RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.07□□□□□ -0.48
SNX17-201ENST00000233575 Q6ZRP5 223 aa12.07□□□□□ -0.48
SNX17-201ENST00000233575 A0A0B4J2C4 111 aa12.06□□□□□ -0.48
SNX17-201ENST00000233575 NDUFC2-KCTD14E9PQ53 114 aa12.06□□□□□ -0.48
SNX17-201ENST00000233575 PPDPFQ9H3Y8 114 aa12.06□□□□□ -0.48
SNX17-201ENST00000233575 FRAS1Q86XX4 4008 aa12.06□□□□□ -0.48
SNX17-201ENST00000233575 LOC107984156A0A0G2JMH3 177 aa12.06□□□□□ -0.48
SNX17-201ENST00000233575 C1orf134Q5TEV5 83 aa12.06□□□□□ -0.48
SNX17-201ENST00000233575 ARL17AQ8IVW1 177 aa12.06□□□□□ -0.48
SNX17-201ENST00000233575 IGKV2-28A0A075B6P5 120 aa12.05□□□□□ -0.48
SNX17-201ENST00000233575 IGKV2D-28P01615 120 aa12.05□□□□□ -0.48
SNX17-201ENST00000233575 GAGE2EQ4V326 116 aa12.05□□□□□ -0.48
SNX17-201ENST00000233575 GAGE2DQ9UEU5 116 aa12.05□□□□□ -0.48
SNX17-201ENST00000233575 PRO1854Q9UHT4 67 aa12.05□□□□□ -0.48
SNX17-201ENST00000233575 PRR3P79522 188 aaKnown RBP12.04□□□□□ -0.48
SNX17-201ENST00000233575 PGPEP1Q9NXJ5 209 aa12.04□□□□□ -0.48
SNX17-201ENST00000233575 C14orf177Q52M58 125 aa12.03□□□□□ -0.48
SNX17-201ENST00000233575 A0A087WTM6 91 aa12.03□□□□□ -0.48
SNX17-201ENST00000233575 H7C2G1 150 aa12.03□□□□□ -0.48
SNX17-201ENST00000233575 TSPAN13O95857 204 aa12.03□□□□□ -0.48
SNX17-201ENST00000233575 CNBPP62633 177 aaKnown RBP12.03□□□□□ -0.48
SNX17-201ENST00000233575 RPL18AQ02543 176 aaKnown RBP12.02□□□□□ -0.49
SNX17-201ENST00000233575 LINC00337Q8N6G1 96 aa12.02□□□□□ -0.49
SNX17-201ENST00000233575 GTF2H5Q6ZYL4 71 aa12.01□□□□□ -0.49
SNX17-201ENST00000233575 A0A1W2PPM0 123 aa12.01□□□□□ -0.49
SNX17-201ENST00000233575 Q8N814 137 aa12.01□□□□□ -0.49
SNX17-201ENST00000233575 GAGE10A6NGK3 116 aa12□□□□□ -0.49
SNX17-201ENST00000233575 TLX1NBP0CAT3 122 aa12□□□□□ -0.49
SNX17-201ENST00000233575 RPL13AP40429 203 aaKnown RBP11.99□□□□□ -0.49
SNX17-201ENST00000233575 C9orf129Q5T035 196 aaKnown RBP11.99□□□□□ -0.49
SNX17-201ENST00000233575 HECTD4Q9Y4D8 3996 aa11.99□□□□□ -0.49
SNX17-201ENST00000233575 FUSP35637 526 aaKnown RBP eCLIP11.99□□□□□ -0.49
SNX17-201ENST00000233575 LINC01620Q4KN68 170 aa11.98□□□□□ -0.49
SNX17-201ENST00000233575 NCR3O14931 201 aa11.98□□□□□ -0.49
SNX17-201ENST00000233575 NDUFC2O95298 119 aa11.97□□□□□ -0.49
SNX17-201ENST00000233575 FABP2P12104 132 aa11.97□□□□□ -0.49
SNX17-201ENST00000233575 GAGE2BQ13066 116 aa11.97□□□□□ -0.49
SNX17-201ENST00000233575 RTL8CO15255 209 aa11.96□□□□□ -0.49
SNX17-201ENST00000233575 FAT2Q9NYQ8 4349 aa11.96□□□□□ -0.49
SNX17-201ENST00000233575 SCGB1A1P11684 91 aa11.96□□□□□ -0.5
SNX17-201ENST00000233575 TNP2Q05952 138 aa11.96□□□□□ -0.5
SNX17-201ENST00000233575 Q1RN00 199 aa11.96□□□□□ -0.5
SNX17-201ENST00000233575 DNAH11Q96DT5 4516 aa11.96□□□□□ -0.5
SNX17-201ENST00000233575 LOC107984640A0A0U1RRK4 108 aa11.95□□□□□ -0.5
SNX17-201ENST00000233575 KMT2CQ8NEZ4 4911 aaKnown RBP11.94□□□□□ -0.5
SNX17-201ENST00000233575 K7EP34 96 aa11.94□□□□□ -0.5
SNX17-201ENST00000233575 TRAV13-2A0A0B4J235 113 aa11.94□□□□□ -0.5
SNX17-201ENST00000233575 LCE6AA0A183 80 aa11.94□□□□□ -0.5
SNX17-201ENST00000233575 A0A096LNI7 61 aa11.93□□□□□ -0.5
SNX17-201ENST00000233575 FAM168BA1KXE4 195 aa11.93□□□□□ -0.5
SNX17-201ENST00000233575 VPREB1P12018 145 aa11.93□□□□□ -0.5
SNX17-201ENST00000233575 C9orf163Q8N9P6 203 aa11.93□□□□□ -0.5
SNX17-201ENST00000233575 SERTAD4-AS1Q5TG53 156 aa11.93□□□□□ -0.5
SNX17-201ENST00000233575 OR13C6PQ8NH95 151 aa11.93□□□□□ -0.5
SNX17-201ENST00000233575 SPCS1Q9Y6A9 102 aa11.93□□□□□ -0.5
SNX17-201ENST00000233575 RYR2Q92736 4967 aa11.92□□□□□ -0.5
SNX17-201ENST00000233575 IGKV2-24A0A0C4DH68 120 aa11.91□□□□□ -0.5
SNX17-201ENST00000233575 TRIAP1O43715 76 aa11.91□□□□□ -0.5
SNX17-201ENST00000233575 PSMB2P49721 201 aa11.9□□□□□ -0.5
SNX17-201ENST00000233575 KRTAP7-1Q8IUC3 87 aa11.9□□□□□ -0.5
SNX17-201ENST00000233575 CHTF8P0CG12 524 aa11.89□□□□□ -0.51
SNX17-201ENST00000233575 C16orf90A8MZG2 172 aa11.88□□□□□ -0.51
SNX17-201ENST00000233575 DNAH5Q8TE73 4624 aa11.88□□□□□ -0.51
SNX17-201ENST00000233575 SDIM1Q6ZPB5 146 aa11.87□□□□□ -0.51
SNX17-201ENST00000233575 SMIM11BQ8TCY0 68 aa11.87□□□□□ -0.51
SNX17-201ENST00000233575 SCGB1C2P0DMR2 95 aa11.87□□□□□ -0.51
SNX17-201ENST00000233575 TRBV10-2A0A0K0K1G8 114 aa11.86□□□□□ -0.51
SNX17-201ENST00000233575 S100A7L2Q5SY68 101 aa11.86□□□□□ -0.51
SNX17-201ENST00000233575 PKD1P98161 4303 aa11.86□□□□□ -0.51
SNX17-201ENST00000233575 TRBV10-3A0A0K0K1G6 114 aa11.85□□□□□ -0.51
SNX17-201ENST00000233575 LYRM7Q5U5X0 104 aa11.85□□□□□ -0.51
SNX17-201ENST00000233575 FAM19A5Q7Z5A7 132 aaPredicted RBP11.85□□□□□ -0.51
SNX17-201ENST00000233575 TMEM126AQ9H061 195 aa11.85□□□□□ -0.51
SNX17-201ENST00000233575 PANO1I0J062 215 aa11.84□□□□□ -0.51
SNX17-201ENST00000233575 IGLV6-57P01721 117 aa11.84□□□□□ -0.51
SNX17-201ENST00000233575 PLA2G2DQ9UNK4 145 aa11.84□□□□□ -0.51
SNX17-201ENST00000233575 A0A1B0GV72 72 aa11.83□□□□□ -0.52
SNX17-201ENST00000233575 M0R378 163 aa11.83□□□□□ -0.52
SNX17-201ENST00000233575 RPL28P46779 137 aaKnown RBP11.83□□□□□ -0.52
SNX17-201ENST00000233575 IGLV5-52A0A0A0MRZ9 124 aa11.82□□□□□ -0.52
SNX17-201ENST00000233575 A0A1W2PNN7 141 aa11.82□□□□□ -0.52
SNX17-201ENST00000233575 H3BMG7 143 aa11.82□□□□□ -0.52
SNX17-201ENST00000233575 KRTAP10-2P60368 255 aa11.82□□□□□ -0.52
SNX17-201ENST00000233575 SIGMAR1Q99720 223 aa11.82□□□□□ -0.52
SNX17-201ENST00000233575 TCL1BO95988 128 aa11.82□□□□□ -0.52
SNX17-201ENST00000233575 NKAPP1Q8N9T2 125 aa11.82□□□□□ -0.52
SNX17-201ENST00000233575 C7orf33Q8WU49 177 aa11.81□□□□□ -0.52
SNX17-201ENST00000233575 CLEC2BQ92478 149 aa11.81□□□□□ -0.52
SNX17-201ENST00000233575 COX6CP09669 75 aa11.81□□□□□ -0.52
SNX17-201ENST00000233575 C22orf24Q9Y442 160 aa11.81□□□□□ -0.52
SNX17-201ENST00000233575 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.8□□□□□ -0.52
SNX17-201ENST00000233575 IGLV5-37A0A075B6J1 123 aa11.79□□□□□ -0.52
SNX17-201ENST00000233575 TRBV20-1A0A075B6N2 111 aa11.79□□□□□ -0.52
SNX17-201ENST00000233575 RPL37AP8A6NKH3 93 aa11.77□□□□□ -0.53
SNX17-201ENST00000233575 C6orf99Q4VX62 202 aa11.77□□□□□ -0.53
SNX17-201ENST00000233575 TRAV23DV6A0A075B6W5 121 aa11.76□□□□□ -0.53
SNX17-201ENST00000233575 FAM218AQ96MZ4 157 aa11.76□□□□□ -0.53
SNX17-201ENST00000233575 LINC00167Q96N53 147 aa11.76□□□□□ -0.53
SNX17-201ENST00000233575 J3QR89 54 aa11.76□□□□□ -0.53
SNX17-201ENST00000233575 MRPL55Q7Z7F7 128 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms