RNA–Protein interactions for RNA: ENST00000006015.3

HOXA11-201, Transcript of homeobox A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA11, Length 2,295 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-201ENST00000006015 NBEAL2Q6ZNJ1 2754 aa13.54□□□□□ -0.24
HOXA11-201ENST00000006015 IGLV1-51P01701 117 aa13.53□□□□□ -0.24
HOXA11-201ENST00000006015 C6orf99Q4VX62 202 aa13.53□□□□□ -0.24
HOXA11-201ENST00000006015 C19orf73Q9NVV2 129 aa13.53□□□□□ -0.24
HOXA11-201ENST00000006015 KRTAP10-3P60369 221 aa13.52□□□□□ -0.24
HOXA11-201ENST00000006015 LINC00575Q6W349 94 aa13.52□□□□□ -0.24
HOXA11-201ENST00000006015 LINC01547P58512 204 aaPredicted RBP13.52□□□□□ -0.25
HOXA11-201ENST00000006015 C6orf223Q8N319 242 aa13.51□□□□□ -0.25
HOXA11-201ENST00000006015 A0A1B0GUV1 79 aa13.5□□□□□ -0.25
HOXA11-201ENST00000006015 CMC4P56277 68 aaPredicted RBP13.5□□□□□ -0.25
HOXA11-201ENST00000006015 Q6ZVQ6 151 aa13.48□□□□□ -0.25
HOXA11-201ENST00000006015 LAMTOR3Q9UHA4 124 aa13.48□□□□□ -0.25
HOXA11-201ENST00000006015 CXCL6P80162 114 aa13.47□□□□□ -0.25
HOXA11-201ENST00000006015 HAMPP81172 84 aa13.47□□□□□ -0.25
HOXA11-201ENST00000006015 KIAA0087Q14695 138 aa13.47□□□□□ -0.25
HOXA11-201ENST00000006015 TENM1Q9UKZ4 2725 aa13.47□□□□□ -0.25
HOXA11-201ENST00000006015 CSNK1G2-AS1Q8NCQ2 148 aa13.46□□□□□ -0.25
HOXA11-201ENST00000006015 PDE6GP18545 87 aa13.46□□□□□ -0.26
HOXA11-201ENST00000006015 CLPSL2Q6UWE3 100 aa13.46□□□□□ -0.26
HOXA11-201ENST00000006015 IGHV4-28A0A0C4DH34 117 aa13.45□□□□□ -0.26
HOXA11-201ENST00000006015 PRO0628Q9UI54 55 aa13.45□□□□□ -0.26
HOXA11-201ENST00000006015 TRAV10A0A0B4J240 114 aa13.44□□□□□ -0.26
HOXA11-201ENST00000006015 SPATA3Q8NHX4 192 aa13.44□□□□□ -0.26
HOXA11-201ENST00000006015 TRRAPQ9Y4A5 3859 aa13.44□□□□□ -0.26
HOXA11-201ENST00000006015 M0R2N4 97 aa13.44□□□□□ -0.26
HOXA11-201ENST00000006015 H3BQ85 93 aa13.43□□□□□ -0.26
HOXA11-201ENST00000006015 C9orf66Q5T8R8 295 aa13.43□□□□□ -0.26
HOXA11-201ENST00000006015 SMIM26A0A096LP01 95 aa13.43□□□□□ -0.26
HOXA11-201ENST00000006015 Q8NDZ9 215 aa13.43□□□□□ -0.26
HOXA11-201ENST00000006015 SNURFQ9Y675 71 aa13.43□□□□□ -0.26
HOXA11-201ENST00000006015 CD164L2Q6UWJ8 174 aa13.42□□□□□ -0.26
HOXA11-201ENST00000006015 RMI2Q96E14 147 aa13.42□□□□□ -0.26
HOXA11-201ENST00000006015 F8WEM9 126 aa13.42□□□□□ -0.26
HOXA11-201ENST00000006015 NDUFC1O43677 76 aa13.42□□□□□ -0.26
HOXA11-201ENST00000006015 GYPEP15421 78 aa13.42□□□□□ -0.26
HOXA11-201ENST00000006015 C9orf116Q5BN46 136 aaPredicted RBP13.4□□□□□ -0.26
HOXA11-201ENST00000006015 LINC00336Q6ZUF6 198 aa13.4□□□□□ -0.26
HOXA11-201ENST00000006015 NSD1Q96L73 2696 aaPredicted RBP13.4□□□□□ -0.26
HOXA11-201ENST00000006015 ATP5EP56381 51 aaPredicted RBP13.39□□□□□ -0.27
HOXA11-201ENST00000006015 INAFM1C9JVW0 142 aa13.38□□□□□ -0.27
HOXA11-201ENST00000006015 Q8N3U1 123 aa13.38□□□□□ -0.27
HOXA11-201ENST00000006015 MUC7Q8TAX7 377 aa13.38□□□□□ -0.27
HOXA11-201ENST00000006015 DEFB130BP0DP73 79 aa13.37□□□□□ -0.27
HOXA11-201ENST00000006015 DEFB130AP0DP74 79 aa13.37□□□□□ -0.27
HOXA11-201ENST00000006015 Q6ZQY7 126 aa13.37□□□□□ -0.27
HOXA11-201ENST00000006015 LINC00269Q8N2A0 174 aa13.37□□□□□ -0.27
HOXA11-201ENST00000006015 CHCHD10Q8WYQ3 142 aaPredicted RBP13.37□□□□□ -0.27
HOXA11-201ENST00000006015 FP248Q71RG6 208 aaPredicted RBP13.36□□□□□ -0.27
HOXA11-201ENST00000006015 IGLV6-57P01721 117 aa13.36□□□□□ -0.27
HOXA11-201ENST00000006015 HIVEP1P15822 2718 aa13.36□□□□□ -0.27
HOXA11-201ENST00000006015 LINC00612Q8N6U2 182 aa13.35□□□□□ -0.27
HOXA11-201ENST00000006015 ATRQ13535 2644 aa13.35□□□□□ -0.27
HOXA11-201ENST00000006015 TRBV7-4A0A0J9YYF1 115 aa13.34□□□□□ -0.27
HOXA11-201ENST00000006015 TM2D3Q9BRN9 247 aa13.33□□□□□ -0.28
HOXA11-201ENST00000006015 TRBV7-6A0A0J9YX20 115 aa13.32□□□□□ -0.28
HOXA11-201ENST00000006015 IGLV10-54A0A075B6I4 117 aa13.31□□□□□ -0.28
HOXA11-201ENST00000006015 MIFP14174 115 aa13.31□□□□□ -0.28
HOXA11-201ENST00000006015 PRO0255Q9UI72 69 aa13.31□□□□□ -0.28
HOXA11-201ENST00000006015 REG3AQ06141 175 aa13.3□□□□□ -0.28
HOXA11-201ENST00000006015 A0A096LPF7 62 aa13.29□□□□□ -0.28
HOXA11-201ENST00000006015 NREPQ16612 68 aa13.29□□□□□ -0.28
HOXA11-201ENST00000006015 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.29□□□□□ -0.28
HOXA11-201ENST00000006015 ANGP03950 147 aaKnown RBP13.28□□□□□ -0.28
HOXA11-201ENST00000006015 SCXQ7RTU7 201 aa13.28□□□□□ -0.28
HOXA11-201ENST00000006015 DEFB4AO15263 64 aa13.28□□□□□ -0.28
HOXA11-201ENST00000006015 ERC2-IT1O76042 136 aa13.28□□□□□ -0.28
HOXA11-201ENST00000006015 DIRC1Q969H9 104 aa13.28□□□□□ -0.28
HOXA11-201ENST00000006015 SPAG11BQ08648 103 aa13.27□□□□□ -0.28
HOXA11-201ENST00000006015 C10orf25Q5T742 122 aa13.27□□□□□ -0.28
HOXA11-201ENST00000006015 A0A0J9YWU9 116 aa13.27□□□□□ -0.29
HOXA11-201ENST00000006015 IGHV4-30-4P0DP06 118 aa13.27□□□□□ -0.29
HOXA11-201ENST00000006015 UNQ6190/PRO20217Q6UXQ8 127 aa13.27□□□□□ -0.29
HOXA11-201ENST00000006015 X6R8D5 127 aa13.26□□□□□ -0.29
HOXA11-201ENST00000006015 TMEM254Q8TBM7 123 aa13.25□□□□□ -0.29
HOXA11-201ENST00000006015 TEP1Q99973 2627 aaKnown RBP13.25□□□□□ -0.29
HOXA11-201ENST00000006015 C1orf43Q9BWL3 253 aa13.25□□□□□ -0.29
HOXA11-201ENST00000006015 BPY2O14599 106 aa13.24□□□□□ -0.29
HOXA11-201ENST00000006015 LINC00474Q9P2X8 69 aa13.24□□□□□ -0.29
HOXA11-201ENST00000006015 CYSRT1A8MQ03 144 aa13.22□□□□□ -0.29
HOXA11-201ENST00000006015 COX7BP24311 80 aa13.22□□□□□ -0.29
HOXA11-201ENST00000006015 DEFB135Q30KP9 77 aa13.22□□□□□ -0.29
HOXA11-201ENST00000006015 ZNF73O43830 326 aaPredicted RBP13.2□□□□□ -0.3
HOXA11-201ENST00000006015 ELOF1P60002 83 aaKnown RBP13.19□□□□□ -0.3
HOXA11-201ENST00000006015 GVQW2A0A096LPI5 108 aaPredicted RBP13.19□□□□□ -0.3
HOXA11-201ENST00000006015 PRYO14603 147 aa13.16□□□□□ -0.3
HOXA11-201ENST00000006015 IGKV4-1P06312 121 aa13.15□□□□□ -0.3
HOXA11-201ENST00000006015 LYRM9A8MSI8 78 aa13.14□□□□□ -0.31
HOXA11-201ENST00000006015 A0A0U1RQV1 116 aa13.14□□□□□ -0.31
HOXA11-201ENST00000006015 OCR1Q9BZK8 76 aa13.14□□□□□ -0.31
HOXA11-201ENST00000006015 PKIGQ9Y2B9 76 aa13.14□□□□□ -0.31
HOXA11-201ENST00000006015 BRK1Q8WUW1 75 aa13.13□□□□□ -0.31
HOXA11-201ENST00000006015 XAGE1AQ9HD64 81 aa13.13□□□□□ -0.31
HOXA11-201ENST00000006015 C6orf48Q9UBA6 75 aa13.12□□□□□ -0.31
HOXA11-201ENST00000006015 FAM229BQ4G0N7 80 aa13.11□□□□□ -0.31
HOXA11-201ENST00000006015 Q8N9L7 120 aa13.11□□□□□ -0.31
HOXA11-201ENST00000006015 CELA1Q9UNI1 258 aa13.11□□□□□ -0.31
HOXA11-201ENST00000006015 FUSP35637 526 aaKnown RBP eCLIP13.1□□□□□ -0.31
HOXA11-201ENST00000006015 ANK2Q01484 3957 aa13.1□□□□□ -0.31
HOXA11-201ENST00000006015 FLNBO75369 2602 aaKnown RBP13.1□□□□□ -0.31
HOXA11-201ENST00000006015 ESRGQ1W209 222 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 1073 ms