RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 A0A1B0GW54 56 aa7.46□□□□□ -1.22
KNOP1-201ENST00000219837 PRRC2AP48634 2157 aaKnown RBP7.45□□□□□ -1.22
KNOP1-201ENST00000219837 A8MWP4 228 aa7.45□□□□□ -1.22
KNOP1-201ENST00000219837 APLNQ9ULZ1 77 aa7.44□□□□□ -1.22
KNOP1-201ENST00000219837 C4orf26Q17RF5 130 aa7.43□□□□□ -1.22
KNOP1-201ENST00000219837 LINC00304Q8N9R0 145 aa7.43□□□□□ -1.22
KNOP1-201ENST00000219837 TM2D3Q9BRN9 247 aa7.43□□□□□ -1.22
KNOP1-201ENST00000219837 MRPL34Q9BQ48 92 aaKnown RBP7.43□□□□□ -1.22
KNOP1-201ENST00000219837 IGLV1-50A0A075B6I6 118 aa7.42□□□□□ -1.22
KNOP1-201ENST00000219837 SMCPP49901 116 aaPredicted RBP7.42□□□□□ -1.22
KNOP1-201ENST00000219837 LOC101927531A0A1B0GV80 90 aa7.41□□□□□ -1.22
KNOP1-201ENST00000219837 K7EQZ3 153 aa7.41□□□□□ -1.22
KNOP1-201ENST00000219837 SMR3BP02814 79 aaPredicted RBP7.41□□□□□ -1.22
KNOP1-201ENST00000219837 OBSCN-AS1Q96MR7 158 aa7.41□□□□□ -1.22
KNOP1-201ENST00000219837 TRBV7-4A0A0J9YYF1 115 aa7.41□□□□□ -1.22
KNOP1-201ENST00000219837 K7EIL1 84 aa7.4□□□□□ -1.22
KNOP1-201ENST00000219837 PLXNB1O43157 2135 aa7.4□□□□□ -1.22
KNOP1-201ENST00000219837 IGLV6-57P01721 117 aa7.4□□□□□ -1.22
KNOP1-201ENST00000219837 DOPEY2Q9Y3R5 2298 aa7.4□□□□□ -1.22
KNOP1-201ENST00000219837 VPREB1P12018 145 aa7.4□□□□□ -1.23
KNOP1-201ENST00000219837 SSBP3-AS1Q7Z2R9 100 aa7.4□□□□□ -1.23
KNOP1-201ENST00000219837 ZFHX2Q9C0A1 2572 aaPredicted RBP7.4□□□□□ -1.23
KNOP1-201ENST00000219837 CACNA1GO43497 2377 aa7.39□□□□□ -1.23
KNOP1-201ENST00000219837 COA5Q86WW8 74 aa7.37□□□□□ -1.23
KNOP1-201ENST00000219837 KRTAP10-3P60369 221 aa7.37□□□□□ -1.23
KNOP1-201ENST00000219837 IGFL1Q6UW32 110 aa7.36□□□□□ -1.23
KNOP1-201ENST00000219837 PRO0628Q9UI54 55 aa7.36□□□□□ -1.23
KNOP1-201ENST00000219837 C15orf56Q8N910 161 aa7.35□□□□□ -1.23
KNOP1-201ENST00000219837 CSNK1G2-AS1Q8NCQ2 148 aa7.34□□□□□ -1.23
KNOP1-201ENST00000219837 LINC01600Q96MT4 127 aa7.34□□□□□ -1.23
KNOP1-201ENST00000219837 MUC6Q6W4X9 2439 aa7.33□□□□□ -1.24
KNOP1-201ENST00000219837 A0A087WTM6 91 aa7.33□□□□□ -1.24
KNOP1-201ENST00000219837 C8orf17Q9NRJ1 99 aa7.33□□□□□ -1.24
KNOP1-201ENST00000219837 IGLV5-37A0A075B6J1 123 aa7.32□□□□□ -1.24
KNOP1-201ENST00000219837 ZNF861PO60384 105 aa7.32□□□□□ -1.24
KNOP1-201ENST00000219837 KCNQ1DNQ9H478 68 aa7.32□□□□□ -1.24
KNOP1-201ENST00000219837 ANAPC11Q9NYG5 84 aa7.32□□□□□ -1.24
KNOP1-201ENST00000219837 C19orf73Q9NVV2 129 aa7.32□□□□□ -1.24
KNOP1-201ENST00000219837 C9orf129Q5T035 196 aaKnown RBP7.32□□□□□ -1.24
KNOP1-201ENST00000219837 LITAFQ99732 161 aa7.32□□□□□ -1.24
KNOP1-201ENST00000219837 RBM12B-AS1Q9P1G2 102 aa7.32□□□□□ -1.24
KNOP1-201ENST00000219837 PRO0461Q9UI25 63 aa7.32□□□□□ -1.24
KNOP1-201ENST00000219837 SPTAN1Q13813 2472 aaKnown RBP7.31□□□□□ -1.24
KNOP1-201ENST00000219837 WNK1Q9H4A3 2382 aa7.31□□□□□ -1.24
KNOP1-201ENST00000219837 A0A0G2JQZ4 141 aa7.3□□□□□ -1.24
KNOP1-201ENST00000219837 A0A1W2PNN7 141 aa7.3□□□□□ -1.24
KNOP1-201ENST00000219837 A0A1B0GVX0 72 aa7.3□□□□□ -1.24
KNOP1-201ENST00000219837 CRIPTQ9P021 101 aa7.29□□□□□ -1.24
KNOP1-201ENST00000219837 OTOGLQ3ZCN5 2332 aa7.28□□□□□ -1.24
KNOP1-201ENST00000219837 SORL1Q92673 2214 aa7.28□□□□□ -1.24
KNOP1-201ENST00000219837 GVINP1Q7Z2Y8 2422 aa7.28□□□□□ -1.24
KNOP1-201ENST00000219837 IGLV7-43P04211 117 aa7.28□□□□□ -1.24
KNOP1-201ENST00000219837 RIF1Q5UIP0 2472 aaKnown RBP7.28□□□□□ -1.24
KNOP1-201ENST00000219837 MED13LQ71F56 2210 aa7.27□□□□□ -1.25
KNOP1-201ENST00000219837 MIR22HGQ0VDD5 57 aa7.27□□□□□ -1.25
KNOP1-201ENST00000219837 LINC01554Q52M75 96 aa7.27□□□□□ -1.25
KNOP1-201ENST00000219837 LINC00336Q6ZUF6 198 aa7.26□□□□□ -1.25
KNOP1-201ENST00000219837 UQCR11O14957 56 aa7.26□□□□□ -1.25
KNOP1-201ENST00000219837 PRR15Q8IV56 129 aa7.26□□□□□ -1.25
KNOP1-201ENST00000219837 LINC00528Q8N1L1 170 aa7.25□□□□□ -1.25
KNOP1-201ENST00000219837 NOTCH3Q9UM47 2321 aa7.25□□□□□ -1.25
KNOP1-201ENST00000219837 PTPRQQ9UMZ3 2332 aa7.25□□□□□ -1.25
KNOP1-201ENST00000219837 A0A0D9SG42 100 aa7.24□□□□□ -1.25
KNOP1-201ENST00000219837 A8MUN3 132 aa7.24□□□□□ -1.25
KNOP1-201ENST00000219837 Q8N377 158 aa7.24□□□□□ -1.25
KNOP1-201ENST00000219837 RPS28P62857 69 aaKnown RBP7.23□□□□□ -1.25
KNOP1-201ENST00000219837 KLK9Q2XQG4 91 aa7.23□□□□□ -1.25
KNOP1-201ENST00000219837 PLA2G2DQ9UNK4 145 aa7.23□□□□□ -1.25
KNOP1-201ENST00000219837 PSORS1C2Q9UIG4 136 aa7.22□□□□□ -1.25
KNOP1-201ENST00000219837 ERC2-IT1O76042 136 aa7.22□□□□□ -1.25
KNOP1-201ENST00000219837 TLX1NBP0CAT3 122 aa7.21□□□□□ -1.26
KNOP1-201ENST00000219837 CASC10Q5T4H9 136 aa7.21□□□□□ -1.26
KNOP1-201ENST00000219837 PRR34Q9NV39 138 aa7.21□□□□□ -1.26
KNOP1-201ENST00000219837 Q8N1X5 172 aa7.19□□□□□ -1.26
KNOP1-201ENST00000219837 CYP4F30PQ9H0H9 118 aa7.19□□□□□ -1.26
KNOP1-201ENST00000219837 SPRR4Q96PI1 79 aa7.18□□□□□ -1.26
KNOP1-201ENST00000219837 GIG44P09565 113 aaPredicted RBP7.18□□□□□ -1.26
KNOP1-201ENST00000219837 FAM208BQ5VWN6 2430 aa7.18□□□□□ -1.26
KNOP1-201ENST00000219837 IGLV5-48A0A075B6I7 105 aa7.18□□□□□ -1.26
KNOP1-201ENST00000219837 ZNF575Q86XF7 245 aa7.17□□□□□ -1.26
KNOP1-201ENST00000219837 C9orf163Q8N9P6 203 aa7.17□□□□□ -1.26
KNOP1-201ENST00000219837 A0A096LNT2 108 aa7.16□□□□□ -1.26
KNOP1-201ENST00000219837 NBASA2RRP1 2371 aa7.16□□□□□ -1.26
KNOP1-201ENST00000219837 CACNA1HO95180 2353 aa7.15□□□□□ -1.26
KNOP1-201ENST00000219837 NAV3Q8IVL0 2385 aa7.15□□□□□ -1.26
KNOP1-201ENST00000219837 EIF4EBP3O60516 100 aaPredicted RBP7.14□□□□□ -1.27
KNOP1-201ENST00000219837 Q6ZSA8 131 aa7.13□□□□□ -1.27
KNOP1-201ENST00000219837 CDC42SE1Q9NRR8 79 aa7.13□□□□□ -1.27
KNOP1-201ENST00000219837 CREBBPQ92793 2442 aa7.13□□□□□ -1.27
KNOP1-201ENST00000219837 CNBPP62633 177 aaKnown RBP7.13□□□□□ -1.27
KNOP1-201ENST00000219837 LINC00612Q8N6U2 182 aa7.13□□□□□ -1.27
KNOP1-201ENST00000219837 M0R2T5 61 aa7.12□□□□□ -1.27
KNOP1-201ENST00000219837 FAM104AQ969W3 186 aa7.11□□□□□ -1.27
KNOP1-201ENST00000219837 ANKHD1Q8IWZ3 2542 aaKnown RBP7.09□□□□□ -1.27
KNOP1-201ENST00000219837 PRR26Q8N8Z3 221 aa7.09□□□□□ -1.27
KNOP1-201ENST00000219837 KRTAP1-3Q8IUG1 177 aa7.09□□□□□ -1.28
KNOP1-201ENST00000219837 TNP2Q05952 138 aa7.08□□□□□ -1.28
KNOP1-201ENST00000219837 IGLV7-46A0A075B6I9 117 aa7.07□□□□□ -1.28
KNOP1-201ENST00000219837 HIVEP3Q5T1R4 2406 aa7.04□□□□□ -1.28
KNOP1-201ENST00000219837 A0A1W2PNM2 257 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms