RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 TEN1Q86WV5 123 aa12.24□□□□□ -0.45
CTSA-201ENST00000191018 ANKRD29Q8N6D5 301 aa12.24□□□□□ -0.45
CTSA-201ENST00000191018 CASC10Q5T4H9 136 aa12.23□□□□□ -0.45
CTSA-201ENST00000191018 PRKDCP78527 4128 aaKnown RBP12.23□□□□□ -0.45
CTSA-201ENST00000191018 CSMD3Q7Z407 3707 aa12.22□□□□□ -0.45
CTSA-201ENST00000191018 NUPR2A6NF83 97 aa12.22□□□□□ -0.45
CTSA-201ENST00000191018 KRTAP21-3Q3LHN1 58 aa12.22□□□□□ -0.45
CTSA-201ENST00000191018 FAM218AQ96MZ4 157 aa12.22□□□□□ -0.45
CTSA-201ENST00000191018 TMEM126AQ9H061 195 aa12.22□□□□□ -0.45
CTSA-201ENST00000191018 NDUFC2-KCTD14E9PQ53 114 aa12.21□□□□□ -0.45
CTSA-201ENST00000191018 TRACP01848 142 aa12.21□□□□□ -0.45
CTSA-201ENST00000191018 SYCNQ0VAF6 134 aa12.21□□□□□ -0.45
CTSA-201ENST00000191018 USP17L23D6RBM5 183 aa12.21□□□□□ -0.46
CTSA-201ENST00000191018 H3BT86 120 aa12.21□□□□□ -0.46
CTSA-201ENST00000191018 KRTAP1-5Q9BYS1 174 aa12.21□□□□□ -0.46
CTSA-201ENST00000191018 MEGF8Q7Z7M0 2845 aa12.2□□□□□ -0.46
CTSA-201ENST00000191018 H0YGX0 51 aa12.2□□□□□ -0.46
CTSA-201ENST00000191018 NCR3O14931 201 aa12.2□□□□□ -0.46
CTSA-201ENST00000191018 UBE2DNLQ8IWF7 75 aa12.2□□□□□ -0.46
CTSA-201ENST00000191018 XAGE1AQ9HD64 81 aa12.2□□□□□ -0.46
CTSA-201ENST00000191018 LYSTQ99698 3801 aa12.19□□□□□ -0.46
CTSA-201ENST00000191018 CARD19Q96LW7 228 aa12.18□□□□□ -0.46
CTSA-201ENST00000191018 PPDPFLQ8WWR9 84 aa12.17□□□□□ -0.46
CTSA-201ENST00000191018 SLPIP03973 132 aa12.17□□□□□ -0.46
CTSA-201ENST00000191018 RNF151Q2KHN1 245 aa12.17□□□□□ -0.46
CTSA-201ENST00000191018 Q6ZRP5 223 aa12.17□□□□□ -0.46
CTSA-201ENST00000191018 J3QR89 54 aa12.16□□□□□ -0.46
CTSA-201ENST00000191018 IGLV6-57P01721 117 aa12.15□□□□□ -0.46
CTSA-201ENST00000191018 S100A7L2Q5SY68 101 aa12.15□□□□□ -0.46
CTSA-201ENST00000191018 PLECQ15149 4684 aaKnown RBP12.15□□□□□ -0.47
CTSA-201ENST00000191018 RPL18AQ02543 176 aaKnown RBP12.14□□□□□ -0.47
CTSA-201ENST00000191018 DNAH7Q8WXX0 4024 aa12.14□□□□□ -0.47
CTSA-201ENST00000191018 A0A087WYN8 130 aa12.14□□□□□ -0.47
CTSA-201ENST00000191018 TLX1NBP0CAT3 122 aa12.14□□□□□ -0.47
CTSA-201ENST00000191018 VPREB1P12018 145 aa12.14□□□□□ -0.47
CTSA-201ENST00000191018 GAGE2EQ4V326 116 aa12.12□□□□□ -0.47
CTSA-201ENST00000191018 GAGE2DQ9UEU5 116 aa12.12□□□□□ -0.47
CTSA-201ENST00000191018 LECT2O14960 151 aa12.1□□□□□ -0.47
CTSA-201ENST00000191018 VPS25Q9BRG1 176 aa12.1□□□□□ -0.47
CTSA-201ENST00000191018 C6orf99Q4VX62 202 aa12.1□□□□□ -0.47
CTSA-201ENST00000191018 C9orf129Q5T035 196 aaKnown RBP12.1□□□□□ -0.47
CTSA-201ENST00000191018 TEX49A0A1B0GTD5 131 aa12.08□□□□□ -0.48
CTSA-201ENST00000191018 STARD9Q9P2P6 4700 aa12.08□□□□□ -0.48
CTSA-201ENST00000191018 TRBV10-3A0A0K0K1G6 114 aa12.08□□□□□ -0.48
CTSA-201ENST00000191018 A0A1B0GX51 115 aa12.08□□□□□ -0.48
CTSA-201ENST00000191018 BAALC-AS2P0C853 105 aa12.08□□□□□ -0.48
CTSA-201ENST00000191018 TENM2Q9NT68 2774 aa12.07□□□□□ -0.48
CTSA-201ENST00000191018 M0R378 163 aa12.07□□□□□ -0.48
CTSA-201ENST00000191018 DNAL4O96015 105 aa12.07□□□□□ -0.48
CTSA-201ENST00000191018 C22orf24Q9Y442 160 aa12.07□□□□□ -0.48
CTSA-201ENST00000191018 NBDYA0A0U1RRE5 68 aa12.06□□□□□ -0.48
CTSA-201ENST00000191018 TTC32Q5I0X7 151 aa12.06□□□□□ -0.48
CTSA-201ENST00000191018 DNAH10Q8IVF4 4471 aa12.05□□□□□ -0.48
CTSA-201ENST00000191018 LINC00167Q96N53 147 aa12.05□□□□□ -0.48
CTSA-201ENST00000191018 TRAV23DV6A0A075B6W5 121 aa12.04□□□□□ -0.48
CTSA-201ENST00000191018 PLA2G2DQ9UNK4 145 aa12.04□□□□□ -0.48
CTSA-201ENST00000191018 PSCAO43653 123 aa12.04□□□□□ -0.48
CTSA-201ENST00000191018 Q8N814 137 aa12.04□□□□□ -0.48
CTSA-201ENST00000191018 LINC00575Q6W349 94 aa12.02□□□□□ -0.49
CTSA-201ENST00000191018 CNBPP62633 177 aaKnown RBP12.01□□□□□ -0.49
CTSA-201ENST00000191018 SERTAD4-AS1Q5TG53 156 aa12.01□□□□□ -0.49
CTSA-201ENST00000191018 VPS13DQ5THJ4 4388 aa12.01□□□□□ -0.49
CTSA-201ENST00000191018 LOC107984640A0A0U1RRK4 108 aa12□□□□□ -0.49
CTSA-201ENST00000191018 ZNF73O43830 326 aaPredicted RBP12□□□□□ -0.49
CTSA-201ENST00000191018 DIRC1Q969H9 104 aa12□□□□□ -0.49
CTSA-201ENST00000191018 CBY1Q9Y3M2 126 aa12□□□□□ -0.49
CTSA-201ENST00000191018 Q6ZRN7 208 aaPredicted RBP11.99□□□□□ -0.49
CTSA-201ENST00000191018 IGLV5-37A0A075B6J1 123 aa11.98□□□□□ -0.49
CTSA-201ENST00000191018 C14orf177Q52M58 125 aa11.98□□□□□ -0.49
CTSA-201ENST00000191018 ORMDL1Q9P0S3 153 aa11.98□□□□□ -0.49
CTSA-201ENST00000191018 TRBV7-6A0A0J9YX20 115 aa11.97□□□□□ -0.49
CTSA-201ENST00000191018 GAGE2BQ13066 116 aa11.97□□□□□ -0.49
CTSA-201ENST00000191018 NKAPP1Q8N9T2 125 aa11.97□□□□□ -0.49
CTSA-201ENST00000191018 LRCOL1A6NCL2 159 aa11.96□□□□□ -0.49
CTSA-201ENST00000191018 CDIP1Q9H305 208 aa11.96□□□□□ -0.49
CTSA-201ENST00000191018 SNCGO76070 127 aa11.95□□□□□ -0.5
CTSA-201ENST00000191018 KRTAP7-1Q8IUC3 87 aa11.95□□□□□ -0.5
CTSA-201ENST00000191018 C7orf33Q8WU49 177 aa11.95□□□□□ -0.5
CTSA-201ENST00000191018 FBN3Q75N90 2809 aa11.95□□□□□ -0.5
CTSA-201ENST00000191018 hADV29S1A0JD25 119 aa11.95□□□□□ -0.5
CTSA-201ENST00000191018 FAM168BA1KXE4 195 aa11.95□□□□□ -0.5
CTSA-201ENST00000191018 ELOF1P60002 83 aaKnown RBP11.95□□□□□ -0.5
CTSA-201ENST00000191018 KCNQ1DNQ9H478 68 aa11.94□□□□□ -0.5
CTSA-201ENST00000191018 COX7BP24311 80 aa11.93□□□□□ -0.5
CTSA-201ENST00000191018 OBSCN-AS1Q96MR7 158 aa11.93□□□□□ -0.5
CTSA-201ENST00000191018 C16orf90A8MZG2 172 aa11.91□□□□□ -0.5
CTSA-201ENST00000191018 TMEM256-PLSCR3K7ERE1 68 aa11.91□□□□□ -0.5
CTSA-201ENST00000191018 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.9□□□□□ -0.5
CTSA-201ENST00000191018 FAM240AA0A1B0GVK7 77 aa11.9□□□□□ -0.5
CTSA-201ENST00000191018 INAFM2P0DMQ5 153 aa11.9□□□□□ -0.5
CTSA-201ENST00000191018 A0A096LNI7 61 aa11.89□□□□□ -0.51
CTSA-201ENST00000191018 LINC00528Q8N1L1 170 aa11.89□□□□□ -0.51
CTSA-201ENST00000191018 M0R2N4 97 aa11.89□□□□□ -0.51
CTSA-201ENST00000191018 IGLV1-50A0A075B6I6 118 aa11.88□□□□□ -0.51
CTSA-201ENST00000191018 Q6ZR54 194 aa11.88□□□□□ -0.51
CTSA-201ENST00000191018 Q6ZQY7 126 aa11.87□□□□□ -0.51
CTSA-201ENST00000191018 FAM19A5Q7Z5A7 132 aaPredicted RBP11.87□□□□□ -0.51
CTSA-201ENST00000191018 MRPL55Q7Z7F7 128 aaKnown RBP11.87□□□□□ -0.51
CTSA-201ENST00000191018 C9orf163Q8N9P6 203 aa11.87□□□□□ -0.51
CTSA-201ENST00000191018 SIGMAR1Q99720 223 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms