RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 TAL2Q16559 108 aa9.32□□□□□ -0.92
UPK3A-201ENST00000216211 BVES-AS1Q5T3Y7 98 aa9.32□□□□□ -0.92
UPK3A-201ENST00000216211 LRP2P98164 4655 aa9.31□□□□□ -0.92
UPK3A-201ENST00000216211 COX7A2LO14548 114 aa9.31□□□□□ -0.92
UPK3A-201ENST00000216211 BATFQ16520 125 aa9.31□□□□□ -0.92
UPK3A-201ENST00000216211 IGLV5-39A0A0G2JS06 123 aa9.3□□□□□ -0.92
UPK3A-201ENST00000216211 SPINK8P0C7L1 97 aa9.3□□□□□ -0.92
UPK3A-201ENST00000216211 COL5A1-AS1Q5SY13 56 aa9.3□□□□□ -0.92
UPK3A-201ENST00000216211 SPINK6Q6UWN8 80 aa9.3□□□□□ -0.92
UPK3A-201ENST00000216211 Q6ZRP5 223 aa9.3□□□□□ -0.92
UPK3A-201ENST00000216211 C5orf38Q86SI9 138 aa9.3□□□□□ -0.92
UPK3A-201ENST00000216211 CAMK2N2Q96S95 79 aa9.3□□□□□ -0.92
UPK3A-201ENST00000216211 A0A1W2PNN7 141 aa9.28□□□□□ -0.92
UPK3A-201ENST00000216211 SRSF9Q13242 221 aaKnown RBP eCLIP9.28□□□□□ -0.92
UPK3A-201ENST00000216211 REG3GQ6UW15 175 aa9.28□□□□□ -0.92
UPK3A-201ENST00000216211 ORAOV1Q8WV07 137 aa9.28□□□□□ -0.92
UPK3A-201ENST00000216211 IGHV3OR16-9A0A0B4J2B5 98 aa9.27□□□□□ -0.93
UPK3A-201ENST00000216211 SMIM1B2RUZ4 78 aa9.27□□□□□ -0.93
UPK3A-201ENST00000216211 SCGB1D4Q6XE38 83 aa9.27□□□□□ -0.93
UPK3A-201ENST00000216211 RNF213Q63HN8 5207 aa9.26□□□□□ -0.93
UPK3A-201ENST00000216211 APOMO95445 188 aa9.26□□□□□ -0.93
UPK3A-201ENST00000216211 KRTAP10-8P60410 259 aa9.26□□□□□ -0.93
UPK3A-201ENST00000216211 RPL18AQ02543 176 aaKnown RBP9.26□□□□□ -0.93
UPK3A-201ENST00000216211 SPAG11BQ08648 103 aa9.26□□□□□ -0.93
UPK3A-201ENST00000216211 CEND1Q8N111 149 aa9.26□□□□□ -0.93
UPK3A-201ENST00000216211 LINC01561Q8N1V8 128 aa9.26□□□□□ -0.93
UPK3A-201ENST00000216211 C2orf48Q96LS8 159 aa9.26□□□□□ -0.93
UPK3A-201ENST00000216211 SPANXB1Q9NS25 103 aaPredicted RBP9.26□□□□□ -0.93
UPK3A-201ENST00000216211 NDUFA12Q9UI09 145 aa9.25□□□□□ -0.93
UPK3A-201ENST00000216211 A0A087WZ39 114 aa9.24□□□□□ -0.93
UPK3A-201ENST00000216211 A0A0J9YXY3 114 aa9.24□□□□□ -0.93
UPK3A-201ENST00000216211 NDUFA1O15239 70 aa9.24□□□□□ -0.93
UPK3A-201ENST00000216211 C9orf116Q5BN46 136 aaPredicted RBP9.24□□□□□ -0.93
UPK3A-201ENST00000216211 HIST1H4GQ99525 98 aa9.24□□□□□ -0.93
UPK3A-201ENST00000216211 A6NDN8 102 aa9.23□□□□□ -0.93
UPK3A-201ENST00000216211 PHF5AQ7RTV0 110 aaKnown RBP9.23□□□□□ -0.93
UPK3A-201ENST00000216211 PSORS1C2Q9UIG4 136 aa9.23□□□□□ -0.93
UPK3A-201ENST00000216211 A0A1B0GV90 55 aa9.21□□□□□ -0.94
UPK3A-201ENST00000216211 TIMM17BO60830 172 aa9.21□□□□□ -0.94
UPK3A-201ENST00000216211 FXYD2P54710 66 aa9.21□□□□□ -0.94
UPK3A-201ENST00000216211 RNF151Q2KHN1 245 aa9.21□□□□□ -0.94
UPK3A-201ENST00000216211 TMEM238C9JI98 176 aa9.2□□□□□ -0.94
UPK3A-201ENST00000216211 ZNF625Q96I27 306 aaPredicted RBP9.2□□□□□ -0.94
UPK3A-201ENST00000216211 TAX1BP3O14907 124 aa9.19□□□□□ -0.94
UPK3A-201ENST00000216211 HERV-K104P63124 156 aa9.19□□□□□ -0.94
UPK3A-201ENST00000216211 C1orf137Q5JT78 98 aa9.19□□□□□ -0.94
UPK3A-201ENST00000216211 C10orf25Q5T742 122 aa9.19□□□□□ -0.94
UPK3A-201ENST00000216211 COX7B2Q8TF08 81 aa9.19□□□□□ -0.94
UPK3A-201ENST00000216211 LITAFQ99732 161 aa9.19□□□□□ -0.94
UPK3A-201ENST00000216211 UNQ6190/PRO20217Q6UXQ8 127 aa9.18□□□□□ -0.94
UPK3A-201ENST00000216211 Q6ZVH6 145 aa9.18□□□□□ -0.94
UPK3A-201ENST00000216211 SPANXDQ9BXN6 97 aa9.18□□□□□ -0.94
UPK3A-201ENST00000216211 SPANXCQ9NY87 97 aa9.18□□□□□ -0.94
UPK3A-201ENST00000216211 A0A1B0GWB2 263 aa9.17□□□□□ -0.94
UPK3A-201ENST00000216211 FAM168BA1KXE4 195 aa9.17□□□□□ -0.94
UPK3A-201ENST00000216211 F8WDY8 70 aa9.17□□□□□ -0.94
UPK3A-201ENST00000216211 SMIM13P0DJ93 91 aa9.17□□□□□ -0.94
UPK3A-201ENST00000216211 SFTA2Q6UW10 78 aa9.17□□□□□ -0.94
UPK3A-201ENST00000216211 C6orf48Q9UBA6 75 aa9.17□□□□□ -0.94
UPK3A-201ENST00000216211 TMEM238LA0A1B0GVL6 79 aa9.16□□□□□ -0.94
UPK3A-201ENST00000216211 A6NJY4 79 aa9.16□□□□□ -0.94
UPK3A-201ENST00000216211 TLX1NBP0CAT3 122 aa9.15□□□□□ -0.94
UPK3A-201ENST00000216211 FAM19A5Q7Z5A7 132 aaPredicted RBP9.15□□□□□ -0.94
UPK3A-201ENST00000216211 Q8IZM0 81 aa9.15□□□□□ -0.94
UPK3A-201ENST00000216211 NHP2Q9NX24 153 aaKnown RBP9.15□□□□□ -0.94
UPK3A-201ENST00000216211 KIAA0087Q14695 138 aa9.14□□□□□ -0.95
UPK3A-201ENST00000216211 GAGE2EQ4V326 116 aa9.14□□□□□ -0.95
UPK3A-201ENST00000216211 ADAMTSL4-AS1Q5T5F5 129 aa9.14□□□□□ -0.95
UPK3A-201ENST00000216211 KRTAP11-1Q8IUC1 163 aa9.14□□□□□ -0.95
UPK3A-201ENST00000216211 MUSTN1Q8IVN3 82 aa9.14□□□□□ -0.95
UPK3A-201ENST00000216211 TOMM7Q9P0U1 55 aa9.14□□□□□ -0.95
UPK3A-201ENST00000216211 GAGE2DQ9UEU5 116 aa9.14□□□□□ -0.95
UPK3A-201ENST00000216211 C9orf118A6NHY6 69 aa9.13□□□□□ -0.95
UPK3A-201ENST00000216211 IGLV7-43P04211 117 aa9.13□□□□□ -0.95
UPK3A-201ENST00000216211 IFITM1P13164 125 aa9.13□□□□□ -0.95
UPK3A-201ENST00000216211 RPL24P83731 157 aaKnown RBP9.13□□□□□ -0.95
UPK3A-201ENST00000216211 PRSS2P07478 247 aa9.12□□□□□ -0.95
UPK3A-201ENST00000216211 C6orf226Q5I0X4 101 aa9.12□□□□□ -0.95
UPK3A-201ENST00000216211 PPDPFQ9H3Y8 114 aa9.12□□□□□ -0.95
UPK3A-201ENST00000216211 LPAP08519 4548 aa9.12□□□□□ -0.95
UPK3A-201ENST00000216211 MEIG1Q5JSS6 88 aa9.11□□□□□ -0.95
UPK3A-201ENST00000216211 DIRC1Q969H9 104 aa9.11□□□□□ -0.95
UPK3A-201ENST00000216211 CXCL5P42830 114 aa9.1□□□□□ -0.95
UPK3A-201ENST00000216211 C2orf82Q6UX34 121 aa9.1□□□□□ -0.95
UPK3A-201ENST00000216211 KRTAP7-1Q8IUC3 87 aa9.1□□□□□ -0.95
UPK3A-201ENST00000216211 COPS9Q8WXC6 57 aa9.1□□□□□ -0.95
UPK3A-201ENST00000216211 RAB37Q96AX2 223 aa9.1□□□□□ -0.95
UPK3A-201ENST00000216211 TRBV30A0A0K0K1B3 111 aa9.09□□□□□ -0.95
UPK3A-201ENST00000216211 A4D1N5 150 aa9.09□□□□□ -0.95
UPK3A-201ENST00000216211 H0Y9J4 135 aa9.09□□□□□ -0.95
UPK3A-201ENST00000216211 K7ERJ3 54 aa9.09□□□□□ -0.95
UPK3A-201ENST00000216211 M0QXV9 152 aa9.09□□□□□ -0.95
UPK3A-201ENST00000216211 PRR26Q8N8Z3 221 aa9.09□□□□□ -0.95
UPK3A-201ENST00000216211 CFC1BP0CG36 223 aa9.08□□□□□ -0.96
UPK3A-201ENST00000216211 CFC1P0CG37 223 aa9.08□□□□□ -0.96
UPK3A-201ENST00000216211 UBE2BP63146 152 aa9.08□□□□□ -0.96
UPK3A-201ENST00000216211 A0A0B4J2C4 111 aa9.07□□□□□ -0.96
UPK3A-201ENST00000216211 CKS1BP61024 79 aa9.07□□□□□ -0.96
UPK3A-201ENST00000216211 C9orf129Q5T035 196 aaKnown RBP9.07□□□□□ -0.96
UPK3A-201ENST00000216211 LINC00308Q8TCZ7 52 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms