RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 RETNQ9HD89 108 aa9.64□□□□□ -0.87
NFKB1-201ENST00000226574 FAM19A5Q7Z5A7 132 aaPredicted RBP9.64□□□□□ -0.87
NFKB1-201ENST00000226574 DEFB131BA0A096LNP1 70 aa9.63□□□□□ -0.87
NFKB1-201ENST00000226574 ZNF73O43830 326 aaPredicted RBP9.63□□□□□ -0.87
NFKB1-201ENST00000226574 PDE6GP18545 87 aa9.63□□□□□ -0.87
NFKB1-201ENST00000226574 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.62□□□□□ -0.87
NFKB1-201ENST00000226574 C11orf45Q8TAV5 145 aa9.62□□□□□ -0.87
NFKB1-201ENST00000226574 SYCNQ0VAF6 134 aa9.61□□□□□ -0.87
NFKB1-201ENST00000226574 Q8N9L7 120 aa9.61□□□□□ -0.87
NFKB1-201ENST00000226574 NHLRC4P0CG21 123 aaPredicted RBP9.61□□□□□ -0.87
NFKB1-201ENST00000226574 COL6A5A8TX70 2615 aa9.61□□□□□ -0.87
NFKB1-201ENST00000226574 TRBV7-7A0A0K0K1E9 115 aa9.6□□□□□ -0.87
NFKB1-201ENST00000226574 LY6G6DO95868 133 aa9.6□□□□□ -0.87
NFKB1-201ENST00000226574 UTP20O75691 2785 aaKnown RBP9.6□□□□□ -0.87
NFKB1-201ENST00000226574 ATP5EP2Q5VTU8 51 aa9.6□□□□□ -0.87
NFKB1-201ENST00000226574 LELP1Q5T871 98 aa9.59□□□□□ -0.87
NFKB1-201ENST00000226574 SMCR5Q8TEV8 140 aa9.59□□□□□ -0.87
NFKB1-201ENST00000226574 RMI2Q96E14 147 aa9.59□□□□□ -0.87
NFKB1-201ENST00000226574 IGSF10Q6WRI0 2623 aa9.59□□□□□ -0.87
NFKB1-201ENST00000226574 IGHV4-30-4P0DP06 118 aa9.59□□□□□ -0.87
NFKB1-201ENST00000226574 MIFP14174 115 aa9.59□□□□□ -0.87
NFKB1-201ENST00000226574 KIR2DL5BQ8NHK3 375 aa9.58□□□□□ -0.88
NFKB1-201ENST00000226574 IGLV5-45A0A087WSX0 123 aa9.58□□□□□ -0.88
NFKB1-201ENST00000226574 C10orf25Q5T742 122 aa9.57□□□□□ -0.88
NFKB1-201ENST00000226574 WFDC10BQ8IUB3 73 aa9.57□□□□□ -0.88
NFKB1-201ENST00000226574 WFDC13Q8IUB5 93 aa9.57□□□□□ -0.88
NFKB1-201ENST00000226574 A0A0J9YWU9 116 aa9.56□□□□□ -0.88
NFKB1-201ENST00000226574 NANOS2P60321 138 aaKnown RBP9.56□□□□□ -0.88
NFKB1-201ENST00000226574 CELSR2Q9HCU4 2923 aa9.56□□□□□ -0.88
NFKB1-201ENST00000226574 H0Y9J4 135 aa9.56□□□□□ -0.88
NFKB1-201ENST00000226574 SETXQ7Z333 2677 aaKnown RBP9.55□□□□□ -0.88
NFKB1-201ENST00000226574 NDUFC2O95298 119 aa9.55□□□□□ -0.88
NFKB1-201ENST00000226574 MP68P56378 58 aa9.55□□□□□ -0.88
NFKB1-201ENST00000226574 FAM30AQ9NZY2 134 aa9.55□□□□□ -0.88
NFKB1-201ENST00000226574 NF1P21359 2839 aa9.54□□□□□ -0.88
NFKB1-201ENST00000226574 STAB1Q9NY15 2570 aa9.54□□□□□ -0.88
NFKB1-201ENST00000226574 COX17Q14061 63 aa9.54□□□□□ -0.88
NFKB1-201ENST00000226574 KLK9Q2XQG4 91 aa9.54□□□□□ -0.88
NFKB1-201ENST00000226574 UBE2AP49459 152 aa9.54□□□□□ -0.88
NFKB1-201ENST00000226574 Q6ZTC4 211 aa9.54□□□□□ -0.88
NFKB1-201ENST00000226574 Q6ZVQ6 151 aa9.54□□□□□ -0.88
NFKB1-201ENST00000226574 M0R378 163 aa9.53□□□□□ -0.88
NFKB1-201ENST00000226574 DEFB116Q30KQ4 102 aa9.52□□□□□ -0.88
NFKB1-201ENST00000226574 FAM19A3Q7Z5A8 133 aa9.52□□□□□ -0.88
NFKB1-201ENST00000226574 LINC00575Q6W349 94 aa9.52□□□□□ -0.89
NFKB1-201ENST00000226574 A0A1B0GUV1 79 aa9.51□□□□□ -0.89
NFKB1-201ENST00000226574 C9orf129Q5T035 196 aaKnown RBP9.51□□□□□ -0.89
NFKB1-201ENST00000226574 CRYBG3Q68DQ2 2970 aa9.51□□□□□ -0.89
NFKB1-201ENST00000226574 H3BQ85 93 aa9.5□□□□□ -0.89
NFKB1-201ENST00000226574 LINC01547P58512 204 aaPredicted RBP9.5□□□□□ -0.89
NFKB1-201ENST00000226574 FBN2P35556 2912 aa9.5□□□□□ -0.89
NFKB1-201ENST00000226574 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.49□□□□□ -0.89
NFKB1-201ENST00000226574 TRAV7A0A075B6U4 112 aa9.48□□□□□ -0.89
NFKB1-201ENST00000226574 Q6ZRU5 148 aa9.48□□□□□ -0.89
NFKB1-201ENST00000226574 MUC7Q8TAX7 377 aa9.48□□□□□ -0.89
NFKB1-201ENST00000226574 CUBNO60494 3623 aa9.46□□□□□ -0.9
NFKB1-201ENST00000226574 SPTSSBQ8NFR3 76 aa9.46□□□□□ -0.9
NFKB1-201ENST00000226574 NDUFC2-KCTD14E9PQ53 114 aa9.45□□□□□ -0.9
NFKB1-201ENST00000226574 NDUFB1O75438 58 aa9.45□□□□□ -0.9
NFKB1-201ENST00000226574 C4orf26Q17RF5 130 aa9.44□□□□□ -0.9
NFKB1-201ENST00000226574 LYPD5Q6UWN5 251 aa9.44□□□□□ -0.9
NFKB1-201ENST00000226574 EGFEM1PQ0D2K5 195 aa9.44□□□□□ -0.9
NFKB1-201ENST00000226574 C1orf137Q5JT78 98 aa9.43□□□□□ -0.9
NFKB1-201ENST00000226574 NSD1Q96L73 2696 aaPredicted RBP9.43□□□□□ -0.9
NFKB1-201ENST00000226574 SPATA3Q8NHX4 192 aa9.43□□□□□ -0.9
NFKB1-201ENST00000226574 X6R8D5 127 aa9.42□□□□□ -0.9
NFKB1-201ENST00000226574 CSMD1Q96PZ7 3565 aa9.42□□□□□ -0.9
NFKB1-201ENST00000226574 CRYGAP11844 174 aa9.42□□□□□ -0.9
NFKB1-201ENST00000226574 TRAV10A0A0B4J240 114 aa9.41□□□□□ -0.9
NFKB1-201ENST00000226574 C6orf48Q9UBA6 75 aa9.41□□□□□ -0.9
NFKB1-201ENST00000226574 DCHS2Q6V1P9 2916 aa9.41□□□□□ -0.9
NFKB1-201ENST00000226574 LINC01561Q8N1V8 128 aa9.41□□□□□ -0.9
NFKB1-201ENST00000226574 ITPR2Q14571 2701 aa9.41□□□□□ -0.9
NFKB1-201ENST00000226574 BAHCC1Q9P281 2608 aa9.41□□□□□ -0.9
NFKB1-201ENST00000226574 TMEM254Q8TBM7 123 aa9.4□□□□□ -0.9
NFKB1-201ENST00000226574 M0R2N4 97 aa9.4□□□□□ -0.91
NFKB1-201ENST00000226574 GIG44P09565 113 aaPredicted RBP9.4□□□□□ -0.91
NFKB1-201ENST00000226574 SMIM26A0A096LP01 95 aa9.39□□□□□ -0.91
NFKB1-201ENST00000226574 IGKV4-1P06312 121 aa9.39□□□□□ -0.91
NFKB1-201ENST00000226574 FAM104AQ969W3 186 aa9.39□□□□□ -0.91
NFKB1-201ENST00000226574 CR1P17927 2039 aa9.38□□□□□ -0.91
NFKB1-201ENST00000226574 SPINK6Q6UWN8 80 aa9.37□□□□□ -0.91
NFKB1-201ENST00000226574 SMG1Q96Q15 3661 aaKnown RBP9.37□□□□□ -0.91
NFKB1-201ENST00000226574 HIVEP1P15822 2718 aa9.37□□□□□ -0.91
NFKB1-201ENST00000226574 LINC00208Q96KT6 92 aa9.37□□□□□ -0.91
NFKB1-201ENST00000226574 TM2D3Q9BRN9 247 aa9.37□□□□□ -0.91
NFKB1-201ENST00000226574 NDUFC1O43677 76 aa9.36□□□□□ -0.91
NFKB1-201ENST00000226574 DHRS4-AS1Q9P1J3 65 aa9.36□□□□□ -0.91
NFKB1-201ENST00000226574 SERP1Q9Y6X1 66 aa9.36□□□□□ -0.91
NFKB1-201ENST00000226574 KIAA0087Q14695 138 aa9.36□□□□□ -0.91
NFKB1-201ENST00000226574 A0A087WSZ3 146 aa9.35□□□□□ -0.91
NFKB1-201ENST00000226574 PSPHP1O15172 72 aa9.35□□□□□ -0.91
NFKB1-201ENST00000226574 FSHBP01225 129 aa9.35□□□□□ -0.91
NFKB1-201ENST00000226574 C16orf95Q9H693 158 aa9.35□□□□□ -0.91
NFKB1-201ENST00000226574 PRLHP81277 87 aa9.35□□□□□ -0.91
NFKB1-201ENST00000226574 Q6ZQT0 140 aa9.34□□□□□ -0.91
NFKB1-201ENST00000226574 HRNRQ86YZ3 2850 aaPredicted RBP9.34□□□□□ -0.91
NFKB1-201ENST00000226574 IGLV9-49A0A0B4J1Y8 123 aa9.34□□□□□ -0.91
NFKB1-201ENST00000226574 ESRGQ1W209 222 aa9.34□□□□□ -0.91
NFKB1-201ENST00000226574 PLAC8L1A1L4L8 177 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms