RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 LINC00336Q6ZUF6 198 aa9.57□□□□□ -0.88
HCFC2-201ENST00000229330 Q9BRP9 147 aa9.57□□□□□ -0.88
HCFC2-201ENST00000229330 Q6ZRU5 148 aa9.56□□□□□ -0.88
HCFC2-201ENST00000229330 EIF4EBP3O60516 100 aaPredicted RBP9.56□□□□□ -0.88
HCFC2-201ENST00000229330 LINC00474Q9P2X8 69 aa9.55□□□□□ -0.88
HCFC2-201ENST00000229330 PCNTO95613 3336 aa9.55□□□□□ -0.88
HCFC2-201ENST00000229330 A0A1B0GW54 56 aa9.55□□□□□ -0.88
HCFC2-201ENST00000229330 IGHV6-1A0A0B4J1U7 121 aa9.54□□□□□ -0.88
HCFC2-201ENST00000229330 C16orf95Q9H693 158 aa9.54□□□□□ -0.88
HCFC2-201ENST00000229330 ERC2-IT1O76042 136 aa9.54□□□□□ -0.88
HCFC2-201ENST00000229330 ELOF1P60002 83 aaKnown RBP9.54□□□□□ -0.88
HCFC2-201ENST00000229330 KLKP1Q107X0 134 aa9.53□□□□□ -0.88
HCFC2-201ENST00000229330 KLK9Q2XQG4 91 aa9.52□□□□□ -0.89
HCFC2-201ENST00000229330 PCSK5Q92824 1860 aa9.52□□□□□ -0.89
HCFC2-201ENST00000229330 POLQO75417 2590 aa9.51□□□□□ -0.89
HCFC2-201ENST00000229330 PKD1L2Q7Z442 2459 aa9.51□□□□□ -0.89
HCFC2-201ENST00000229330 LYPD5Q6UWN5 251 aa9.51□□□□□ -0.89
HCFC2-201ENST00000229330 MTORP42345 2549 aa9.5□□□□□ -0.89
HCFC2-201ENST00000229330 FASNP49327 2511 aaKnown RBP9.49□□□□□ -0.89
HCFC2-201ENST00000229330 H7BZZ5 65 aa9.49□□□□□ -0.89
HCFC2-201ENST00000229330 C6orf48Q9UBA6 75 aa9.49□□□□□ -0.89
HCFC2-201ENST00000229330 CHD7Q9P2D1 2997 aa9.49□□□□□ -0.89
HCFC2-201ENST00000229330 PRRC2CQ9Y520 2896 aaKnown RBP9.48□□□□□ -0.89
HCFC2-201ENST00000229330 C7orf33Q8WU49 177 aa9.48□□□□□ -0.89
HCFC2-201ENST00000229330 H3BPC8 53 aa9.47□□□□□ -0.89
HCFC2-201ENST00000229330 DOPEY1Q5JWR5 2465 aa9.47□□□□□ -0.89
HCFC2-201ENST00000229330 Q8NBF4 154 aa9.46□□□□□ -0.89
HCFC2-201ENST00000229330 WIPF1O43516 503 aa9.46□□□□□ -0.9
HCFC2-201ENST00000229330 SPAG11AQ6PDA7 123 aa9.45□□□□□ -0.9
HCFC2-201ENST00000229330 C22orf24Q9Y442 160 aa9.45□□□□□ -0.9
HCFC2-201ENST00000229330 A8MUN3 132 aa9.45□□□□□ -0.9
HCFC2-201ENST00000229330 LINC01600Q96MT4 127 aa9.44□□□□□ -0.9
HCFC2-201ENST00000229330 EPG5Q9HCE0 2579 aa9.44□□□□□ -0.9
HCFC2-201ENST00000229330 PRLHP81277 87 aa9.44□□□□□ -0.9
HCFC2-201ENST00000229330 Q6ZTC4 211 aa9.43□□□□□ -0.9
HCFC2-201ENST00000229330 COL27A1Q8IZC6 1860 aaPredicted RBP9.42□□□□□ -0.9
HCFC2-201ENST00000229330 TP53AIP1Q9HCN2 124 aa9.42□□□□□ -0.9
HCFC2-201ENST00000229330 ANKRD17O75179 2603 aaKnown RBP9.42□□□□□ -0.9
HCFC2-201ENST00000229330 HTTP42858 3142 aa9.42□□□□□ -0.9
HCFC2-201ENST00000229330 IGLV6-57P01721 117 aa9.41□□□□□ -0.9
HCFC2-201ENST00000229330 C5orf42Q9H799 3197 aa9.4□□□□□ -0.9
HCFC2-201ENST00000229330 SERTAD4-AS1Q5TG53 156 aa9.4□□□□□ -0.9
HCFC2-201ENST00000229330 ACANP16112 2415 aa9.4□□□□□ -0.9
HCFC2-201ENST00000229330 FSHBP01225 129 aa9.4□□□□□ -0.9
HCFC2-201ENST00000229330 LINC00167Q96N53 147 aa9.39□□□□□ -0.91
HCFC2-201ENST00000229330 A0A1B0GU69 56 aa9.39□□□□□ -0.91
HCFC2-201ENST00000229330 C9orf129Q5T035 196 aaKnown RBP9.39□□□□□ -0.91
HCFC2-201ENST00000229330 CD164Q04900 197 aa9.38□□□□□ -0.91
HCFC2-201ENST00000229330 CYP4F30PQ9H0H9 118 aa9.38□□□□□ -0.91
HCFC2-201ENST00000229330 MUC4Q99102 2169 aa9.38□□□□□ -0.91
HCFC2-201ENST00000229330 Q6ZRX8 168 aa9.38□□□□□ -0.91
HCFC2-201ENST00000229330 LINC00476Q8WZB0 136 aa9.37□□□□□ -0.91
HCFC2-201ENST00000229330 RETNLBQ9BQ08 111 aa9.37□□□□□ -0.91
HCFC2-201ENST00000229330 TRAV22A0A0B4J277 110 aa9.37□□□□□ -0.91
HCFC2-201ENST00000229330 M0R2N4 97 aa9.36□□□□□ -0.91
HCFC2-201ENST00000229330 CIRBP-AS1Q8TBR5 109 aa9.36□□□□□ -0.91
HCFC2-201ENST00000229330 TRBV7-4A0A0J9YYF1 115 aa9.36□□□□□ -0.91
HCFC2-201ENST00000229330 ACYP2P14621 99 aa9.35□□□□□ -0.91
HCFC2-201ENST00000229330 GVQW2A0A096LPI5 108 aaPredicted RBP9.35□□□□□ -0.91
HCFC2-201ENST00000229330 SPINK1P00995 79 aa9.34□□□□□ -0.91
HCFC2-201ENST00000229330 CHD9Q3L8U1 2897 aa9.34□□□□□ -0.91
HCFC2-201ENST00000229330 K7EQZ3 153 aa9.34□□□□□ -0.91
HCFC2-201ENST00000229330 ST20-AS1Q8NBB2 130 aa9.33□□□□□ -0.92
HCFC2-201ENST00000229330 C8orf87E5RJ46 101 aa9.33□□□□□ -0.92
HCFC2-201ENST00000229330 RANBP2P49792 3224 aaKnown RBP9.32□□□□□ -0.92
HCFC2-201ENST00000229330 VPREB1P12018 145 aa9.32□□□□□ -0.92
HCFC2-201ENST00000229330 RPL37AP61513 92 aaKnown RBP9.31□□□□□ -0.92
HCFC2-201ENST00000229330 COA5Q86WW8 74 aa9.31□□□□□ -0.92
HCFC2-201ENST00000229330 LINC01556Q5JQF7 62 aa9.3□□□□□ -0.92
HCFC2-201ENST00000229330 ZNF575Q86XF7 245 aa9.3□□□□□ -0.92
HCFC2-201ENST00000229330 X6R8D5 127 aa9.3□□□□□ -0.92
HCFC2-201ENST00000229330 OBSCN-AS1Q96MR7 158 aa9.3□□□□□ -0.92
HCFC2-201ENST00000229330 LY6G6CO95867 125 aa9.28□□□□□ -0.92
HCFC2-201ENST00000229330 LINC00528Q8N1L1 170 aa9.28□□□□□ -0.92
HCFC2-201ENST00000229330 ATP11AUNQ6ZP68 121 aa9.28□□□□□ -0.92
HCFC2-201ENST00000229330 KTN1-AS1Q86SY8 53 aa9.27□□□□□ -0.92
HCFC2-201ENST00000229330 LOC101927531A0A1B0GV80 90 aa9.26□□□□□ -0.93
HCFC2-201ENST00000229330 NUPR2A6NF83 97 aa9.26□□□□□ -0.93
HCFC2-201ENST00000229330 PRR15Q8IV56 129 aa9.25□□□□□ -0.93
HCFC2-201ENST00000229330 Q6ZRP5 223 aa9.24□□□□□ -0.93
HCFC2-201ENST00000229330 Q5XG85 94 aa9.24□□□□□ -0.93
HCFC2-201ENST00000229330 A8MWP4 228 aa9.23□□□□□ -0.93
HCFC2-201ENST00000229330 MKI67P46013 3256 aaKnown RBP9.22□□□□□ -0.93
HCFC2-201ENST00000229330 IGKV2D-30A0A075B6S6 120 aa9.22□□□□□ -0.93
HCFC2-201ENST00000229330 IGKV2-30P06310 120 aa9.22□□□□□ -0.93
HCFC2-201ENST00000229330 C7orf65Q6ZTY9 151 aa9.22□□□□□ -0.93
HCFC2-201ENST00000229330 H3BNG1 76 aa9.22□□□□□ -0.93
HCFC2-201ENST00000229330 KCNQ1DNQ9H478 68 aa9.21□□□□□ -0.93
HCFC2-201ENST00000229330 MOBPQ13875 183 aa9.2□□□□□ -0.94
HCFC2-201ENST00000229330 LAMA3Q16787 3333 aa9.19□□□□□ -0.94
HCFC2-201ENST00000229330 BPTFQ12830 3046 aa9.18□□□□□ -0.94
HCFC2-201ENST00000229330 Q8N377 158 aa9.18□□□□□ -0.94
HCFC2-201ENST00000229330 EPM2AB3EWF7 344 aa9.17□□□□□ -0.94
HCFC2-201ENST00000229330 CYSTM1Q9H1C7 97 aa9.17□□□□□ -0.94
HCFC2-201ENST00000229330 KRTAP24-1Q3LI83 254 aa9.17□□□□□ -0.94
HCFC2-201ENST00000229330 LCA10Q71F78 164 aa9.17□□□□□ -0.94
HCFC2-201ENST00000229330 F8P00451 2351 aa9.16□□□□□ -0.94
HCFC2-201ENST00000229330 TRANK1O15050 2925 aa9.15□□□□□ -0.94
HCFC2-201ENST00000229330 IGLV1-50A0A075B6I6 118 aa9.15□□□□□ -0.94
HCFC2-201ENST00000229330 Q1T7F1 81 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms