.55
FOXA1-201ENST00000250448 LINC01561Q8N1V8 128 aa11.62□□□□□ -0.55
FOXA1-201ENST00000250448 LINC00612Q8N6U2 182 aa11.61□□□□□ -0.55
FOXA1-201ENST00000250448 PRR3P79522 188 aaKnown RBP11.6□□□□□ -0.55
FOXA1-201ENST00000250448 Q8N814 137 aa11.6□□□□□ -0.55
FOXA1-201ENST00000250448 JMJD7-PLA2G4BH0Y9G9 81 aa11.59□□□□□ -0.55
FOXA1-201ENST00000250448 SERP2Q8N6R1 65 aa11.59□□□□□ -0.55
FOXA1-201ENST00000250448 NDUFC2O95298 119 aa11.58□□□□□ -0.56
FOXA1-201ENST00000250448 USP17L23D6RBM5 183 aa11.58□□□□□ -0.56
FOXA1-201ENST00000250448 HTN3P15516 51 aa11.57□□□□□ -0.56
FOXA1-201ENST00000250448 A0A096LPF7 62 aa11.57□□□□□ -0.56
FOXA1-201ENST00000250448 MIFP14174 115 aa11.57□□□□□ -0.56
FOXA1-201ENST00000250448 KIAA0087Q14695 138 aa11.57□□□□□ -0.56
FOXA1-201ENST00000250448 S100A7L2Q5SY68 101 aa11.57□□□□□ -0.56
FOXA1-201ENST00000250448 DAD1P61803 113 aa11.56□□□□□ -0.56
FOXA1-201ENST00000250448 TMEM256-PLSCR3K7ERE1 68 aa11.56□□□□□ -0.56
FOXA1-201ENST00000250448 LYRM9A8MSI8 78 aa11.55□□□□□ -0.56
FOXA1-201ENST00000250448 COX17Q14061 63 aa11.55□□□□□ -0.56
FOXA1-201ENST00000250448 PRO0255Q9UI72 69 aa11.55□□□□□ -0.56
FOXA1-201ENST00000250448 CD164L2Q6UWJ8 174 aa11.54□□□□□ -0.56
FOXA1-201ENST00000250448 UPK3BQ9BT76 320 aa11.54□□□□□ -0.56
FOXA1-201ENST00000250448 ATP5EP2Q5VTU8 51 aa11.54□□□□□ -0.56
FOXA1-201ENST00000250448 LINC00269Q8N2A0 174 aa11.53□□□□□ -0.56
FOXA1-201ENST00000250448 ZNF561-AS1K7EIQ3 104 aa11.53□□□□□ -0.56
FOXA1-201ENST00000250448 CHCHD10Q8WYQ3 142 aaPredicted RBP11.53□□□□□ -0.56
FOXA1-201ENST00000250448 SPART-AS1P0CW21 52 aa11.52□□□□□ -0.57
FOXA1-201ENST00000250448 C9orf116Q5BN46 136 aaPredicted RBP11.52□□□□□ -0.57
FOXA1-201ENST00000250448 C6orf99Q4VX62 202 aa11.51□□□□□ -0.57
FOXA1-201ENST00000250448 IGLV10-54A0A075B6I4 117 aa11.51□□□□□ -0.57
FOXA1-201ENST00000250448 K7EIL1 84 aa11.51□□□□□ -0.57
FOXA1-201ENST00000250448 TMEM258P61165 79 aa11.5□□□□□ -0.57
FOXA1-201ENST00000250448 Q8NDZ9 215 aa11.5□□□□□ -0.57
FOXA1-201ENST00000250448 Q8N3U1 123 aa11.49□□□□□ -0.57
FOXA1-201ENST00000250448 ANGP03950 147 aaKnown RBP11.49□□□□□ -0.57
FOXA1-201ENST00000250448 REG3AQ06141 175 aa11.49□□□□□ -0.57
FOXA1-201ENST00000250448 LYPD5Q6UWN5 251 aa11.48□□□□□ -0.57
FOXA1-201ENST00000250448 A0A0J9YWU9 116 aa11.47□□□□□ -0.57
FOXA1-201ENST00000250448 LINC00575Q6W349 94 aa11.47□□□□□ -0.57
FOXA1-201ENST00000250448 FAM19A1Q7Z5A9 133 aa11.47□□□□□ -0.57
FOXA1-201ENST00000250448 UBL5Q9BZL1 73 aa11.47□□□□□ -0.57
FOXA1-201ENST00000250448 GHRHP01286 108 aa11.46□□□□□ -0.57
FOXA1-201ENST00000250448 ENHOQ6UWT2 76 aa11.46□□□□□ -0.57
FOXA1-201ENST00000250448 BRK1Q8WUW1 75 aa11.46□□□□□ -0.58
FOXA1-201ENST00000250448 DNHD1Q96M86 4753 aa11.45□□□□□ -0.58
FOXA1-201ENST00000250448 TRAV23DV6A0A075B6W5 121 aa11.45□□□□□ -0.58
FOXA1-201ENST00000250448 C4orf48Q5BLP8 95 aa11.44□□□□□ -0.58
FOXA1-201ENST00000250448 Q6ZTC4 211 aa11.44□□□□□ -0.58
FOXA1-201ENST00000250448 COL7A1Q02388 2944 aa11.44□□□□□ -0.58
FOXA1-201ENST00000250448 TRBV10-3A0A0K0K1G6 114 aa11.44□□□□□ -0.58
FOXA1-201ENST00000250448 Q6ZQT0 140 aa11.43□□□□□ -0.58
FOXA1-201ENST00000250448 C10orf25Q5T742 122 aa11.43□□□□□ -0.58
FOXA1-201ENST00000250448 RBM3P98179 157 aaKnown RBP11.42□□□□□ -0.58
FOXA1-201ENST00000250448 SPAG11BQ08648 103 aa11.42□□□□□ -0.58
FOXA1-201ENST00000250448 HUWE1Q7Z6Z7 4374 aaKnown RBP11.42□□□□□ -0.58
FOXA1-201ENST00000250448 UNQ6190/PRO20217Q6UXQ8 127 aa11.42□□□□□ -0.58
FOXA1-201ENST00000250448 C6orf223Q8N319 242 aa11.42□□□□□ -0.58
FOXA1-201ENST00000250448 LOC110117498A0A087WWA1 95 aa11.41□□□□□ -0.58
FOXA1-201ENST00000250448 MUC7Q8TAX7 377 aa11.41□□□□□ -0.58
FOXA1-201ENST00000250448 LAMTOR3Q9UHA4 124 aa11.4□□□□□ -0.58
FOXA1-201ENST00000250448 STAB2Q8WWQ8 2551 aa11.4□□□□□ -0.59
FOXA1-201ENST00000250448 IGLV6-57P01721 117 aa11.38□□□□□ -0.59
FOXA1-201ENST00000250448 KPRPQ5T749 579 aaPredicted RBP11.38□□□□□ -0.59
FOXA1-201ENST00000250448 M0R2N4 97 aa11.37□□□□□ -0.59
FOXA1-201ENST00000250448 C11orf45Q8TAV5 145 aa11.37□□□□□ -0.59
FOXA1-201ENST00000250448 Q6ZQY7 126 aa11.36□□□□□ -0.59
FOXA1-201ENST00000250448 TM2D3Q9BRN9 247 aa11.36□□□□□ -0.59
FOXA1-201ENST00000250448 NDUFC2-KCTD14E9PQ53 114 aa11.34□□□□□ -0.59
FOXA1-201ENST00000250448 LINC01547P58512 204 aaPredicted RBP11.34□□□□□ -0.59
FOXA1-201ENST00000250448 LELP1Q5T871 98 aa11.34□□□□□ -0.59
FOXA1-201ENST00000250448 Q6ZVQ6 151 aa11.33□□□□□ -0.6
FOXA1-201ENST00000250448 C20orf197Q8N268 126 aa11.33□□□□□ -0.6
FOXA1-201ENST00000250448 H3BQ85 93 aa11.32□□□□□ -0.6
FOXA1-201ENST00000250448 DEFB131BA0A096LNP1 70 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms