RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 LYPD5Q6UWN5 251 aa9.89□□□□□ -0.83
CNOT3-201ENST00000221232 Q8N814 137 aa9.89□□□□□ -0.83
CNOT3-201ENST00000221232 FAM19A5Q7Z5A7 132 aaPredicted RBP9.88□□□□□ -0.83
CNOT3-201ENST00000221232 WFDC10BQ8IUB3 73 aa9.88□□□□□ -0.83
CNOT3-201ENST00000221232 F8P00451 2351 aa9.88□□□□□ -0.83
CNOT3-201ENST00000221232 COX17Q14061 63 aa9.87□□□□□ -0.83
CNOT3-201ENST00000221232 LINC01561Q8N1V8 128 aa9.87□□□□□ -0.83
CNOT3-201ENST00000221232 STAB1Q9NY15 2570 aa9.86□□□□□ -0.83
CNOT3-201ENST00000221232 Q6ZTC4 211 aa9.85□□□□□ -0.83
CNOT3-201ENST00000221232 A0A087WVE0 104 aa9.85□□□□□ -0.83
CNOT3-201ENST00000221232 NDUFC2O95298 119 aa9.85□□□□□ -0.83
CNOT3-201ENST00000221232 KRTAP10-11P60412 298 aa9.85□□□□□ -0.83
CNOT3-201ENST00000221232 WFDC9Q8NEX5 89 aa9.85□□□□□ -0.83
CNOT3-201ENST00000221232 KPRPQ5T749 579 aaPredicted RBP9.84□□□□□ -0.83
CNOT3-201ENST00000221232 OBSCN-AS1Q96MR7 158 aa9.83□□□□□ -0.84
CNOT3-201ENST00000221232 C6orf48Q9UBA6 75 aa9.83□□□□□ -0.84
CNOT3-201ENST00000221232 TENM3Q9P273 2699 aa9.83□□□□□ -0.84
CNOT3-201ENST00000221232 PRR34Q9NV39 138 aa9.83□□□□□ -0.84
CNOT3-201ENST00000221232 IMUPQ9GZP8 106 aa9.82□□□□□ -0.84
CNOT3-201ENST00000221232 ANK2Q01484 3957 aa9.81□□□□□ -0.84
CNOT3-201ENST00000221232 FBN1P35555 2871 aaKnown RBP9.81□□□□□ -0.84
CNOT3-201ENST00000221232 NOTCH1P46531 2555 aa9.81□□□□□ -0.84
CNOT3-201ENST00000221232 TRBV10-3A0A0K0K1G6 114 aa9.81□□□□□ -0.84
CNOT3-201ENST00000221232 TMEM256-PLSCR3K7ERE1 68 aa9.81□□□□□ -0.84
CNOT3-201ENST00000221232 MAST4O15021 2626 aa9.8□□□□□ -0.84
CNOT3-201ENST00000221232 ZNF561-AS1K7EIQ3 104 aa9.8□□□□□ -0.84
CNOT3-201ENST00000221232 HIST1H4AP62805 103 aaKnown RBP9.8□□□□□ -0.84
CNOT3-201ENST00000221232 LINC00575Q6W349 94 aa9.8□□□□□ -0.84
CNOT3-201ENST00000221232 LAMTOR3Q9UHA4 124 aa9.8□□□□□ -0.84
CNOT3-201ENST00000221232 CCKP06307 115 aa9.79□□□□□ -0.84
CNOT3-201ENST00000221232 CAMK2N2Q96S95 79 aa9.79□□□□□ -0.84
CNOT3-201ENST00000221232 CYSTM1Q9H1C7 97 aa9.79□□□□□ -0.84
CNOT3-201ENST00000221232 A0A0J9YWU9 116 aa9.79□□□□□ -0.84
CNOT3-201ENST00000221232 hADV29S1A0JD25 119 aa9.79□□□□□ -0.84
CNOT3-201ENST00000221232 C4orf26Q17RF5 130 aa9.79□□□□□ -0.84
CNOT3-201ENST00000221232 ESRGQ1W209 222 aa9.78□□□□□ -0.84
CNOT3-201ENST00000221232 PRB2P02812 416 aaPredicted RBP9.78□□□□□ -0.84
CNOT3-201ENST00000221232 Q6ZQY7 126 aa9.77□□□□□ -0.85
CNOT3-201ENST00000221232 LINC00167Q96N53 147 aa9.77□□□□□ -0.85
CNOT3-201ENST00000221232 HRCT1Q6UXD1 115 aa9.76□□□□□ -0.85
CNOT3-201ENST00000221232 JMJD7-PLA2G4BH0Y9G9 81 aa9.76□□□□□ -0.85
CNOT3-201ENST00000221232 M0R2N4 97 aa9.76□□□□□ -0.85
CNOT3-201ENST00000221232 Q6ZRU5 148 aa9.76□□□□□ -0.85
CNOT3-201ENST00000221232 IGKV2D-24A0A075B6R9 120 aa9.75□□□□□ -0.85
CNOT3-201ENST00000221232 C9orf153Q5TBE3 101 aa9.75□□□□□ -0.85
CNOT3-201ENST00000221232 OXTP01178 125 aa9.74□□□□□ -0.85
CNOT3-201ENST00000221232 IGLV6-57P01721 117 aa9.74□□□□□ -0.85
CNOT3-201ENST00000221232 TRAV23DV6A0A075B6W5 121 aa9.73□□□□□ -0.85
CNOT3-201ENST00000221232 A0A1B0GX51 115 aa9.73□□□□□ -0.85
CNOT3-201ENST00000221232 RBM3P98179 157 aaKnown RBP9.73□□□□□ -0.85
CNOT3-201ENST00000221232 DEFB131BA0A096LNP1 70 aa9.72□□□□□ -0.85
CNOT3-201ENST00000221232 Q6JHZ5 121 aa9.72□□□□□ -0.85
CNOT3-201ENST00000221232 FAM19A1Q7Z5A9 133 aa9.72□□□□□ -0.85
CNOT3-201ENST00000221232 C3orf22Q8N5N4 141 aa9.72□□□□□ -0.85
CNOT3-201ENST00000221232 KRTAP24-1Q3LI83 254 aa9.72□□□□□ -0.85
CNOT3-201ENST00000221232 DIRC1Q969H9 104 aa9.71□□□□□ -0.86
CNOT3-201ENST00000221232 WIPF1O43516 503 aa9.7□□□□□ -0.86
CNOT3-201ENST00000221232 ZNF73O43830 326 aaPredicted RBP9.7□□□□□ -0.86
CNOT3-201ENST00000221232 C15orf56Q8N910 161 aa9.7□□□□□ -0.86
CNOT3-201ENST00000221232 C1orf43Q9BWL3 253 aa9.7□□□□□ -0.86
CNOT3-201ENST00000221232 KRTAP26-1Q6PEX3 210 aa9.7□□□□□ -0.86
CNOT3-201ENST00000221232 C11orf45Q8TAV5 145 aa9.69□□□□□ -0.86
CNOT3-201ENST00000221232 MRAPQ8TCY5 172 aa9.69□□□□□ -0.86
CNOT3-201ENST00000221232 GVQW2A0A096LPI5 108 aaPredicted RBP9.69□□□□□ -0.86
CNOT3-201ENST00000221232 UQCRQO14949 82 aa9.68□□□□□ -0.86
CNOT3-201ENST00000221232 COX7BP24311 80 aa9.68□□□□□ -0.86
CNOT3-201ENST00000221232 Q6ZRP5 223 aa9.68□□□□□ -0.86
CNOT3-201ENST00000221232 VPREB1P12018 145 aa9.67□□□□□ -0.86
CNOT3-201ENST00000221232 HAMPP81172 84 aa9.67□□□□□ -0.86
CNOT3-201ENST00000221232 UBL5Q9BZL1 73 aa9.67□□□□□ -0.86
CNOT3-201ENST00000221232 PKIGQ9Y2B9 76 aa9.67□□□□□ -0.86
CNOT3-201ENST00000221232 USP17L23D6RBM5 183 aa9.67□□□□□ -0.86
CNOT3-201ENST00000221232 COX7CP15954 63 aa9.67□□□□□ -0.86
CNOT3-201ENST00000221232 Q6ZQT0 140 aa9.67□□□□□ -0.86
CNOT3-201ENST00000221232 C2orf48Q96LS8 159 aa9.67□□□□□ -0.86
CNOT3-201ENST00000221232 DSCR8Q96T75 97 aa9.67□□□□□ -0.86
CNOT3-201ENST00000221232 ATOX1O00244 68 aa9.66□□□□□ -0.86
CNOT3-201ENST00000221232 COL6A5A8TX70 2615 aa9.66□□□□□ -0.86
CNOT3-201ENST00000221232 EGFEM1PQ0D2K5 195 aa9.65□□□□□ -0.87
CNOT3-201ENST00000221232 NDUFC2-KCTD14E9PQ53 114 aa9.64□□□□□ -0.87
CNOT3-201ENST00000221232 J3KT08 172 aa9.64□□□□□ -0.87
CNOT3-201ENST00000221232 SCXQ7RTU7 201 aa9.64□□□□□ -0.87
CNOT3-201ENST00000221232 DEFB105AQ8NG35 78 aa9.64□□□□□ -0.87
CNOT3-201ENST00000221232 MUC7Q8TAX7 377 aa9.63□□□□□ -0.87
CNOT3-201ENST00000221232 CASC10Q5T4H9 136 aa9.63□□□□□ -0.87
CNOT3-201ENST00000221232 H3BNG1 76 aa9.62□□□□□ -0.87
CNOT3-201ENST00000221232 M0R378 163 aa9.62□□□□□ -0.87
CNOT3-201ENST00000221232 SYCNQ0VAF6 134 aa9.62□□□□□ -0.87
CNOT3-201ENST00000221232 UPK3BQ9BT76 320 aa9.61□□□□□ -0.87
CNOT3-201ENST00000221232 ELOF1P60002 83 aaKnown RBP9.61□□□□□ -0.87
CNOT3-201ENST00000221232 RPL37AP8A6NKH3 93 aa9.61□□□□□ -0.87
CNOT3-201ENST00000221232 SERTAD4-AS1Q5TG53 156 aa9.6□□□□□ -0.87
CNOT3-201ENST00000221232 NBEAL1Q6ZS30 2694 aa9.6□□□□□ -0.87
CNOT3-201ENST00000221232 GHRHP01286 108 aa9.6□□□□□ -0.87
CNOT3-201ENST00000221232 LINC01556Q5JQF7 62 aa9.6□□□□□ -0.87
CNOT3-201ENST00000221232 Q5XG85 94 aa9.59□□□□□ -0.87
CNOT3-201ENST00000221232 SEC61GP60059 68 aa9.59□□□□□ -0.87
CNOT3-201ENST00000221232 Q6ZVQ6 151 aa9.59□□□□□ -0.87
CNOT3-201ENST00000221232 FAM168BA1KXE4 195 aa9.58□□□□□ -0.88
CNOT3-201ENST00000221232 SERP2Q8N6R1 65 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms