RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 DIRC1Q969H9 104 aa10.64□□□□□ -0.71
MRPL28-201ENST00000199706 MYMXA0A1B0GTQ4 84 aa10.63□□□□□ -0.71
MRPL28-201ENST00000199706 SYS1-DBNDD2H3BUS1 97 aa10.63□□□□□ -0.71
MRPL28-201ENST00000199706 LEPROTO15243 131 aa10.63□□□□□ -0.71
MRPL28-201ENST00000199706 NKAPP1Q8N9T2 125 aa10.63□□□□□ -0.71
MRPL28-201ENST00000199706 NDUFA12Q9UI09 145 aa10.63□□□□□ -0.71
MRPL28-201ENST00000199706 NMUP48645 174 aa10.62□□□□□ -0.71
MRPL28-201ENST00000199706 RPL24P83731 157 aaKnown RBP10.62□□□□□ -0.71
MRPL28-201ENST00000199706 TNXBP22105 4242 aa10.61□□□□□ -0.71
MRPL28-201ENST00000199706 ATP6V1G1O75348 118 aa10.61□□□□□ -0.71
MRPL28-201ENST00000199706 VPREB1P12018 145 aa10.61□□□□□ -0.71
MRPL28-201ENST00000199706 LINC01545Q5VT33 79 aa10.61□□□□□ -0.71
MRPL28-201ENST00000199706 PET117Q6UWS5 81 aa10.61□□□□□ -0.71
MRPL28-201ENST00000199706 H0Y9J4 135 aa10.6□□□□□ -0.71
MRPL28-201ENST00000199706 J3QQQ9 107 aa10.6□□□□□ -0.71
MRPL28-201ENST00000199706 LINC00167Q96N53 147 aa10.6□□□□□ -0.71
MRPL28-201ENST00000199706 LINC00158P58513 81 aa10.59□□□□□ -0.71
MRPL28-201ENST00000199706 TSPEAR-AS2P59090 65 aa10.59□□□□□ -0.71
MRPL28-201ENST00000199706 PMCHL2Q9BQD1 86 aa10.59□□□□□ -0.71
MRPL28-201ENST00000199706 BCE1O60756 84 aa10.58□□□□□ -0.72
MRPL28-201ENST00000199706 E9PLD3 99 aa10.57□□□□□ -0.72
MRPL28-201ENST00000199706 ZNF861PO60384 105 aa10.57□□□□□ -0.72
MRPL28-201ENST00000199706 MEIG1Q5JSS6 88 aa10.57□□□□□ -0.72
MRPL28-201ENST00000199706 SMIM13P0DJ93 91 aa10.56□□□□□ -0.72
MRPL28-201ENST00000199706 LOC107984156A0A0G2JMH3 177 aa10.55□□□□□ -0.72
MRPL28-201ENST00000199706 LGALS3P17931 250 aaKnown RBP10.55□□□□□ -0.72
MRPL28-201ENST00000199706 ARL17AQ8IVW1 177 aa10.55□□□□□ -0.72
MRPL28-201ENST00000199706 IGLV1-50A0A075B6I6 118 aa10.54□□□□□ -0.72
MRPL28-201ENST00000199706 C3orf79P0CE67 100 aa10.54□□□□□ -0.72
MRPL28-201ENST00000199706 RPL28P46779 137 aaKnown RBP10.54□□□□□ -0.72
MRPL28-201ENST00000199706 AKR1D1P51857 326 aa10.54□□□□□ -0.72
MRPL28-201ENST00000199706 KRTAP10-8P60410 259 aa10.54□□□□□ -0.72
MRPL28-201ENST00000199706 MIR7-3HGQ8N6C7 128 aa10.54□□□□□ -0.72
MRPL28-201ENST00000199706 IGKV2D-26A0A0A0MRZ7 120 aa10.53□□□□□ -0.72
MRPL28-201ENST00000199706 GAGE10A6NGK3 116 aa10.53□□□□□ -0.72
MRPL28-201ENST00000199706 RPL37AP8A6NKH3 93 aa10.53□□□□□ -0.72
MRPL28-201ENST00000199706 Q8NDZ9 215 aa10.53□□□□□ -0.72
MRPL28-201ENST00000199706 KRTAP13-1Q8IUC0 172 aa10.52□□□□□ -0.73
MRPL28-201ENST00000199706 A0A0U1RRA0 63 aa10.51□□□□□ -0.73
MRPL28-201ENST00000199706 C20orf202A1L168 122 aa10.51□□□□□ -0.73
MRPL28-201ENST00000199706 M0R378 163 aa10.5□□□□□ -0.73
MRPL28-201ENST00000199706 KRTAP1-4P0C5Y4 121 aa10.5□□□□□ -0.73
MRPL28-201ENST00000199706 BOD1L2Q8IYS8 172 aa10.5□□□□□ -0.73
MRPL28-201ENST00000199706 HMCN2Q8NDA2 5059 aa10.5□□□□□ -0.73
MRPL28-201ENST00000199706 IGKV2-28A0A075B6P5 120 aa10.49□□□□□ -0.73
MRPL28-201ENST00000199706 IGKV2D-28P01615 120 aa10.49□□□□□ -0.73
MRPL28-201ENST00000199706 KRTDAPP60985 99 aa10.49□□□□□ -0.73
MRPL28-201ENST00000199706 TMEM126AQ9H061 195 aa10.48□□□□□ -0.73
MRPL28-201ENST00000199706 A0A0J9YXY3 114 aa10.47□□□□□ -0.73
MRPL28-201ENST00000199706 TRBV10-2A0A0K0K1G8 114 aa10.47□□□□□ -0.73
MRPL28-201ENST00000199706 TIMM17BO60830 172 aa10.46□□□□□ -0.73
MRPL28-201ENST00000199706 PRYO14603 147 aa10.45□□□□□ -0.74
MRPL28-201ENST00000199706 NDUFC2O95298 119 aa10.45□□□□□ -0.74
MRPL28-201ENST00000199706 RPL13AP40429 203 aaKnown RBP10.45□□□□□ -0.74
MRPL28-201ENST00000199706 UBE2AP49459 152 aa10.45□□□□□ -0.74
MRPL28-201ENST00000199706 HIST3H2BBQ8N257 126 aa10.45□□□□□ -0.74
MRPL28-201ENST00000199706 MIEN1Q9BRT3 115 aa10.45□□□□□ -0.74
MRPL28-201ENST00000199706 TMEM238C9JI98 176 aa10.43□□□□□ -0.74
MRPL28-201ENST00000199706 DAND5Q8N907 189 aa10.43□□□□□ -0.74
MRPL28-201ENST00000199706 HIST1H2BLQ99880 126 aa10.43□□□□□ -0.74
MRPL28-201ENST00000199706 KCNQ1DNQ9H478 68 aa10.43□□□□□ -0.74
MRPL28-201ENST00000199706 SPANXB1Q9NS25 103 aaPredicted RBP10.43□□□□□ -0.74
MRPL28-201ENST00000199706 SPRR1AP35321 89 aa10.42□□□□□ -0.74
MRPL28-201ENST00000199706 SNRPEP62304 92 aaKnown RBP10.42□□□□□ -0.74
MRPL28-201ENST00000199706 S100A6P06703 90 aa10.41□□□□□ -0.74
MRPL28-201ENST00000199706 S100A2P29034 98 aa10.41□□□□□ -0.74
MRPL28-201ENST00000199706 LINC00337Q8N6G1 96 aa10.41□□□□□ -0.74
MRPL28-201ENST00000199706 PRR26Q8N8Z3 221 aa10.41□□□□□ -0.74
MRPL28-201ENST00000199706 LITAFQ99732 161 aa10.41□□□□□ -0.74
MRPL28-201ENST00000199706 ZNF815PA8K554 130 aa10.4□□□□□ -0.74
MRPL28-201ENST00000199706 NCR3O14931 201 aa10.4□□□□□ -0.74
MRPL28-201ENST00000199706 S100A12P80511 92 aa10.4□□□□□ -0.74
MRPL28-201ENST00000199706 ADAMTSL4-AS1Q5T5F5 129 aa10.4□□□□□ -0.74
MRPL28-201ENST00000199706 FAM19A1Q7Z5A9 133 aa10.4□□□□□ -0.74
MRPL28-201ENST00000199706 PRLHP81277 87 aa10.38□□□□□ -0.75
MRPL28-201ENST00000199706 FAM229BQ4G0N7 80 aa10.38□□□□□ -0.75
MRPL28-201ENST00000199706 PPDPFQ9H3Y8 114 aa10.38□□□□□ -0.75
MRPL28-201ENST00000199706 TRBV10-3A0A0K0K1G6 114 aa10.37□□□□□ -0.75
MRPL28-201ENST00000199706 KRTAP4-16G5E9R7 235 aaPredicted RBP10.37□□□□□ -0.75
MRPL28-201ENST00000199706 SOSTDC1Q6X4U4 206 aa10.37□□□□□ -0.75
MRPL28-201ENST00000199706 IGLV6-57P01721 117 aa10.36□□□□□ -0.75
MRPL28-201ENST00000199706 ANKRD39Q53RE8 183 aa10.36□□□□□ -0.75
MRPL28-201ENST00000199706 SPANXCQ9NY87 97 aa10.36□□□□□ -0.75
MRPL28-201ENST00000199706 DDTP30046 118 aa10.35□□□□□ -0.75
MRPL28-201ENST00000199706 LINC00308Q8TCZ7 52 aa10.35□□□□□ -0.75
MRPL28-201ENST00000199706 CBY1Q9Y3M2 126 aa10.35□□□□□ -0.75
MRPL28-201ENST00000199706 CRYGAP11844 174 aa10.34□□□□□ -0.75
MRPL28-201ENST00000199706 TTTY13Q9BZ97 58 aa10.34□□□□□ -0.75
MRPL28-201ENST00000199706 C5orf52A6NGY3 159 aa10.33□□□□□ -0.76
MRPL28-201ENST00000199706 EIF4EBP3O60516 100 aaPredicted RBP10.33□□□□□ -0.76
MRPL28-201ENST00000199706 Q6ZVH6 145 aa10.33□□□□□ -0.76
MRPL28-201ENST00000199706 ATOH7Q8N100 152 aa10.33□□□□□ -0.76
MRPL28-201ENST00000199706 COPS9Q8WXC6 57 aa10.33□□□□□ -0.76
MRPL28-201ENST00000199706 SPANXDQ9BXN6 97 aa10.33□□□□□ -0.76
MRPL28-201ENST00000199706 ETDCA0A1B0GVM5 59 aa10.32□□□□□ -0.76
MRPL28-201ENST00000199706 S100A7L2Q5SY68 101 aa10.32□□□□□ -0.76
MRPL28-201ENST00000199706 A0A087X002 238 aa10.31□□□□□ -0.76
MRPL28-201ENST00000199706 SCGB1D4Q6XE38 83 aa10.31□□□□□ -0.76
MRPL28-201ENST00000199706 ZNF706Q9Y5V0 76 aaPredicted RBP10.31□□□□□ -0.76
MRPL28-201ENST00000199706 IFITM1P13164 125 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms